Cow genome map

Conread name: Ss1.1-Pig4-TMW8063H14.5

Conread position: 2-507
Cow position: chrX:29045162-29044657 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 292

Conread position: 2-547
Cow position: chrX:13826766-13826221 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 323
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 467, 454

Conread position: 2-601
Cow position: chrX:25309988-25310586 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 209

Conread position: 2-613
Cow position: chrX:12627453-12628062 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 378
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 209, 48

Conread position: 2-615
Cow position: chrX:25325237-25324624 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-615
Cow position: chrX:25325321-25324708 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 372

Conread position: 2-615
Cow position: chrX:25325741-25325128 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 305

Conread position: 2-626
Cow position: chrX:25325069-25324445 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 294

Conread position: 2-626
Cow position: chrX:25325153-25324529 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 460

Conread position: 2-626
Cow position: chrX:29045729-29045126 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 274

Conread position: 2-627
Cow position: chrX:25324817-25324196 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 122

Conread position: 2-632
Cow position: chrX:25309736-25310366 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 549, 531

Conread position: 2-640
Cow position: chrX:25309904-25310542 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 286

Conread position: 2-641
Cow position: chrX:25325405-25324766 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position: chrX:25324901-25324250 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 2-653
Cow position: chrX:25325489-25324838 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 195

Conread position: 2-653
Cow position: chrX:25325573-25324922 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 183

Conread position: 2-709
Cow position: chrX:25309820-25310532 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 100

Conread position: 3-594
Cow position: chrX:29045245-29044654 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-648
Cow position: chrX:29045329-29044684 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 197

Conread position: 5-616
Cow position: chrX:29045810-29045220 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 382
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 280, 289

Conread position: 9-615
Cow position: chrX:25324978-25324372 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-622
Cow position: chrX:25309668-25310273 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 191

Conread position: 24-615
Cow position: chrX:25325888-25325296 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 50

Conread position: 49-667
Cow position: chrX:12627332-12627950 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 371
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 164

Conread position: 50-653
Cow position: chrX:25325609-25325006 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 315

Conread position: 52-653
Cow position: chrX:29045361-29044763 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 29

Conread position: 67-447
Cow position: chrX:29045832-29045452 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 244
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 58, 46

Conread position: 179-641
Cow position: chrX:25309661-25310123 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 76

Conread position: 225-603
Cow position: chrX:29045758-29045380 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 247
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 321, 317

Conread position: 300-680
Cow position: chrX:25325779-25325398 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 358, 371

Conread position: 312-659
Cow position: chrX:29045755-29045408 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 143

Conread position: 314-613
Cow position: chrX:29045837-29045538 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 70

Conread position: 339-652
Cow position: chrX:25309655-25309966 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 195, 11

Conread position: 382-653
Cow position: chrX:29045853-29045582 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.