Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 1-602
Cow position:
Alignm length: 605
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 441

Conread position: 1-616
Cow position:
Alignm length: 621
Alignm identity: 364
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 55

Conread position: 2-200
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-247
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 35

Conread position: 2-254
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-260
Cow position:
Alignm length: 259
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-388
Cow position:
Alignm length: 388
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 319, 0

Conread position: 2-409
Cow position:
Alignm length: 411
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 266, 288

Conread position: 2-500
Cow position:
Alignm length: 500
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 288

Conread position: 2-568
Cow position:
Alignm length: 567
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-595
Cow position:
Alignm length: 595
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 28

Conread position: 2-608
Cow position:
Alignm length: 607
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 0

Conread position: 2-623
Cow position:
Alignm length: 623
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 616, 0

Conread position: 2-636
Cow position:
Alignm length: 636
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 112

Conread position: 2-648
Cow position:
Alignm length: 649
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 161

Conread position: 2-652
Cow position:
Alignm length: 655
Alignm identity: 396
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 214, 110

Conread position: 2-652
Cow position:
Alignm length: 653
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 121

Conread position: 2-653
Cow position:
Alignm length: 654
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 288

Conread position: 2-653
Cow position:
Alignm length: 652
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-689
Cow position:
Alignm length: 695
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 105

Conread position: 3-479
Cow position:
Alignm length: 480
Alignm identity: 294
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 40

Conread position: 3-608
Cow position:
Alignm length: 607
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 83

Conread position: 3-614
Cow position:
Alignm length: 612
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-460
Cow position:
Alignm length: 462
Alignm identity: 286
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 194, 157

Conread position: 6-641
Cow position:
Alignm length: 637
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 284

Conread position: 9-452
Cow position:
Alignm length: 445
Alignm identity: 278
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 9, 29

Conread position: 9-613
Cow position:
Alignm length: 615
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 191

Conread position: 9-615
Cow position:
Alignm length: 608
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 564, 0

Conread position: 9-652
Cow position:
Alignm length: 649
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 104

Conread position: 9-667
Cow position:
Alignm length: 661
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 634, 194

Conread position: 12-484
Cow position:
Alignm length: 476
Alignm identity: 287
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 123, 111

Conread position: 12-535
Cow position:
Alignm length: 528
Alignm identity: 319
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 118

Conread position: 31-641
Cow position:
Alignm length: 613
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 6

Conread position: 32-614
Cow position:
Alignm length: 583
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 36-614
Cow position:
Alignm length: 581
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 72

Conread position: 36-652
Cow position:
Alignm length: 625
Alignm identity: 374
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 206, 163

Conread position: 49-658
Cow position:
Alignm length: 612
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 143

Conread position: 49-659
Cow position:
Alignm length: 614
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 42

Conread position: 50-626
Cow position:
Alignm length: 581
Alignm identity: 352
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 237, 63

Conread position: 50-652
Cow position:
Alignm length: 603
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 51-500
Cow position:
Alignm length: 457
Alignm identity: 293
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 233, 258

Conread position: 51-652
Cow position:
Alignm length: 609
Alignm identity: 354
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 27

Conread position: 66-641
Cow position:
Alignm length: 578
Alignm identity: 348
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 104

Conread position: 72-463
Cow position:
Alignm length: 394
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 199, 221

Conread position: 72-615
Cow position:
Alignm length: 548
Alignm identity: 306
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 207, 220

Conread position: 74-659
Cow position:
Alignm length: 587
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 458

Conread position: 79-615
Cow position:
Alignm length: 545
Alignm identity: 337
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 106, 134

Conread position: 126-633
Cow position:
Alignm length: 516
Alignm identity: 327
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 89, 42

Conread position: 156-535
Cow position:
Alignm length: 382
Alignm identity: 233
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 114, 137

Conread position: 157-609
Cow position:
Alignm length: 457
Alignm identity: 268
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 113, 131

Conread position: 165-640
Cow position:
Alignm length: 476
Alignm identity: 283
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 240-616
Cow position:
Alignm length: 380
Alignm identity: 232
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 61

Conread position: 302-617
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 64, 73

Conread position: 305-652
Cow position:
Alignm length: 349
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 252, 238

Conread position: 320-652
Cow position:
Alignm length: 335
Alignm identity: 207
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 99

Conread position: 325-653
Cow position:
Alignm length: 329
Alignm identity: 213
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 331-616
Cow position:
Alignm length: 289
Alignm identity: 183
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 192, 201

Conread position: 417-617
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 44

Conread position: 462-648
Cow position:
Alignm length: 187
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.