Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-613
Cow position:
Alignm length: 616
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 595, 586

Conread position: 1-618
Cow position:
Alignm length: 622
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 2-199
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 126

Conread position: 2-371
Cow position:
Alignm length: 370
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-404
Cow position:
Alignm length: 409
Alignm identity: 259
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 49

Conread position: 2-418
Cow position:
Alignm length: 419
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 0

Conread position: 2-451
Cow position:
Alignm length: 455
Alignm identity: 292
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 22

Conread position: 2-454
Cow position:
Alignm length: 454
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 381

Conread position: 2-570
Cow position:
Alignm length: 571
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 141

Conread position: 2-599
Cow position:
Alignm length: 600
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 414

Conread position: 2-607
Cow position:
Alignm length: 611
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 101

Conread position: 2-608
Cow position:
Alignm length: 611
Alignm identity: 354
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 475, 92

Conread position: 2-613
Cow position:
Alignm length: 619
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 125

Conread position: 2-614
Cow position:
Alignm length: 613
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-614
Cow position:
Alignm length: 614
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 450

Conread position: 2-615
Cow position:
Alignm length: 622
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 115

Conread position: 2-615
Cow position:
Alignm length: 615
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 458

Conread position: 2-616
Cow position:
Alignm length: 622
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 111

Conread position: 2-616
Cow position:
Alignm length: 624
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 2-617
Cow position:
Alignm length: 622
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 120

Conread position: 2-618
Cow position:
Alignm length: 628
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 200

Conread position: 2-618
Cow position:
Alignm length: 619
Alignm identity: 374
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 303, 111

Conread position: 2-619
Cow position:
Alignm length: 623
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 125

Conread position: 2-620
Cow position:
Alignm length: 627
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 98

Conread position: 2-620
Cow position:
Alignm length: 621
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 2-620
Cow position:
Alignm length: 631
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 2-632
Cow position:
Alignm length: 638
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 115

Conread position: 2-633
Cow position:
Alignm length: 633
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 370

Conread position: 2-636
Cow position:
Alignm length: 638
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 2-641
Cow position:
Alignm length: 644
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 110

Conread position: 2-648
Cow position:
Alignm length: 647
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position:
Alignm length: 653
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 360

Conread position: 2-653
Cow position:
Alignm length: 653
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 363

Conread position: 2-653
Cow position:
Alignm length: 653
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 530

Conread position: 2-659
Cow position:
Alignm length: 661
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 292

Conread position: 2-665
Cow position:
Alignm length: 666
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 641, 0

Conread position: 3-296
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-581
Cow position:
Alignm length: 579
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 0

Conread position: 3-617
Cow position:
Alignm length: 620
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 34

Conread position: 3-620
Cow position:
Alignm length: 622
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 116

Conread position: 3-620
Cow position:
Alignm length: 625
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 123

Conread position: 3-620
Cow position:
Alignm length: 625
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 117

Conread position: 3-632
Cow position:
Alignm length: 631
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 291

Conread position: 3-633
Cow position:
Alignm length: 637
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 138

Conread position: 3-641
Cow position:
Alignm length: 640
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 292

Conread position: 3-641
Cow position:
Alignm length: 640
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 479

Conread position: 3-667
Cow position:
Alignm length: 669
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 63

Conread position: 3-680
Cow position:
Alignm length: 680
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 647, 668

Conread position: 5-613
Cow position:
Alignm length: 617
Alignm identity: 368
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 23

Conread position: 5-640
Cow position:
Alignm length: 636
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-652
Cow position:
Alignm length: 648
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 105

Conread position: 9-641
Cow position:
Alignm length: 635
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 76

Conread position: 10-652
Cow position:
Alignm length: 644
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 199

Conread position: 11-653
Cow position:
Alignm length: 644
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 11-667
Cow position:
Alignm length: 661
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 17-451
Cow position:
Alignm length: 439
Alignm identity: 268
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 171

Conread position: 23-547
Cow position:
Alignm length: 528
Alignm identity: 318
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 252, 268

Conread position: 34-633
Cow position:
Alignm length: 601
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 13

Conread position: 42-641
Cow position:
Alignm length: 605
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 86

Conread position: 48-652
Cow position:
Alignm length: 612
Alignm identity: 385
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 21

Conread position: 49-608
Cow position:
Alignm length: 568
Alignm identity: 354
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 243, 140

Conread position: 50-575
Cow position:
Alignm length: 533
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 94

Conread position: 53-641
Cow position:
Alignm length: 590
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 68

Conread position: 56-691
Cow position:
Alignm length: 642
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 393

Conread position: 66-617
Cow position:
Alignm length: 557
Alignm identity: 344
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 155, 134

Conread position: 72-653
Cow position:
Alignm length: 586
Alignm identity: 338
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 40

Conread position: 74-620
Cow position:
Alignm length: 552
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 47

Conread position: 77-618
Cow position:
Alignm length: 544
Alignm identity: 334
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 103

Conread position: 120-653
Cow position:
Alignm length: 535
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 174

Conread position: 130-653
Cow position:
Alignm length: 527
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 21

Conread position: 219-620
Cow position:
Alignm length: 407
Alignm identity: 257
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 85

Conread position: 242-614
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 222, 116

Conread position: 302-613
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 53

Conread position: 303-571
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 74

Conread position: 326-653
Cow position:
Alignm length: 329
Alignm identity: 213
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 218, 207

Conread position: 327-653
Cow position:
Alignm length: 334
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 45

Conread position: 329-667
Cow position:
Alignm length: 342
Alignm identity: 210
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 44

Conread position: 341-653
Cow position:
Alignm length: 315
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 113

Conread position: 351-653
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 386-614
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 404-622
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 44

Show alignments to all cow chromosomes.