Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-633
Cow position:
Alignm length: 641
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 308

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-175
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-409
Cow position:
Alignm length: 408
Alignm identity: 246
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 414
Alignm identity: 261
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 117, 125

Conread position: 2-473
Cow position:
Alignm length: 475
Alignm identity: 296
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 46

Conread position: 2-496
Cow position:
Alignm length: 498
Alignm identity: 286
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 464, 469

Conread position: 2-528
Cow position:
Alignm length: 533
Alignm identity: 332
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 124, 24

Conread position: 2-612
Cow position:
Alignm length: 617
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 120

Conread position: 2-613
Cow position:
Alignm length: 613
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 129

Conread position: 2-613
Cow position:
Alignm length: 616
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 124

Conread position: 2-616
Cow position:
Alignm length: 617
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 293

Conread position: 2-616
Cow position:
Alignm length: 619
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 43

Conread position: 2-617
Cow position:
Alignm length: 621
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 202

Conread position: 2-619
Cow position:
Alignm length: 621
Alignm identity: 374
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 268, 288

Conread position: 2-620
Cow position:
Alignm length: 622
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 120

Conread position: 2-625
Cow position:
Alignm length: 626
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 365

Conread position: 2-625
Cow position:
Alignm length: 626
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 290

Conread position: 2-626
Cow position:
Alignm length: 629
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 120

Conread position: 2-626
Cow position:
Alignm length: 627
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 165

Conread position: 2-626
Cow position:
Alignm length: 629
Alignm identity: 379
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 218, 208

Conread position: 2-626
Cow position:
Alignm length: 625
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-627
Cow position:
Alignm length: 627
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 450

Conread position: 2-631
Cow position:
Alignm length: 630
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-632
Cow position:
Alignm length: 632
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 2-632
Cow position:
Alignm length: 631
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-632
Cow position:
Alignm length: 636
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 201

Conread position: 2-633
Cow position:
Alignm length: 633
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 302

Conread position: 2-641
Cow position:
Alignm length: 644
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 36

Conread position: 2-641
Cow position:
Alignm length: 642
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 2-641
Cow position:
Alignm length: 642
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 36

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 113

Conread position: 2-641
Cow position:
Alignm length: 643
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 299

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 125

Conread position: 2-648
Cow position:
Alignm length: 655
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 200

Conread position: 2-653
Cow position:
Alignm length: 654
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 2-653
Cow position:
Alignm length: 658
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 2-680
Cow position:
Alignm length: 683
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 469

Conread position: 3-450
Cow position:
Alignm length: 448
Alignm identity: 268
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-454
Cow position:
Alignm length: 453
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 293

Conread position: 3-492
Cow position:
Alignm length: 491
Alignm identity: 286
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 274, 267

Conread position: 3-506
Cow position:
Alignm length: 507
Alignm identity: 304
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 274, 267

Conread position: 3-531
Cow position:
Alignm length: 532
Alignm identity: 329
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 125

Conread position: 3-569
Cow position:
Alignm length: 571
Alignm identity: 347
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 41

Conread position: 3-572
Cow position:
Alignm length: 572
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 290

Conread position: 3-602
Cow position:
Alignm length: 603
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 3-613
Cow position:
Alignm length: 612
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 290

Conread position: 3-613
Cow position:
Alignm length: 615
Alignm identity: 373
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 127

Conread position: 3-613
Cow position:
Alignm length: 615
Alignm identity: 370
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 120, 138

Conread position: 3-614
Cow position:
Alignm length: 614
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 113

Conread position: 3-615
Cow position:
Alignm length: 616
Alignm identity: 358
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 38

Conread position: 3-615
Cow position:
Alignm length: 614
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 454

Conread position: 3-616
Cow position:
Alignm length: 617
Alignm identity: 357
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 387, 397

Conread position: 3-616
Cow position:
Alignm length: 617
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 198

Conread position: 3-617
Cow position:
Alignm length: 617
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 451

Conread position: 3-625
Cow position:
Alignm length: 628
Alignm identity: 368
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 41

Conread position: 3-626
Cow position:
Alignm length: 626
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 59

Conread position: 3-626
Cow position:
Alignm length: 627
Alignm identity: 376
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 278, 290

Conread position: 3-632
Cow position:
Alignm length: 634
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 300

Conread position: 3-640
Cow position:
Alignm length: 639
Alignm identity: 386
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 300, 293

Conread position: 3-641
Cow position:
Alignm length: 640
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 550

Conread position: 3-641
Cow position:
Alignm length: 645
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 65

Conread position: 3-641
Cow position:
Alignm length: 641
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 119

Conread position: 9-499
Cow position:
Alignm length: 493
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 0

Conread position: 9-568
Cow position:
Alignm length: 563
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 461

Conread position: 9-614
Cow position:
Alignm length: 610
Alignm identity: 361
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 110, 118

Conread position: 9-614
Cow position:
Alignm length: 609
Alignm identity: 350
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 380, 373

Conread position: 9-615
Cow position:
Alignm length: 609
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 194

Conread position: 9-616
Cow position:
Alignm length: 612
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 136

Conread position: 9-616
Cow position:
Alignm length: 609
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 64

Conread position: 9-616
Cow position:
Alignm length: 610
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 462

Conread position: 9-616
Cow position:
Alignm length: 610
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 281

Conread position: 9-626
Cow position:
Alignm length: 624
Alignm identity: 380
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 111

Conread position: 9-631
Cow position:
Alignm length: 625
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 447

Conread position: 9-652
Cow position:
Alignm length: 647
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 110

Conread position: 9-653
Cow position:
Alignm length: 648
Alignm identity: 384
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 198, 193

Conread position: 11-577
Cow position:
Alignm length: 568
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 523, 537

Conread position: 11-617
Cow position:
Alignm length: 611
Alignm identity: 359
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 41

Conread position: 11-626
Cow position:
Alignm length: 619
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 117

Conread position: 12-571
Cow position:
Alignm length: 561
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 459

Conread position: 12-616
Cow position:
Alignm length: 607
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 461

Conread position: 13-667
Cow position:
Alignm length: 659
Alignm identity: 396
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 522, 42

Conread position: 18-626
Cow position:
Alignm length: 611
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 272

Conread position: 36-614
Cow position:
Alignm length: 582
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 421

Conread position: 38-641
Cow position:
Alignm length: 609
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 153

Conread position: 38-641
Cow position:
Alignm length: 608
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 158

Conread position: 42-616
Cow position:
Alignm length: 579
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 80

Conread position: 45-490
Cow position:
Alignm length: 449
Alignm identity: 267
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 79

Conread position: 49-634
Cow position:
Alignm length: 587
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 504

Conread position: 50-454
Cow position:
Alignm length: 406
Alignm identity: 259
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 319, 323

Conread position: 50-615
Cow position:
Alignm length: 569
Alignm identity: 333
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 7

Conread position: 50-617
Cow position:
Alignm length: 570
Alignm identity: 326
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 461, 467

Conread position: 51-445
Cow position:
Alignm length: 396
Alignm identity: 232
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 161, 154

Conread position: 51-605
Cow position:
Alignm length: 557
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 67

Conread position: 51-615
Cow position:
Alignm length: 567
Alignm identity: 329
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 466, 88

Conread position: 51-616
Cow position:
Alignm length: 569
Alignm identity: 343
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 80

Conread position: 51-617
Cow position:
Alignm length: 569
Alignm identity: 343
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 79, 84

Conread position: 51-640
Cow position:
Alignm length: 591
Alignm identity: 350
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 415, 422

Conread position: 52-615
Cow position:
Alignm length: 568
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 79

Conread position: 63-618
Cow position:
Alignm length: 557
Alignm identity: 340
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 235, 46

Conread position: 72-617
Cow position:
Alignm length: 548
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 126

Conread position: 122-653
Cow position:
Alignm length: 534
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 330

Conread position: 122-654
Cow position:
Alignm length: 536
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 158

Conread position: 142-400
Cow position:
Alignm length: 259
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 144-625
Cow position:
Alignm length: 483
Alignm identity: 294
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 393, 404

Conread position: 145-632
Cow position:
Alignm length: 490
Alignm identity: 296
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 46

Conread position: 151-580
Cow position:
Alignm length: 431
Alignm identity: 274
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 303, 309

Conread position: 181-622
Cow position:
Alignm length: 443
Alignm identity: 273
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 373, 48

Conread position: 217-616
Cow position:
Alignm length: 402
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 81

Conread position: 238-631
Cow position:
Alignm length: 396
Alignm identity: 250
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 228, 218

Conread position: 238-643
Cow position:
Alignm length: 408
Alignm identity: 260
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 55

Conread position: 241-626
Cow position:
Alignm length: 388
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 35

Conread position: 294-625
Cow position:
Alignm length: 336
Alignm identity: 215
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 73, 78

Conread position: 297-616
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 70

Conread position: 307-626
Cow position:
Alignm length: 321
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 81, 76

Conread position: 312-636
Cow position:
Alignm length: 328
Alignm identity: 203
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 157, 144

Conread position: 312-652
Cow position:
Alignm length: 342
Alignm identity: 213
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 243, 232

Conread position: 315-640
Cow position:
Alignm length: 328
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 68

Conread position: 386-613
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 155, 150

Conread position: 387-626
Cow position:
Alignm length: 241
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 166

Show alignments to all cow chromosomes.