Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-578
Cow position:
Alignm length: 579
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 194

Conread position: 2-401
Cow position:
Alignm length: 400
Alignm identity: 247
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 195, 0

Conread position: 2-603
Cow position:
Alignm length: 607
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 110

Conread position: 2-613
Cow position:
Alignm length: 616
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 307

Conread position: 2-614
Cow position:
Alignm length: 613
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-615
Cow position:
Alignm length: 615
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 461

Conread position: 2-615
Cow position:
Alignm length: 614
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-616
Cow position:
Alignm length: 616
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 542, 550

Conread position: 2-617
Cow position:
Alignm length: 617
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 36

Conread position: 2-619
Cow position:
Alignm length: 618
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-625
Cow position:
Alignm length: 626
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 454

Conread position: 2-626
Cow position:
Alignm length: 630
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 2-626
Cow position:
Alignm length: 627
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 293

Conread position: 2-635
Cow position:
Alignm length: 634
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-635
Cow position:
Alignm length: 635
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 82

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 274

Conread position: 2-641
Cow position:
Alignm length: 641
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 446

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 199

Conread position: 2-641
Cow position:
Alignm length: 645
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 289

Conread position: 2-641
Cow position:
Alignm length: 642
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 289

Conread position: 2-641
Cow position:
Alignm length: 644
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 44

Conread position: 2-652
Cow position:
Alignm length: 651
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position:
Alignm length: 652
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-581
Cow position:
Alignm length: 582
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 232

Conread position: 3-599
Cow position:
Alignm length: 599
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 196

Conread position: 3-617
Cow position:
Alignm length: 618
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 118

Conread position: 3-631
Cow position:
Alignm length: 633
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 124

Conread position: 3-636
Cow position:
Alignm length: 636
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 299

Conread position: 3-640
Cow position:
Alignm length: 645
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 3-652
Cow position:
Alignm length: 651
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 3-653
Cow position:
Alignm length: 652
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 446

Conread position: 3-667
Cow position:
Alignm length: 671
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 124

Conread position: 8-173
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 9-615
Cow position:
Alignm length: 610
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 188

Conread position: 9-631
Cow position:
Alignm length: 624
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 9-653
Cow position:
Alignm length: 648
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 206

Conread position: 10-614
Cow position:
Alignm length: 605
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-519
Cow position:
Alignm length: 503
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 17

Conread position: 55-640
Cow position:
Alignm length: 591
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 47

Conread position: 63-653
Cow position:
Alignm length: 597
Alignm identity: 364
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 72, 68

Conread position: 72-641
Cow position:
Alignm length: 572
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 97

Conread position: 74-613
Cow position:
Alignm length: 541
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 216

Conread position: 93-569
Cow position:
Alignm length: 480
Alignm identity: 288
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 187, 199

Conread position: 93-616
Cow position:
Alignm length: 528
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 109

Conread position: 224-652
Cow position:
Alignm length: 432
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 249-607
Cow position:
Alignm length: 363
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 48

Conread position: 347-613
Cow position:
Alignm length: 267
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 380-648
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 387-652
Cow position:
Alignm length: 268
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 83

Conread position: 391-641
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 47

Conread position: 429-641
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.