Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-631
Cow position:
Alignm length: 634
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 121

Conread position: 1-680
Cow position:
Alignm length: 684
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 312

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-195
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 37

Conread position: 2-244
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 2-272
Cow position:
Alignm length: 271
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-365
Cow position:
Alignm length: 366
Alignm identity: 227
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 264, 245

Conread position: 2-409
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 373

Conread position: 2-409
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 373

Conread position: 2-410
Cow position:
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 273

Conread position: 2-445
Cow position:
Alignm length: 449
Alignm identity: 277
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 127, 111

Conread position: 2-492
Cow position:
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 233

Conread position: 2-496
Cow position:
Alignm length: 497
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 454

Conread position: 2-531
Cow position:
Alignm length: 530
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-532
Cow position:
Alignm length: 536
Alignm identity: 319
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 118

Conread position: 2-572
Cow position:
Alignm length: 572
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 194

Conread position: 2-580
Cow position:
Alignm length: 582
Alignm identity: 353
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 127, 111

Conread position: 2-581
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 542, 551

Conread position: 2-581
Cow position:
Alignm length: 581
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 292

Conread position: 2-583
Cow position:
Alignm length: 583
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 111

Conread position: 2-613
Cow position:
Alignm length: 615
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 197

Conread position: 2-615
Cow position:
Alignm length: 617
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 289

Conread position: 2-615
Cow position:
Alignm length: 617
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 36

Conread position: 2-615
Cow position:
Alignm length: 617
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 111

Conread position: 2-615
Cow position:
Alignm length: 617
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 274

Conread position: 2-615
Cow position:
Alignm length: 617
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 125

Conread position: 2-616
Cow position:
Alignm length: 615
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-616
Cow position:
Alignm length: 618
Alignm identity: 361
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 57

Conread position: 2-618
Cow position:
Alignm length: 618
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 380

Conread position: 2-618
Cow position:
Alignm length: 620
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 292

Conread position: 2-621
Cow position:
Alignm length: 621
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 125

Conread position: 2-621
Cow position:
Alignm length: 622
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 292

Conread position: 2-621
Cow position:
Alignm length: 622
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 125

Conread position: 2-633
Cow position:
Alignm length: 634
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 374

Conread position: 2-634
Cow position:
Alignm length: 637
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 134

Conread position: 2-635
Cow position:
Alignm length: 637
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 128

Conread position: 2-640
Cow position:
Alignm length: 643
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 68

Conread position: 2-640
Cow position:
Alignm length: 642
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 124

Conread position: 2-641
Cow position:
Alignm length: 643
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 2-641
Cow position:
Alignm length: 641
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 2-645
Cow position:
Alignm length: 646
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 111

Conread position: 2-652
Cow position:
Alignm length: 652
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 209

Conread position: 2-652
Cow position:
Alignm length: 653
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 287

Conread position: 2-653
Cow position:
Alignm length: 652
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position:
Alignm length: 652
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-667
Cow position:
Alignm length: 674
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 209

Conread position: 2-681
Cow position:
Alignm length: 687
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 125

Conread position: 3-415
Cow position:
Alignm length: 416
Alignm identity: 254
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 34

Conread position: 3-429
Cow position:
Alignm length: 428
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 282, 290

Conread position: 3-580
Cow position:
Alignm length: 578
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-580
Cow position:
Alignm length: 579
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 289

Conread position: 3-613
Cow position:
Alignm length: 615
Alignm identity: 365
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 155, 117

Conread position: 3-614
Cow position:
Alignm length: 615
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 204

Conread position: 3-614
Cow position:
Alignm length: 616
Alignm identity: 373
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 370, 362

Conread position: 3-615
Cow position:
Alignm length: 622
Alignm identity: 384
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 20

Conread position: 3-617
Cow position:
Alignm length: 616
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 454

Conread position: 3-617
Cow position:
Alignm length: 616
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 452

Conread position: 3-619
Cow position:
Alignm length: 621
Alignm identity: 363
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 217, 204

Conread position: 3-635
Cow position:
Alignm length: 634
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 530

Conread position: 3-641
Cow position:
Alignm length: 645
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 3-641
Cow position:
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 534

Conread position: 3-652
Cow position:
Alignm length: 651
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 460

Conread position: 3-653
Cow position:
Alignm length: 654
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 121

Conread position: 3-654
Cow position:
Alignm length: 654
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 458

Conread position: 3-680
Cow position:
Alignm length: 681
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 371

Conread position: 3-680
Cow position:
Alignm length: 680
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 640, 671

Conread position: 4-578
Cow position:
Alignm length: 578
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 9-615
Cow position:
Alignm length: 611
Alignm identity: 347
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 227, 257

Conread position: 9-641
Cow position:
Alignm length: 635
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 218

Conread position: 9-641
Cow position:
Alignm length: 637
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 196

Conread position: 9-641
Cow position:
Alignm length: 637
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 228

Conread position: 9-641
Cow position:
Alignm length: 633
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-416
Cow position:
Alignm length: 407
Alignm identity: 246
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 390, 0

Conread position: 12-625
Cow position:
Alignm length: 631
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 12-640
Cow position:
Alignm length: 633
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 42

Conread position: 12-659
Cow position:
Alignm length: 655
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 186

Conread position: 14-613
Cow position:
Alignm length: 605
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 107

Conread position: 17-618
Cow position:
Alignm length: 604
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 33

Conread position: 27-641
Cow position:
Alignm length: 618
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 249

Conread position: 42-564
Cow position:
Alignm length: 528
Alignm identity: 330
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 178, 165

Conread position: 42-621
Cow position:
Alignm length: 585
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 168

Conread position: 42-622
Cow position:
Alignm length: 585
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 88

Conread position: 42-626
Cow position:
Alignm length: 587
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 250

Conread position: 50-616
Cow position:
Alignm length: 570
Alignm identity: 337
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 19

Conread position: 50-641
Cow position:
Alignm length: 592
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 50-641
Cow position:
Alignm length: 592
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-615
Cow position:
Alignm length: 565
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 240

Conread position: 73-613
Cow position:
Alignm length: 546
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 123

Conread position: 75-652
Cow position:
Alignm length: 578
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 82-621
Cow position:
Alignm length: 543
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 82-621
Cow position:
Alignm length: 544
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 84-619
Cow position:
Alignm length: 542
Alignm identity: 316
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 113

Conread position: 87-615
Cow position:
Alignm length: 532
Alignm identity: 327
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 35, 25

Conread position: 98-628
Cow position:
Alignm length: 536
Alignm identity: 329
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 105, 101

Conread position: 152-659
Cow position:
Alignm length: 510
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 0

Conread position: 158-615
Cow position:
Alignm length: 478
Alignm identity: 272
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 8

Conread position: 179-648
Cow position:
Alignm length: 474
Alignm identity: 293
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 114

Conread position: 214-652
Cow position:
Alignm length: 441
Alignm identity: 259
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 320, 338

Conread position: 224-641
Cow position:
Alignm length: 418
Alignm identity: 266
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 241-654
Cow position:
Alignm length: 420
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 266-675
Cow position:
Alignm length: 412
Alignm identity: 246
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 377, 121

Conread position: 301-635
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 224, 232

Conread position: 304-625
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 326-641
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 134

Conread position: 333-641
Cow position:
Alignm length: 310
Alignm identity: 194
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 79, 71

Conread position: 339-667
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 316, 66

Conread position: 385-626
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 388-640
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 160

Conread position: 402-653
Cow position:
Alignm length: 257
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 144, 126

Show alignments to all cow chromosomes.