Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-233
Cow position: chr18:42837332-42837100 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-244
Cow position: chr18:40075459-40075702 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-367
Cow position: chr18:51839209-51838843 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 38

Conread position: 1-425
Cow position: chr18:14453752-14453325 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 410, 0

Conread position: 1-453
Cow position: chr18:42827504-42827961 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 286
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 408, 0

Conread position: 1-529
Cow position: chr18:51765478-51764949 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 317
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 525, 0

Conread position: 1-567
Cow position: chr18:50099831-50100394 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 346
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 42

Conread position: 1-568
Cow position: chr18:50281774-50282341 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 342
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 43

Conread position: 1-602
Cow position: chr18:50059103-50058502 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 1-608
Cow position: chr18:50049123-50048516 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 1-612
Cow position: chr18:50271561-50272171 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 43

Conread position: 1-614
Cow position: chr18:49022412-49023023 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 166

Conread position: 1-614
Cow position: chr18:50059271-50058658 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 1-615
Cow position: chr18:50022387-50021770 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 378
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 173, 180

Conread position: 1-616
Cow position: chr18:50083382-50083997 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 43

Conread position: 1-616
Cow position: chr18:54979407-54980023 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 449

Conread position: 1-616
Cow position: chr18:56330171-56329556 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 293

Conread position: 1-627
Cow position: chr18:50099075-50099702 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 1-636
Cow position: chr18:51874079-51874707 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 80

Conread position: 1-641
Cow position: chr18:42675389-42674749 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 450

Conread position: 1-645
Cow position: chr18:53610451-53609807 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 292

Conread position: 1-652
Cow position: chr18:50022135-50021478 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 404
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 109

Conread position: 1-652
Cow position: chr18:50022303-50021646 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 409
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 45

Conread position: 1-653
Cow position: chr18:50048619-50047979 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 404
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 198, 204

Conread position: 1-654
Cow position: chr18:43175508-43174855 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 241

Conread position: 1-699
Cow position: chr18:33093090-33092392 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 275

Conread position: 2-158
Cow position: chr18:44397666-44397510 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-169
Cow position: chr18:14453019-14452852 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-274
Cow position: chr18:53586310-53586038 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-280
Cow position: chr18:50295625-50295902 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 110

Conread position: 2-304
Cow position: chr18:56494197-56494499 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 39

Conread position: 2-308
Cow position: chr18:52428742-52429048 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 2-331
Cow position: chr18:52011838-52011506 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 121

Conread position: 2-332
Cow position: chr18:53635187-53634859 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 2-334
Cow position: chr18:14453187-14452855 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 288

Conread position: 2-400
Cow position: chr18:43168145-43168543 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 291

Conread position: 2-403
Cow position: chr18:14453271-14452870 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 274

Conread position: 2-403
Cow position: chr18:40306942-40307343 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 256
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 279, 291

Conread position: 2-404
Cow position: chr18:52433923-52434324 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 251
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 330, 308

Conread position: 2-405
Cow position: chr18:43022382-43021979 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-405
Cow position: chr18:44240446-44240849 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 292

Conread position: 2-406
Cow position: chr18:42837499-42837095 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-444
Cow position: chr18:43119886-43119445 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 0

Conread position: 2-445
Cow position: chr18:43048711-43048270 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 391

Conread position: 2-451
Cow position: chr18:51839292-51838843 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 121

Conread position: 2-453
Cow position: chr18:50849024-50849475 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 277
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 36

Conread position: 2-467
Cow position: chr18:43119970-43119505 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-477
Cow position: chr18:43168061-43168536 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-486
Cow position: chr18:43022466-43021982 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 2-504
Cow position: chr18:44184449-44183947 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-505
Cow position: chr18:42792409-42792912 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 313
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 52

Conread position: 2-506
Cow position: chr18:33064081-33063576 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 43

Conread position: 2-511
Cow position: chr18:1418103-1418612 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 2-529
Cow position: chr18:50246346-50246870 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 42

Conread position: 2-529
Cow position: chr18:51367746-51367218 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 322
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 27

Conread position: 2-534
Cow position: chr18:40324447-40323916 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 0

Conread position: 2-542
Cow position: chr18:42959946-42959415 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 112

Conread position: 2-573
Cow position: chr18:41948827-41948258 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 469

Conread position: 2-573
Cow position: chr18:42985039-42984468 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-573
Cow position: chr18:55008828-55009398 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 351
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 43, 50

Conread position: 2-577
Cow position: chr18:44398086-44397511 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-579
Cow position: chr18:56247628-56247061 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 2-581
Cow position: chr18:42744364-42743785 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-582
Cow position: chr18:41198180-41198760 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-582
Cow position: chr18:44184533-44183953 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 200

Conread position: 2-583
Cow position: chr18:1418019-1418600 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 537, 531

Conread position: 2-588
Cow position: chr18:50021963-50021374 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 367
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 27, 60

Conread position: 2-591
Cow position: chr18:42674968-42674381 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 202

Conread position: 2-593
Cow position: chr18:14453919-14453325 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 292

Conread position: 2-593
Cow position: chr18:43175087-43174496 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 200

Conread position: 2-595
Cow position: chr18:51400633-51401226 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 141

Conread position: 2-602
Cow position: chr18:51752066-51751470 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 352

Conread position: 2-603
Cow position: chr18:44253299-44252709 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 2-604
Cow position: chr18:51765813-51765211 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 361
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 302, 273

Conread position: 2-607
Cow position: chr18:51765897-51765292 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 458

Conread position: 2-608
Cow position: chr18:44253538-44252946 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 165

Conread position: 2-608
Cow position: chr18:52428406-52429011 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 524, 532

Conread position: 2-608
Cow position: chr18:52433587-52434192 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 524, 532

Conread position: 2-608
Cow position: chr18:53509339-53509945 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 546

Conread position: 2-609
Cow position: chr18:50099328-50099935 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 42

Conread position: 2-609
Cow position: chr18:52447293-52447900 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 2-612
Cow position: chr18:50083467-50084077 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 110

Conread position: 2-612
Cow position: chr18:50246010-50246620 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 38

Conread position: 2-613
Cow position: chr18:40324867-40324256 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 539, 532

Conread position: 2-613
Cow position: chr18:50048870-50048265 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 384
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 36

Conread position: 2-613
Cow position: chr18:50098992-50099603 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 376

Conread position: 2-613
Cow position: chr18:50250936-50251543 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 2-613
Cow position: chr18:50848856-50849467 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 216

Conread position: 2-613
Cow position: chr18:51752234-51751623 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 118

Conread position: 2-613
Cow position: chr18:51839544-51838933 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 292

Conread position: 2-613
Cow position: chr18:51969358-51969958 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 0

Conread position: 2-613
Cow position: chr18:52427734-52428345 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 375

Conread position: 2-613
Cow position: chr18:52447629-52448240 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-613
Cow position: chr18:55017981-55018592 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 42

Conread position: 2-614
Cow position: chr18:42675136-42674524 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 197

Conread position: 2-614
Cow position: chr18:42792241-42792853 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-614
Cow position: chr18:50022047-50021432 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 2-614
Cow position: chr18:50099664-50100276 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 2-614
Cow position: chr18:50246178-50246790 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 38

Conread position: 2-615
Cow position: chr18:42790981-42791594 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 129

Conread position: 2-615
Cow position: chr18:42791233-42791846 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 288

Conread position: 2-615
Cow position: chr18:49033113-49032500 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 453

Conread position: 2-615
Cow position: chr18:50246094-50246707 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 2-615
Cow position: chr18:50848352-50848965 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 126

Conread position: 2-615
Cow position: chr18:51789288-51788675 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 201

Conread position: 2-615
Cow position: chr18:52012342-52011729 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 292

Conread position: 2-615
Cow position: chr18:53497989-53498602 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 26

Conread position: 2-615
Cow position: chr18:53635859-53635246 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 455

Conread position: 2-615
Cow position: chr18:53636111-53635498 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 2-615
Cow position: chr18:56128054-56128667 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 368
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 35

Conread position: 2-615
Cow position: chr18:56316066-56316679 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 369
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 125

Conread position: 2-616
Cow position: chr18:40324531-40323918 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 287

Conread position: 2-616
Cow position: chr18:40324615-40324001 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-616
Cow position: chr18:43175339-43174725 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 453

Conread position: 2-616
Cow position: chr18:44240194-44240808 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 198

Conread position: 2-616
Cow position: chr18:44398170-44397556 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 452

Conread position: 2-616
Cow position: chr18:50083551-50084165 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 110

Conread position: 2-616
Cow position: chr18:52447461-52448075 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 179

Conread position: 2-616
Cow position: chr18:53525793-53526407 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-616
Cow position: chr18:53560195-53560805 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 197

Conread position: 2-616
Cow position: chr18:56247796-56247190 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 124

Conread position: 2-617
Cow position: chr18:14454003-14453388 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-617
Cow position: chr18:40086835-40086218 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 60

Conread position: 2-617
Cow position: chr18:41197760-41198375 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 210

Conread position: 2-617
Cow position: chr18:41197844-41198459 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 311

Conread position: 2-617
Cow position: chr18:43120138-43119523 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 214

Conread position: 2-617
Cow position: chr18:50048786-50048177 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 2-617
Cow position: chr18:50049210-50048591 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 187

Conread position: 2-617
Cow position: chr18:51812615-51812000 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 129

Conread position: 2-617
Cow position: chr18:51969442-51970046 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 167

Conread position: 2-617
Cow position: chr18:52446957-52447572 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 119

Conread position: 2-618
Cow position: chr18:50848436-50849052 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 233

Conread position: 2-618
Cow position: chr18:51765561-51764945 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 375
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 113

Conread position: 2-618
Cow position: chr18:51812531-51811915 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 201

Conread position: 2-619
Cow position: chr18:51969124-51969721 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 2-620
Cow position: chr18:44239774-44240392 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 206

Conread position: 2-621
Cow position: chr18:33064837-33064218 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 190

Conread position: 2-625
Cow position: chr18:51400549-51401172 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 294

Conread position: 2-625
Cow position: chr18:53586982-53586359 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 2-626
Cow position: chr18:42791065-42791689 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 128

Conread position: 2-626
Cow position: chr18:43175171-43174547 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 515, 509

Conread position: 2-626
Cow position: chr18:49032693-49032069 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 539, 535

Conread position: 2-626
Cow position: chr18:50083803-50084429 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 2-626
Cow position: chr18:51789456-51788832 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 2-626
Cow position: chr18:51812699-51812075 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 202

Conread position: 2-631
Cow position: chr18:51789876-51789247 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-632
Cow position: chr18:51789540-51788910 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 271

Conread position: 2-632
Cow position: chr18:51812783-51812153 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 271

Conread position: 2-632
Cow position: chr18:56434146-56434775 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 218

Conread position: 2-633
Cow position: chr18:40086329-40085707 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 113

Conread position: 2-633
Cow position: chr18:43093653-43093022 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 117

Conread position: 2-633
Cow position: chr18:43175591-43174960 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 227

Conread position: 2-633
Cow position: chr18:44153931-44153318 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 391
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 526, 35

Conread position: 2-633
Cow position: chr18:56330086-56329455 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 202

Conread position: 2-634
Cow position: chr18:51368501-51367869 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 271

Conread position: 2-635
Cow position: chr18:33064501-33063868 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 113

Conread position: 2-636
Cow position: chr18:53586814-53586180 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 2-640
Cow position: chr18:40306270-40306908 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 383

Conread position: 2-640
Cow position: chr18:42985207-42984569 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-640
Cow position: chr18:43022970-43022332 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 546, 540

Conread position: 2-640
Cow position: chr18:43093485-43092847 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 291

Conread position: 2-640
Cow position: chr18:43093977-43093351 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 249

Conread position: 2-640
Cow position: chr18:44184869-44184231 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 291

Conread position: 2-640
Cow position: chr18:52447377-52448015 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-640
Cow position: chr18:52447545-52448183 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 179

Conread position: 2-641
Cow position: chr18:33065005-33064366 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 2-641
Cow position: chr18:40086413-40085784 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 203

Conread position: 2-641
Cow position: chr18:40086919-40086278 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 2-641
Cow position: chr18:40324699-40324060 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 459

Conread position: 2-641
Cow position: chr18:41197928-41198567 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 233

Conread position: 2-641
Cow position: chr18:41198012-41198651 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:41198096-41198735 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:41949079-41948440 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:41949247-41948608 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:41949331-41948692 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 198

Conread position: 2-641
Cow position: chr18:42675220-42674581 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 449

Conread position: 2-641
Cow position: chr18:42675304-42674665 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 209

Conread position: 2-641
Cow position: chr18:42744448-42743809 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 294

Conread position: 2-641
Cow position: chr18:42744616-42743977 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 449

Conread position: 2-641
Cow position: chr18:42744700-42744061 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:42837751-42837112 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:42837835-42837196 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 449

Conread position: 2-641
Cow position: chr18:42837919-42837280 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 203

Conread position: 2-641
Cow position: chr18:42985375-42984736 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 2-641
Cow position: chr18:42985543-42984904 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 129

Conread position: 2-641
Cow position: chr18:43022802-43022163 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 450

Conread position: 2-641
Cow position: chr18:43022886-43022247 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 373

Conread position: 2-641
Cow position: chr18:43120390-43119751 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 189

Conread position: 2-641
Cow position: chr18:43175423-43174784 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:44184785-44184146 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 198

Conread position: 2-641
Cow position: chr18:44239858-44240497 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 546, 540

Conread position: 2-641
Cow position: chr18:44239942-44240581 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 373

Conread position: 2-641
Cow position: chr18:44254038-44253403 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 137

Conread position: 2-641
Cow position: chr18:44398338-44397699 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 512

Conread position: 2-641
Cow position: chr18:44398422-44397783 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:51765645-51765006 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 198

Conread position: 2-641
Cow position: chr18:51766065-51765426 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 525, 531

Conread position: 2-641
Cow position: chr18:51812867-51812228 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 381

Conread position: 2-641
Cow position: chr18:52427818-52428457 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 291

Conread position: 2-641
Cow position: chr18:52427902-52428541 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:52427986-52428625 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 111

Conread position: 2-641
Cow position: chr18:52428070-52428709 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 291

Conread position: 2-641
Cow position: chr18:52428154-52428793 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 197

Conread position: 2-641
Cow position: chr18:52428238-52428877 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 111

Conread position: 2-641
Cow position: chr18:52433083-52433722 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:52433167-52433806 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position: chr18:52433251-52433890 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 447

Conread position: 2-641
Cow position: chr18:52433335-52433974 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 447

Conread position: 2-641
Cow position: chr18:52433419-52434058 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 111

Conread position: 2-641
Cow position: chr18:52447125-52447764 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 122

Conread position: 2-641
Cow position: chr18:52447713-52448353 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 179

Conread position: 2-642
Cow position: chr18:1417851-1418491 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-648
Cow position: chr18:42960282-42959645 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 452

Conread position: 2-648
Cow position: chr18:44184617-44183971 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 199

Conread position: 2-648
Cow position: chr18:51368333-51367688 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 612, 537

Conread position: 2-652
Cow position: chr18:43120222-43119572 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position: chr18:40324783-40324132 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 198

Conread position: 2-653
Cow position: chr18:42744532-42743881 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position: chr18:42791401-42792052 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 292

Conread position: 2-653
Cow position: chr18:42791653-42792304 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 292

Conread position: 2-653
Cow position: chr18:42960114-42959472 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 121

Conread position: 2-653
Cow position: chr18:42985123-42984472 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 113

Conread position: 2-653
Cow position: chr18:43022634-43021983 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 289

Conread position: 2-653
Cow position: chr18:43023054-43022403 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 458

Conread position: 2-653
Cow position: chr18:43093893-43093254 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 124

Conread position: 2-653
Cow position: chr18:44253622-44252985 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 122

Conread position: 2-653
Cow position: chr18:44253790-44253152 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 0

Conread position: 2-653
Cow position: chr18:50295205-50295856 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 112

Conread position: 2-653
Cow position: chr18:51367997-51367347 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 190

Conread position: 2-653
Cow position: chr18:52428322-52428973 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 2-653
Cow position: chr18:52433503-52434154 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 629, 622

Conread position: 2-654
Cow position: chr18:42694031-42693379 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 387
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 134, 129

Conread position: 2-654
Cow position: chr18:43022718-43022066 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 290

Conread position: 2-654
Cow position: chr18:44240110-44240762 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 120

Conread position: 2-654
Cow position: chr18:51838769-51838128 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 376
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 170, 161

Conread position: 2-655
Cow position: chr18:43093401-43092750 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 209

Conread position: 2-659
Cow position: chr18:44154437-44153782 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 127

Conread position: 2-659
Cow position: chr18:50099916-50100560 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 406
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 39

Conread position: 2-659
Cow position: chr18:50271478-50272135 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 125

Conread position: 2-660
Cow position: chr18:42675052-42674394 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 121

Conread position: 2-660
Cow position: chr18:54967889-54968547 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 406
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 42

Conread position: 2-680
Cow position: chr18:41197592-41198271 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 648, 669

Conread position: 2-680
Cow position: chr18:43093569-43092890 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 290

Conread position: 2-680
Cow position: chr18:50848604-50849283 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 218

Conread position: 2-680
Cow position: chr18:51368586-51367906 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 462

Conread position: 2-690
Cow position: chr18:52447797-52448482 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 615

Conread position: 3-169
Cow position: chr18:43053357-43053191 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-317
Cow position: chr18:40075377-40075691 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 32

Conread position: 3-407
Cow position: chr18:56329245-56328841 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-424
Cow position: chr18:55066756-55066335 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 258
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-445
Cow position: chr18:49022832-49023274 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-484
Cow position: chr18:51765392-51764911 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 302
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 38

Conread position: 3-493
Cow position: chr18:40306859-40307349 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 114

Conread position: 3-499
Cow position: chr18:53635354-53634860 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 291

Conread position: 3-499
Cow position: chr18:56128811-56129305 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 291

Conread position: 3-505
Cow position: chr18:55018402-55018903 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 302
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 327, 452

Conread position: 3-517
Cow position: chr18:53586393-53585879 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 322
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 281, 290

Conread position: 3-533
Cow position: chr18:33092836-33092312 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 338
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 99

Conread position: 3-568
Cow position: chr18:56316403-56316968 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 333
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-573
Cow position: chr18:44240279-44240849 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 119

Conread position: 3-578
Cow position: chr18:55497604-55497029 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 327
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 288, 265

Conread position: 3-579
Cow position: chr18:43167978-43168554 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-586
Cow position: chr18:56316151-56316734 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 3-604
Cow position: chr18:42693862-42693261 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 366
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 184, 193

Conread position: 3-604
Cow position: chr18:49021504-49022103 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 350
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 51

Conread position: 3-605
Cow position: chr18:42827422-42828027 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 214

Conread position: 3-608
Cow position: chr18:49032776-49032171 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 543, 534

Conread position: 3-608
Cow position: chr18:54993090-54993695 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 194

Conread position: 3-611
Cow position: chr18:52012173-52011565 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 3-613
Cow position: chr18:51367828-51367219 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 19

Conread position: 3-613
Cow position: chr18:52432916-52433526 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-613
Cow position: chr18:54967806-54968414 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 124

Conread position: 3-613
Cow position: chr18:54979662-54980272 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 3-613
Cow position: chr18:54979998-54980607 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 194

Conread position: 3-613
Cow position: chr18:55018234-55018846 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 116

Conread position: 3-614
Cow position: chr18:50099581-50100192 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 3-615
Cow position: chr18:33093004-33092398 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 128

Conread position: 3-615
Cow position: chr18:40306523-40307135 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 284

Conread position: 3-615
Cow position: chr18:50059437-50058825 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 291

Conread position: 3-615
Cow position: chr18:55523410-55524022 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 206

Conread position: 3-615
Cow position: chr18:56493946-56494556 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-616
Cow position: chr18:1417936-1418549 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 3-616
Cow position: chr18:49022246-49022857 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 371
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 450, 348

Conread position: 3-616
Cow position: chr18:53525878-53526489 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 122

Conread position: 3-616
Cow position: chr18:53560028-53560641 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 291

Conread position: 3-616
Cow position: chr18:55008661-55009274 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 3-616
Cow position: chr18:56329749-56329136 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 534

Conread position: 3-616
Cow position: chr18:56493775-56494391 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 294

Conread position: 3-617
Cow position: chr18:50848689-50849303 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 481

Conread position: 3-617
Cow position: chr18:51789371-51788757 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 128

Conread position: 3-617
Cow position: chr18:52012257-52011643 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 449

Conread position: 3-621
Cow position: chr18:33064668-33064050 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 110

Conread position: 3-622
Cow position: chr18:49032608-49031989 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-622
Cow position: chr18:53509424-53510042 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 122

Conread position: 3-625
Cow position: chr18:33065088-33064466 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 3-625
Cow position: chr18:40074957-40075579 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 156

Conread position: 3-625
Cow position: chr18:55017898-55018520 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 125

Conread position: 3-626
Cow position: chr18:42960029-42959415 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 212

Conread position: 3-627
Cow position: chr18:41948910-41948288 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 584, 0

Conread position: 3-632
Cow position: chr18:44398253-44397624 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-632
Cow position: chr18:51812950-51812321 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-633
Cow position: chr18:49033196-49032566 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 128

Conread position: 3-636
Cow position: chr18:41949162-41948529 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-640
Cow position: chr18:40306439-40307076 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 208

Conread position: 3-640
Cow position: chr18:41197509-41198146 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 372

Conread position: 3-640
Cow position: chr18:41197677-41198314 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 204

Conread position: 3-640
Cow position: chr18:49022330-49022965 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 182

Conread position: 3-640
Cow position: chr18:49032944-49032307 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 531, 544

Conread position: 3-640
Cow position: chr18:49033280-49032643 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 534

Conread position: 3-640
Cow position: chr18:53586645-53586008 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-641
Cow position: chr18:33064332-33063694 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 3-641
Cow position: chr18:40306187-40306825 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 273

Conread position: 3-641
Cow position: chr18:40306691-40307329 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 293

Conread position: 3-641
Cow position: chr18:43175254-43174616 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 597, 592

Conread position: 3-641
Cow position: chr18:43175665-43175036 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-641
Cow position: chr18:44240027-44240665 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 365

Conread position: 3-641
Cow position: chr18:44254121-44253487 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 201

Conread position: 3-641
Cow position: chr18:50848185-50848823 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 460

Conread position: 3-641
Cow position: chr18:51789791-51789153 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-641
Cow position: chr18:51813034-51812396 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 201

Conread position: 3-641
Cow position: chr18:52427567-52428205 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 446

Conread position: 3-641
Cow position: chr18:52427651-52428289 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 289

Conread position: 3-641
Cow position: chr18:52433000-52433638 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 289

Conread position: 3-641
Cow position: chr18:54967221-54967856 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 128

Conread position: 3-641
Cow position: chr18:54979830-54980468 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 49

Conread position: 3-641
Cow position: chr18:55008577-55009215 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 125

Conread position: 3-641
Cow position: chr18:56128391-56129029 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 372

Conread position: 3-648
Cow position: chr18:41948994-41948349 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 449

Conread position: 3-652
Cow position: chr18:56433989-56434628 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 394
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 282, 34

Conread position: 3-653
Cow position: chr18:44253873-44253236 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 240

Conread position: 3-653
Cow position: chr18:51400298-51400948 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 452

Conread position: 3-653
Cow position: chr18:56329497-56328847 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 453

Conread position: 3-667
Cow position: chr18:33064584-33063918 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 448

Conread position: 3-667
Cow position: chr18:51400382-51401048 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 451

Conread position: 3-667
Cow position: chr18:54993174-54993840 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 112

Conread position: 3-697
Cow position: chr18:33064248-33063552 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 110

Conread position: 3-716
Cow position: chr18:53635774-53635055 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 373

Conread position: 4-488
Cow position: chr18:53498496-53498980 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 301
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 110, 42

Conread position: 4-613
Cow position: chr18:50848105-50848711 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 31

Conread position: 4-617
Cow position: chr18:52447211-52447824 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-631
Cow position: chr18:51813114-51812490 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 58

Conread position: 4-641
Cow position: chr18:42675470-42674833 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 532, 539

Conread position: 4-641
Cow position: chr18:42675551-42674917 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 5-173
Cow position: chr18:43053439-43053271 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-618
Cow position: chr18:42790900-42791513 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 5-626
Cow position: chr18:44253951-44253335 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 5-627
Cow position: chr18:43094219-43093616 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 5-632
Cow position: chr18:51789705-51789078 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 5-641
Cow position: chr18:40324945-40324312 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 66

Conread position: 6-640
Cow position: chr18:49022667-49023301 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 9-220
Cow position: chr18:55075112-55075324 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 165, 0

Conread position: 9-443
Cow position: chr18:53610107-53609674 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 275
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 191, 202

Conread position: 9-463
Cow position: chr18:49032434-49031980 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-501
Cow position: chr18:52011999-52011504 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 311
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 25

Conread position: 9-509
Cow position: chr18:55066834-55066334 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 227

Conread position: 9-529
Cow position: chr18:56128733-56129252 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 105

Conread position: 9-569
Cow position: chr18:22634664-22635224 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 345
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 106

Conread position: 9-576
Cow position: chr18:40306781-40307348 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 188

Conread position: 9-579
Cow position: chr18:54967980-54968548 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 341
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 51

Conread position: 9-580
Cow position: chr18:40075131-40075702 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 145

Conread position: 9-589
Cow position: chr18:42792332-42792912 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 104

Conread position: 9-589
Cow position: chr18:54993516-54994094 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 358
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 207, 188

Conread position: 9-594
Cow position: chr18:55523752-55524337 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 99

Conread position: 9-601
Cow position: chr18:53586471-53585879 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 9-604
Cow position: chr18:53525716-53526311 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 9-607
Cow position: chr18:55523332-55523930 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 9-608
Cow position: chr18:53509262-53509861 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 9-608
Cow position: chr18:56433492-56434089 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 361
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 118

Conread position: 9-613
Cow position: chr18:53635600-53634996 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 586, 567

Conread position: 9-613
Cow position: chr18:54967059-54967663 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 119

Conread position: 9-613
Cow position: chr18:54993012-54993616 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 9-613
Cow position: chr18:56434237-56434840 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 368
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 127

Conread position: 9-615
Cow position: chr18:42791156-42791762 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 446

Conread position: 9-615
Cow position: chr18:42791576-42792182 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-615
Cow position: chr18:49032854-49032248 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 99

Conread position: 9-615
Cow position: chr18:49033358-49032752 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-615
Cow position: chr18:50049031-50048425 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 118

Conread position: 9-615
Cow position: chr18:50083222-50083828 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 367
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 74, 57

Conread position: 9-615
Cow position: chr18:50083306-50083912 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 531, 539

Conread position: 9-615
Cow position: chr18:50099419-50100025 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 9-615
Cow position: chr18:53610527-53609921 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 378
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 127, 115

Conread position: 9-615
Cow position: chr18:56128313-56128919 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 461

Conread position: 9-615
Cow position: chr18:56128565-56129171 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 595, 567

Conread position: 9-616
Cow position: chr18:56329575-56328968 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 447

Conread position: 9-617
Cow position: chr18:50059599-50058991 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 281

Conread position: 9-626
Cow position: chr18:50848527-50849144 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 281

Conread position: 9-631
Cow position: chr18:42791324-42791946 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 9-631
Cow position: chr18:56329911-56329289 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 117

Conread position: 9-636
Cow position: chr18:53610359-53609732 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 374
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 294, 277

Conread position: 9-640
Cow position: chr18:53586891-53586260 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 285

Conread position: 9-640
Cow position: chr18:55067002-55066371 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 118

Conread position: 9-640
Cow position: chr18:55067086-55066455 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 9-641
Cow position: chr18:43093727-43093098 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 53

Conread position: 9-641
Cow position: chr18:54979584-54980216 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 119

Conread position: 9-641
Cow position: chr18:54992928-54993560 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 136

Conread position: 9-641
Cow position: chr18:55018156-55018789 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 259

Conread position: 9-641
Cow position: chr18:56128481-56129113 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 130

Conread position: 9-647
Cow position: chr18:56493868-56494506 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 447

Conread position: 9-648
Cow position: chr18:40075047-40075686 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 66

Conread position: 9-652
Cow position: chr18:50281698-50282341 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 103

Conread position: 9-653
Cow position: chr18:50059179-50058535 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 9-653
Cow position: chr18:53498161-53498808 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 9-659
Cow position: chr18:42693688-42693039 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 374
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 272, 285

Conread position: 9-663
Cow position: chr18:53560118-53560775 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 284

Conread position: 9-667
Cow position: chr18:53587059-53586399 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 279

Conread position: 9-667
Cow position: chr18:54967395-54968050 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 9-667
Cow position: chr18:54992844-54993504 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 19

Conread position: 9-680
Cow position: chr18:51400472-51401144 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 207

Conread position: 10-607
Cow position: chr18:54992761-54993358 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 106

Conread position: 10-608
Cow position: chr18:22634587-22635179 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 362
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 156, 29

Conread position: 10-613
Cow position: chr18:40306614-40307217 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 10-613
Cow position: chr18:42792081-42792684 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-613
Cow position: chr18:50848276-50848879 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 10-614
Cow position: chr18:50295297-50295900 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 113

Conread position: 10-615
Cow position: chr18:42791829-42792434 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 445

Conread position: 10-616
Cow position: chr18:53498336-53498940 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 10-616
Cow position: chr18:56316242-56316848 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 363
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 519, 513

Conread position: 10-640
Cow position: chr18:42791997-42792627 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 285

Conread position: 10-640
Cow position: chr18:55523501-55524131 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 99

Conread position: 10-641
Cow position: chr18:55017821-55018449 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 117

Conread position: 10-645
Cow position: chr18:55018073-55018708 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 215

Conread position: 10-652
Cow position: chr18:43167901-43168543 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 175

Conread position: 10-659
Cow position: chr18:53559951-53560602 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 285

Conread position: 11-175
Cow position: chr18:43174658-43174494 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 11-427
Cow position: chr18:42792502-42792918 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 253
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 11-608
Cow position: chr18:54993350-54993945 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 186

Conread position: 11-614
Cow position: chr18:50048945-50048342 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 11-617
Cow position: chr18:51789948-51789345 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 57

Conread position: 11-640
Cow position: chr18:56329657-56329028 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 461

Conread position: 11-653
Cow position: chr18:52446728-52447356 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 21

Conread position: 11-667
Cow position: chr18:54979502-54980160 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 189

Conread position: 11-685
Cow position: chr18:51839451-51838778 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 669, 0

Conread position: 12-277
Cow position: chr18:50030704-50030436 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 12-336
Cow position: chr18:56247374-56247054 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 223, 0

Conread position: 12-607
Cow position: chr18:50848782-50849377 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 12-614
Cow position: chr18:50031123-50030519 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 367
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 110, 102

Conread position: 12-614
Cow position: chr18:50083645-50084247 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 12-614
Cow position: chr18:56329992-56329390 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 541

Conread position: 12-625
Cow position: chr18:54966978-54967591 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 189

Conread position: 12-626
Cow position: chr18:42792167-42792781 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 278

Conread position: 12-636
Cow position: chr18:53587140-53586516 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 377
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 43

Conread position: 12-636
Cow position: chr18:56329404-56328776 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 564, 0

Conread position: 12-640
Cow position: chr18:56329824-56329196 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 12-641
Cow position: chr18:42791495-42792124 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 12-641
Cow position: chr18:43120296-43119667 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 517, 510

Conread position: 12-641
Cow position: chr18:51765971-51765342 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 202

Conread position: 12-652
Cow position: chr18:43167819-43168459 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 169

Conread position: 12-653
Cow position: chr18:42791915-42792556 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 13-403
Cow position: chr18:49022926-49023316 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 247
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 330, 342

Conread position: 13-613
Cow position: chr18:49022590-49023190 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 540, 531

Conread position: 13-615
Cow position: chr18:50098919-50099521 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 15-614
Cow position: chr18:43167739-43168337 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 28

Conread position: 15-623
Cow position: chr18:42694102-42693493 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 354
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 116

Conread position: 17-667
Cow position: chr18:44398490-44397839 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 18-451
Cow position: chr18:51367646-51367213 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 269
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 18-617
Cow position: chr18:55017748-55018344 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 32

Conread position: 18-652
Cow position: chr18:50059674-50059040 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 24-336
Cow position: chr18:43053507-43053192 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 24-615
Cow position: chr18:56316004-56316595 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 24-619
Cow position: chr18:52012486-52011893 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 31-615
Cow position: chr18:42790842-42791426 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 31-616
Cow position: chr18:43023109-43022524 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-641
Cow position: chr18:44184924-44184314 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 432

Conread position: 31-667
Cow position: chr18:53559806-53560442 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 9

Conread position: 32-653
Cow position: chr18:50059746-50059123 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 371
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 424

Conread position: 35-622
Cow position: chr18:44154488-44153899 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 166

Conread position: 35-641
Cow position: chr18:40086970-40086362 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 79

Conread position: 35-655
Cow position: chr18:51874029-51874642 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 130

Conread position: 37-616
Cow position: chr18:44239725-44240304 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 89

Conread position: 37-633
Cow position: chr18:42744746-42744153 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 37-648
Cow position: chr18:42837968-42837357 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 256

Conread position: 37-654
Cow position: chr18:41949380-41948763 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-581
Cow position: chr18:49021620-49022164 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 329
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 459, 477

Conread position: 39-519
Cow position: chr18:51970310-51970782 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 291
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 148, 63

Conread position: 42-613
Cow position: chr18:50031009-50030436 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 354
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 168, 78

Conread position: 43-613
Cow position: chr18:52427523-52428093 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-633
Cow position: chr18:52432872-52433462 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 45-615
Cow position: chr18:50049251-50048677 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 336

Conread position: 45-641
Cow position: chr18:22634534-22635128 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 362
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 40, 82

Conread position: 47-641
Cow position: chr18:42960483-42959895 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 49-607
Cow position: chr18:44253336-44252789 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 206

Conread position: 49-641
Cow position: chr18:14454040-14453448 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 403

Conread position: 50-379
Cow position: chr18:42959739-42959410 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 50-579
Cow position: chr18:50246310-50246839 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 92

Conread position: 50-615
Cow position: chr18:1417815-1418380 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 161

Conread position: 50-615
Cow position: chr18:55008792-55009355 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 350
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 85

Conread position: 50-616
Cow position: chr18:42827385-42827956 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 524, 0

Conread position: 50-641
Cow position: chr18:50245974-50246565 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 64

Conread position: 50-642
Cow position: chr18:56248176-56247576 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 12

Conread position: 50-680
Cow position: chr18:50059306-50058675 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 338

Conread position: 51-585
Cow position: chr18:50099797-50100331 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 51-596
Cow position: chr18:51752269-51751724 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 51-607
Cow position: chr18:56434363-56434919 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 337
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 235, 245

Conread position: 51-615
Cow position: chr18:50271443-50272007 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 145

Conread position: 51-616
Cow position: chr18:49032980-49032415 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 404

Conread position: 51-618
Cow position: chr18:55523710-55524277 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 242

Conread position: 51-625
Cow position: chr18:40074921-40075495 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 242

Conread position: 51-632
Cow position: chr18:54979374-54979955 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 191

Conread position: 51-641
Cow position: chr18:56330205-56329615 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 146

Conread position: 52-616
Cow position: chr18:42985577-42985013 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 164

Conread position: 53-616
Cow position: chr18:42960315-42959752 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 68

Conread position: 54-616
Cow position: chr18:53509224-53509785 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 54-616
Cow position: chr18:53525678-53526239 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 56-447
Cow position: chr18:43048741-43048350 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 237

Conread position: 56-641
Cow position: chr18:52446927-52447512 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 433

Conread position: 57-618
Cow position: chr18:33093118-33092557 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 18

Conread position: 57-682
Cow position: chr18:51752346-51751721 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 60-611
Cow position: chr18:53610224-53609674 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 323
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 516, 0

Conread position: 63-600
Cow position: chr18:14453294-14452756 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 128

Conread position: 63-640
Cow position: chr18:55067116-55066539 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 225

Conread position: 63-653
Cow position: chr18:51969335-51969914 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 0

Conread position: 69-617
Cow position: chr18:51838786-51838243 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 329
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 151, 131

Conread position: 73-613
Cow position: chr18:50281678-50282218 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 336
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 39

Conread position: 73-641
Cow position: chr18:43120403-43119835 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 125

Conread position: 73-641
Cow position: chr18:49033378-49032810 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 39

Conread position: 74-616
Cow position: chr18:49022233-49022773 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 324
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 70

Conread position: 75-632
Cow position: chr18:51969029-51969568 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 143

Conread position: 76-641
Cow position: chr18:40306175-40306741 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 381

Conread position: 76-653
Cow position: chr18:56247808-56247237 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 78-641
Cow position: chr18:40074866-40075427 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 351
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 61

Conread position: 78-641
Cow position: chr18:41197500-41198063 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 53

Conread position: 82-610
Cow position: chr18:50295201-50295730 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 325
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 305, 289

Conread position: 85-636
Cow position: chr18:53636112-53635561 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 338
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 28

Conread position: 85-636
Cow position: chr18:56128053-56128604 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 330
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 28

Conread position: 87-680
Cow position: chr18:51400298-51400892 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 532, 552

Conread position: 93-445
Cow position: chr18:53598284-53597938 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 217
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 29

Conread position: 93-610
Cow position: chr18:55523332-55523849 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 313
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 35

Conread position: 96-640
Cow position: chr18:53559701-53560245 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 107-625
Cow position: chr18:54966821-54967339 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 110-647
Cow position: chr18:44239714-44240251 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 113-595
Cow position: chr18:56248276-56247807 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 303
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 351, 52

Conread position: 114-636
Cow position: chr18:42837975-42837453 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 121

Conread position: 117-641
Cow position: chr18:44154490-44153964 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 179

Conread position: 118-655
Cow position: chr18:42985596-42985058 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 336

Conread position: 120-647
Cow position: chr18:43023104-43022577 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-636
Cow position: chr18:55008366-55008875 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 320
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 187, 149

Conread position: 128-635
Cow position: chr18:50059732-50059225 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 223, 227

Conread position: 140-641
Cow position: chr18:42744730-42744229 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 142-641
Cow position: chr18:43048739-43048242 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 57

Conread position: 145-667
Cow position: chr18:40074850-40075371 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 324
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 14

Conread position: 145-667
Cow position: chr18:55017788-55018312 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 95

Conread position: 146-589
Cow position: chr18:14453295-14452852 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 150

Conread position: 146-635
Cow position: chr18:55523301-55523790 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 304
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 306, 325

Conread position: 146-648
Cow position: chr18:50848079-50848578 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 328
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 65

Conread position: 150-640
Cow position: chr18:56493841-56494331 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 142

Conread position: 151-653
Cow position: chr18:42827402-42827904 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 143

Conread position: 157-607
Cow position: chr18:50281678-50282128 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 272
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 179-619
Cow position: chr18:50083308-50083748 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 123

Conread position: 179-625
Cow position: chr18:54992678-54993124 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 288
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 106, 122

Conread position: 180-640
Cow position: chr18:56315824-56316284 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 273
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 126

Conread position: 192-625
Cow position: chr18:52012486-52012055 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 270
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 269, 38

Conread position: 214-614
Cow position: chr18:50245718-50246118 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 251
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 166

Conread position: 224-641
Cow position: chr18:43048741-43048324 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 224-641
Cow position: chr18:52427536-52427953 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 264
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 224-641
Cow position: chr18:52432885-52433302 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 263
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 229-663
Cow position: chr18:14453296-14452862 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 47

Conread position: 230-676
Cow position: chr18:51970333-51970772 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 277
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 401, 62

Conread position: 236-613
Cow position: chr18:51766083-51765706 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 38

Conread position: 237-614
Cow position: chr18:56128036-56128414 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 242
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 40

Conread position: 237-645
Cow position: chr18:53636129-53635720 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 238-621
Cow position: chr18:53509239-53509622 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 58

Conread position: 238-621
Cow position: chr18:53525693-53526076 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 58

Conread position: 238-633
Cow position: chr18:51839476-51839081 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 53

Conread position: 238-641
Cow position: chr18:55067109-55066706 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 51

Conread position: 239-653
Cow position: chr18:40324882-40324468 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 254-653
Cow position: chr18:14454003-14453604 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 216

Conread position: 263-640
Cow position: chr18:56493783-56494163 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 37, 120

Conread position: 264-667
Cow position: chr18:53559701-53560106 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 261
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 38

Conread position: 290-506
Cow position: chr18:43053406-43053190 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 292-653
Cow position: chr18:51789838-51789477 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 82

Conread position: 292-653
Cow position: chr18:51812997-51812636 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 293-614
Cow position: chr18:14453317-14452995 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 300-653
Cow position: chr18:42790943-42791296 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 253

Conread position: 301-615
Cow position: chr18:1417814-1418128 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 135

Conread position: 301-652
Cow position: chr18:42827384-42827735 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 303-652
Cow position: chr18:43167774-43168123 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 304-641
Cow position: chr18:52427532-52427869 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 304-641
Cow position: chr18:52432881-52433218 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 307-660
Cow position: chr18:50848072-50848422 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 69, 65

Conread position: 312-630
Cow position: chr18:51839486-51839169 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 315, 0

Conread position: 314-615
Cow position: chr18:50250835-50251128 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 148, 55

Conread position: 314-656
Cow position: chr18:43167617-43167959 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 215
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 110

Conread position: 317-641
Cow position: chr18:33065110-33064786 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 38

Conread position: 321-653
Cow position: chr18:51400280-51400612 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 92

Conread position: 321-660
Cow position: chr18:43094159-43093823 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 225, 68

Conread position: 322-627
Cow position: chr18:49022229-49022534 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 148

Conread position: 326-589
Cow position: chr18:43053454-43053191 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 326-613
Cow position: chr18:49021572-49021859 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 184
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 92

Conread position: 327-659
Cow position: chr18:50848173-50848505 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 203
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 129

Conread position: 334-615
Cow position: chr18:50281687-50281968 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 111

Conread position: 334-615
Cow position: chr18:50295201-50295482 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 218, 198

Conread position: 338-633
Cow position: chr18:51813035-51812740 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 34

Conread position: 339-641
Cow position: chr18:51839543-51839241 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 347-635
Cow position: chr18:40251118-40251396 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 37

Conread position: 348-640
Cow position: chr18:49021678-49021970 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 179, 198

Conread position: 354-614
Cow position: chr18:50271409-50271670 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 195

Conread position: 354-618
Cow position: chr18:55075121-55075386 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 110

Conread position: 354-626
Cow position: chr18:51873733-51874005 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 120, 98

Conread position: 362-641
Cow position: chr18:54992693-54992972 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 93

Conread position: 372-641
Cow position: chr18:41949381-41949112 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 372-641
Cow position: chr18:42837969-42837700 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 380-613
Cow position: chr18:22634533-22634764 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 79

Conread position: 382-641
Cow position: chr18:53498030-53498289 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 71

Conread position: 383-653
Cow position: chr18:14453310-14453040 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 85, 68

Conread position: 386-653
Cow position: chr18:43023090-43022823 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 387-641
Cow position: chr18:56316115-56316369 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 83, 68

Conread position: 387-653
Cow position: chr18:43167774-43168040 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 85

Conread position: 389-635
Cow position: chr18:51400264-51400510 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 234, 229

Conread position: 393-660
Cow position: chr18:51873689-51873955 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 12

Conread position: 393-698
Cow position: chr18:51766093-51765782 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 16

Conread position: 394-653
Cow position: chr18:50083271-50083530 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 8

Conread position: 397-617
Cow position: chr18:53497964-53498181 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 406-631
Cow position: chr18:42724589-42724362 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 147

Conread position: 409-626
Cow position: chr18:51969027-51969244 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 45

Conread position: 417-641
Cow position: chr18:53571823-53572046 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 35

Conread position: 425-648
Cow position: chr18:43053439-43053216 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 29

Conread position: 491-653
Cow position: chr18:42744715-42744553 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.