Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-189
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 83

Conread position: 1-375
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 134

Conread position: 1-413
Cow position:
Alignm length: 423
Alignm identity: 271
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 51

Conread position: 1-537
Cow position:
Alignm length: 563
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 1-594
Cow position:
Alignm length: 628
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-683
Cow position:
Alignm length: 711
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-695
Cow position:
Alignm length: 723
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-701
Cow position:
Alignm length: 742
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 17

Conread position: 1-706
Cow position:
Alignm length: 729
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 160

Conread position: 1-707
Cow position:
Alignm length: 749
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 1-707
Cow position:
Alignm length: 742
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 134

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 744
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 134

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 132

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 1-707
Cow position:
Alignm length: 734
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 728
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 43

Conread position: 1-708
Cow position:
Alignm length: 754
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 1-708
Cow position:
Alignm length: 738
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 2-686
Cow position:
Alignm length: 708
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 2-707
Cow position:
Alignm length: 733
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 2-707
Cow position:
Alignm length: 737
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 2-707
Cow position:
Alignm length: 739
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 13

Conread position: 3-702
Cow position:
Alignm length: 748
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 663

Conread position: 5-683
Cow position:
Alignm length: 711
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 105

Conread position: 6-611
Cow position:
Alignm length: 636
Alignm identity: 405
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 113

Conread position: 7-621
Cow position:
Alignm length: 648
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 190

Conread position: 14-659
Cow position:
Alignm length: 667
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 147

Conread position: 15-341
Cow position:
Alignm length: 332
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 118

Conread position: 26-707
Cow position:
Alignm length: 694
Alignm identity: 448
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 141

Conread position: 27-705
Cow position:
Alignm length: 709
Alignm identity: 431
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 90

Conread position: 30-707
Cow position:
Alignm length: 705
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 90

Conread position: 53-708
Cow position:
Alignm length: 689
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 127

Conread position: 102-707
Cow position:
Alignm length: 622
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 127-707
Cow position:
Alignm length: 615
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 128-413
Cow position:
Alignm length: 296
Alignm identity: 193
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 59

Conread position: 128-413
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 66

Conread position: 128-413
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 83

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 614
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 73

Conread position: 128-708
Cow position:
Alignm length: 613
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 133-697
Cow position:
Alignm length: 601
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 138-707
Cow position:
Alignm length: 597
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 138-707
Cow position:
Alignm length: 601
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 142-680
Cow position:
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 368

Conread position: 152-698
Cow position:
Alignm length: 566
Alignm identity: 358
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 194, 70

Conread position: 157-707
Cow position:
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 187

Conread position: 158-680
Cow position:
Alignm length: 547
Alignm identity: 351
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 153, 61

Conread position: 158-682
Cow position:
Alignm length: 536
Alignm identity: 340
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 161, 42

Conread position: 158-706
Cow position:
Alignm length: 556
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 27

Conread position: 158-707
Cow position:
Alignm length: 573
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 158-707
Cow position:
Alignm length: 577
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-708
Cow position:
Alignm length: 582
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 159-707
Cow position:
Alignm length: 578
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 26

Conread position: 159-707
Cow position:
Alignm length: 590
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 159-707
Cow position:
Alignm length: 582
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 161-525
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 194, 153

Conread position: 162-707
Cow position:
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 474

Conread position: 163-613
Cow position:
Alignm length: 477
Alignm identity: 327
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 34

Conread position: 168-707
Cow position:
Alignm length: 560
Alignm identity: 360
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 23, 40

Conread position: 172-436
Cow position:
Alignm length: 274
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 152, 170

Conread position: 172-588
Cow position:
Alignm length: 440
Alignm identity: 287
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 182, 13

Conread position: 172-707
Cow position:
Alignm length: 562
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 37

Conread position: 172-707
Cow position:
Alignm length: 565
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 99

Conread position: 172-707
Cow position:
Alignm length: 566
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 172-708
Cow position:
Alignm length: 556
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 35

Conread position: 172-708
Cow position:
Alignm length: 572
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 181-707
Cow position:
Alignm length: 543
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 35

Conread position: 185-703
Cow position:
Alignm length: 550
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 11

Conread position: 207-707
Cow position:
Alignm length: 530
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 428

Conread position: 207-707
Cow position:
Alignm length: 529
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 207-707
Cow position:
Alignm length: 511
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 86

Conread position: 209-571
Cow position:
Alignm length: 383
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 62

Conread position: 215-413
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 219-707
Cow position:
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 335

Conread position: 225-596
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 238

Conread position: 228-707
Cow position:
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 36

Conread position: 231-621
Cow position:
Alignm length: 414
Alignm identity: 279
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 84, 319

Conread position: 236-573
Cow position:
Alignm length: 358
Alignm identity: 242
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 146

Conread position: 240-569
Cow position:
Alignm length: 353
Alignm identity: 240
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 241-698
Cow position:
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 253-688
Cow position:
Alignm length: 458
Alignm identity: 292
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 6, 33

Conread position: 317-707
Cow position:
Alignm length: 406
Alignm identity: 263
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 162

Conread position: 354-663
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 354-708
Cow position:
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 369-660
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 53

Conread position: 408-698
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 0

Conread position: 409-708
Cow position:
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 89, 104

Conread position: 420-707
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 421-697
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 78, 0

Conread position: 421-707
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 27

Conread position: 421-707
Cow position:
Alignm length: 293
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 421-707
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 421-707
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 421-707
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 107

Conread position: 421-708
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 425-708
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 9, 245

Conread position: 426-703
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 24

Conread position: 446-707
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 130, 53

Conread position: 454-707
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 44, 249

Conread position: 517-688
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 91

Conread position: 540-707
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 97

Conread position: 558-707
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 20

Conread position: 562-707
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 28

Conread position: 564-708
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 571-698
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 571-707
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 0

Show alignments to all cow chromosomes.