Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063H14.5 |
| Conread position: | 1-685 |
| Cow position: | chr3:68045698-68046382 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-827 |
| Cow position: | chr3:68027105-68027932 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 748 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 772, 734 |
| Conread position: | 2-272 |
| Cow position: | chr3:77350898-77350631 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 232, 201 |
| Conread position: | 2-580 |
| Cow position: | chr3:62742960-62743515 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 45 |
| Conread position: | 2-607 |
| Cow position: | chr3:62742875-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 2-628 |
| Cow position: | chr3:68027022-68027648 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 2-633 |
| Cow position: | chr3:62742376-62743003 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 508, 263 |
| Conread position: | 2-633 |
| Cow position: | chr3:68045615-68046246 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 534, 544 |
| Conread position: | 2-635 |
| Cow position: | chr3:62722311-62721678 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 120 |
| Conread position: | 2-659 |
| Cow position: | chr3:62722227-62721568 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 238 |
| Conread position: | 2-678 |
| Cow position: | chr3:62742709-62743362 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 37 |
| Conread position: | 3-616 |
| Cow position: | chr3:62742792-62743384 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 5-641 |
| Cow position: | chr3:77351222-77350598 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 6-660 |
| Cow position: | chr3:77351055-77350421 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 390 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 10-621 |
| Cow position: | chr3:77351302-77350699 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 10-641 |
| Cow position: | chr3:62722387-62721756 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 35-653 |
| Cow position: | chr3:62742241-62742854 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 53-616 |
| Cow position: | chr3:68026990-68027552 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 75-616 |
| Cow position: | chr3:68045604-68046145 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 94-652 |
| Cow position: | chr3:62722387-62721829 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 94-659 |
| Cow position: | chr3:77351302-77350745 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 345 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 142-616 |
| Cow position: | chr3:68026995-68027468 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 6 |
| Conread position: | 163-622 |
| Cow position: | chr3:68045608-68046067 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 296 |
| Conread position: | 211-613 |
| Cow position: | chr3:68026979-68027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 342 |
| Conread position: | 211-616 |
| Cow position: | chr3:68045572-68045977 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 325-659 |
| Cow position: | chr3:68027009-68027343 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-652 |
| Cow position: | chr3:68045603-68045845 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.