Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063I03.5
        

               Conread position:
               1325-1521
               

               Cow position:
               chr21:12320108-12319911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               1336-1535
               

               Cow position:
               chr21:36170121-36170324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1336-1538
               

               Cow position:
               chr21:45946926-45946724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               1336-1539
               

               Cow position:
               chr21:14472058-14471853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               1336-1540
               

               Cow position:
               chr21:45188142-45187940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               1337-1506
               

               Cow position:
               chr21:35991592-35991762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               1337-1538
               

               Cow position:
               chr21:23885665-23885865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               1349-1541
               

               Cow position:
               chr21:24306302-24306101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1403-1540
               

               Cow position:
               chr21:47896302-47896165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 31
               
Show alignments to all cow chromosomes.