Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-616
Cow position:
Alignm length: 617
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 235

Conread position: 1-640
Cow position:
Alignm length: 641
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 291

Conread position: 2-165
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 129

Conread position: 2-400
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 381

Conread position: 2-419
Cow position:
Alignm length: 421
Alignm identity: 263
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 112, 141

Conread position: 2-447
Cow position:
Alignm length: 447
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 285

Conread position: 2-468
Cow position:
Alignm length: 470
Alignm identity: 294
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 237, 49

Conread position: 2-484
Cow position:
Alignm length: 484
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 381

Conread position: 2-571
Cow position:
Alignm length: 574
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 291

Conread position: 2-574
Cow position:
Alignm length: 574
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 139

Conread position: 2-575
Cow position:
Alignm length: 576
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 78

Conread position: 2-579
Cow position:
Alignm length: 580
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 349

Conread position: 2-581
Cow position:
Alignm length: 582
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 515, 511

Conread position: 2-603
Cow position:
Alignm length: 603
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 126

Conread position: 2-605
Cow position:
Alignm length: 612
Alignm identity: 385
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 116

Conread position: 2-613
Cow position:
Alignm length: 613
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 113

Conread position: 2-613
Cow position:
Alignm length: 613
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 381

Conread position: 2-613
Cow position:
Alignm length: 615
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 124

Conread position: 2-615
Cow position:
Alignm length: 614
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-616
Cow position:
Alignm length: 618
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 311

Conread position: 2-617
Cow position:
Alignm length: 619
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 221

Conread position: 2-621
Cow position:
Alignm length: 621
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 458

Conread position: 2-625
Cow position:
Alignm length: 624
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 2-628
Cow position:
Alignm length: 630
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 288

Conread position: 2-633
Cow position:
Alignm length: 639
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 2-636
Cow position:
Alignm length: 635
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-640
Cow position:
Alignm length: 639
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position:
Alignm length: 642
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 211

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 2-641
Cow position:
Alignm length: 640
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-641
Cow position:
Alignm length: 643
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 448

Conread position: 2-652
Cow position:
Alignm length: 653
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 209

Conread position: 2-653
Cow position:
Alignm length: 656
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 291

Conread position: 2-653
Cow position:
Alignm length: 653
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 448

Conread position: 2-653
Cow position:
Alignm length: 654
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 198

Conread position: 2-653
Cow position:
Alignm length: 652
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-667
Cow position:
Alignm length: 672
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 122

Conread position: 2-684
Cow position:
Alignm length: 691
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 113

Conread position: 3-590
Cow position:
Alignm length: 590
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 206

Conread position: 3-609
Cow position:
Alignm length: 610
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 206

Conread position: 3-610
Cow position:
Alignm length: 610
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 415

Conread position: 3-616
Cow position:
Alignm length: 615
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 127

Conread position: 3-633
Cow position:
Alignm length: 631
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-635
Cow position:
Alignm length: 636
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 248

Conread position: 3-636
Cow position:
Alignm length: 635
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 468

Conread position: 3-641
Cow position:
Alignm length: 643
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 9

Conread position: 3-641
Cow position:
Alignm length: 641
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 86

Conread position: 3-648
Cow position:
Alignm length: 651
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 3-653
Cow position:
Alignm length: 654
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 36

Conread position: 8-620
Cow position:
Alignm length: 614
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 274

Conread position: 9-333
Cow position:
Alignm length: 326
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 259, 268

Conread position: 9-575
Cow position:
Alignm length: 569
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 516, 530

Conread position: 9-633
Cow position:
Alignm length: 626
Alignm identity: 380
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 272, 66

Conread position: 9-653
Cow position:
Alignm length: 648
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 115

Conread position: 10-659
Cow position:
Alignm length: 652
Alignm identity: 405
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 186, 70

Conread position: 12-616
Cow position:
Alignm length: 608
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 168

Conread position: 12-652
Cow position:
Alignm length: 648
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 48

Conread position: 12-653
Cow position:
Alignm length: 644
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 17-617
Cow position:
Alignm length: 603
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 23

Conread position: 17-641
Cow position:
Alignm length: 628
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 110

Conread position: 31-616
Cow position:
Alignm length: 591
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 56-616
Cow position:
Alignm length: 563
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 318

Conread position: 58-621
Cow position:
Alignm length: 570
Alignm identity: 348
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 6

Conread position: 69-626
Cow position:
Alignm length: 558
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 69-641
Cow position:
Alignm length: 573
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-615
Cow position:
Alignm length: 545
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 223

Conread position: 82-617
Cow position:
Alignm length: 538
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 45

Conread position: 82-618
Cow position:
Alignm length: 540
Alignm identity: 325
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 126, 64

Conread position: 99-616
Cow position:
Alignm length: 519
Alignm identity: 322
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 435, 19

Conread position: 153-616
Cow position:
Alignm length: 464
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 156-653
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 179-653
Cow position:
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 126

Conread position: 219-640
Cow position:
Alignm length: 425
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 17

Conread position: 221-616
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 73

Conread position: 225-640
Cow position:
Alignm length: 418
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 109

Conread position: 225-641
Cow position:
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 246

Conread position: 232-680
Cow position:
Alignm length: 452
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 7

Conread position: 302-616
Cow position:
Alignm length: 317
Alignm identity: 200
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 169, 13

Conread position: 312-648
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 0

Conread position: 327-633
Cow position:
Alignm length: 311
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 147

Conread position: 345-641
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 376-667
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 267, 14

Conread position: 387-641
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 35

Conread position: 392-653
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 56

Conread position: 398-641
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 20

Conread position: 405-641
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.