Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063I03.5
        

               Conread position:
               1325-1538
               

               Cow position:
               chr23:16509413-16509200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               1329-1534
               

               Cow position:
               chr23:30788699-30788489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1330-1539
               

               Cow position:
               chr23:34498974-34498764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               7, 108
               

               Conread position:
               1336-1506
               

               Cow position:
               chr23:7877928-7877755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1336-1512
               

               Cow position:
               chr23:27008495-27008316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 67
               

               Conread position:
               1336-1538
               

               Cow position:
               chr23:26292394-26292193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               1338-1512
               

               Cow position:
               chr23:411555-411726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               1338-1521
               

               Cow position:
               chr23:40686344-40686160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               1342-1539
               

               Cow position:
               chr23:30629574-30629373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 174
               

               Conread position:
               1345-1539
               

               Cow position:
               chr23:28437961-28438160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.