Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063H14.5 |
| Conread position: | 1-654 |
| Cow position: | chr10:8996665-8996012 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 472 |
| Conread position: | 2-186 |
| Cow position: | chr10:9031429-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-391 |
| Cow position: | chr10:9010224-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 2-414 |
| Cow position: | chr10:21938980-21938562 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 358, 232 |
| Conread position: | 2-438 |
| Cow position: | chr10:21939064-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 218, 213 |
| Conread position: | 2-581 |
| Cow position: | chr10:8996580-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-641 |
| Cow position: | chr10:9031513-9032132 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 98 |
| Conread position: | 2-652 |
| Cow position: | chr10:8996748-8996098 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-559 |
| Cow position: | chr10:9010391-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 293 |
| Conread position: | 3-652 |
| Cow position: | chr10:8996831-8996182 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 124 |
| Conread position: | 9-321 |
| Cow position: | chr10:9031352-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 200, 194 |
| Conread position: | 9-641 |
| Cow position: | chr10:9010469-9009837 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 528, 539 |
| Conread position: | 12-604 |
| Cow position: | chr10:21939222-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 349 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 448, 0 |
| Conread position: | 12-616 |
| Cow position: | chr10:9010550-9009946 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 17-640 |
| Cow position: | chr10:8996902-8996278 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 50-645 |
| Cow position: | chr10:21939338-21938757 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 354 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 337, 116 |
| Conread position: | 51-619 |
| Cow position: | chr10:9031310-9031860 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 243 |
| Conread position: | 53-489 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 137, 132 |
| Conread position: | 55-614 |
| Cow position: | chr10:9010591-9010032 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 161 |
| Conread position: | 96-633 |
| Cow position: | chr10:21939222-21938687 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 120-653 |
| Cow position: | chr10:8996882-8996349 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-604 |
| Cow position: | chr10:9031187-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 210-653 |
| Cow position: | chr10:9010520-9010077 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 333, 341 |
| Conread position: | 237-616 |
| Cow position: | chr10:9010575-9010198 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 282-641 |
| Cow position: | chr10:8996888-8996529 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 95 |
| Conread position: | 321-641 |
| Cow position: | chr10:8996933-8996613 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 145, 149 |
| Conread position: | 354-640 |
| Cow position: | chr10:9010544-9010258 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 130, 126 |
| Conread position: | 387-652 |
| Cow position: | chr10:9031310-9031575 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-642 |
| Cow position: | chr10:9031228-9031481 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 70 |
Show alignments to all cow chromosomes.