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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063I05.3
        

               
Conread position:
               
346-612
               

               
Cow position:
               
chr10:50050126-50049880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
346-681
               

               
Cow position:
               
chr10:55382550-55382217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
351-615
               

               
Cow position:
               
chr10:35486209-35486472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
352-820
               

               
Cow position:
               
chr10:10048904-10048450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
355-820
               

               
Cow position:
               
chr10:34607788-34607326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
357-788
               

               
Cow position:
               
chr10:51943015-51942588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
357-805
               

               
Cow position:
               
chr10:35904620-35905044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
359-725
               

               
Cow position:
               
chr10:58451158-58451512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
360-638
               

               
Cow position:
               
chr10:58414355-58414634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
360-813
               

               
Cow position:
               
chr10:49846988-49846552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 14
               

               
Conread position:
               
360-814
               

               
Cow position:
               
chr10:15868474-15868010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
360-814
               

               
Cow position:
               
chr10:38370232-38370687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
360-820
               

               
Cow position:
               
chr10:46830082-46829643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
334, 22
               

               
Conread position:
               
360-820
               

               
Cow position:
               
chr10:56835507-56835047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
361-694
               

               
Cow position:
               
chr10:42231029-42230680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
361-814
               

               
Cow position:
               
chr10:26040-25604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
362-775
               

               
Cow position:
               
chr10:4184419-4184002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
363-622
               

               
Cow position:
               
chr10:35248922-35249174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
364-636
               

               
Cow position:
               
chr10:43272828-43273098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
364-685
               

               
Cow position:
               
chr10:60491050-60491360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
364-828
               

               
Cow position:
               
chr10:29361143-29360670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
365-818
               

               
Cow position:
               
chr10:7817333-7816879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
366-576
               

               
Cow position:
               
chr10:53698629-53698413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
366-800
               

               
Cow position:
               
chr10:25150102-25149688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
366-812
               

               
Cow position:
               
chr10:27716629-27717064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
366-820
               

               
Cow position:
               
chr10:22616430-22616875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 31
               

               
Conread position:
               
368-619
               

               
Cow position:
               
chr10:52125483-52125721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
368-820
               

               
Cow position:
               
chr10:2462266-2462710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
368-821
               

               
Cow position:
               
chr10:10751779-10752213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
369-718
               

               
Cow position:
               
chr10:7383410-7383743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
370-814
               

               
Cow position:
               
chr10:35820412-35820841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
371-539
               

               
Cow position:
               
chr10:36945593-36945759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
371-558
               

               
Cow position:
               
chr10:25463035-25462850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
371-723
               

               
Cow position:
               
chr10:41132471-41132134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
372-811
               

               
Cow position:
               
chr10:11009621-11009202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
372-838
               

               
Cow position:
               
chr10:2973881-2974336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
373-561
               

               
Cow position:
               
chr10:35017940-35017754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
373-629
               

               
Cow position:
               
chr10:49923159-49923420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
373-715
               

               
Cow position:
               
chr10:52881413-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
373-820
               

               
Cow position:
               
chr10:48259042-48259463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
374-570
               

               
Cow position:
               
chr10:4485194-4485004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
374-602
               

               
Cow position:
               
chr10:37822395-37822629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
374-741
               

               
Cow position:
               
chr10:6384729-6384382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
374-814
               

               
Cow position:
               
chr10:41737502-41737081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
374-819
               

               
Cow position:
               
chr10:64182646-64182220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 17
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr10:42313109-42312676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr10:52296703-52296265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr10:61588051-61588493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
374-828
               

               
Cow position:
               
chr10:33163933-33163471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
375-689
               

               
Cow position:
               
chr10:46934574-46934889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
375-700
               

               
Cow position:
               
chr10:19539623-19539934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
375-761
               

               
Cow position:
               
chr10:39228365-39227970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
375-811
               

               
Cow position:
               
chr10:61511384-61510970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
343, 47
               

               
Conread position:
               
376-602
               

               
Cow position:
               
chr10:48814227-48814447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
376-814
               

               
Cow position:
               
chr10:37512037-37512473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
377-593
               

               
Cow position:
               
chr10:2328394-2328178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
379-583
               

               
Cow position:
               
chr10:15601978-15602182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
380-590
               

               
Cow position:
               
chr10:28843555-28843350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
380-788
               

               
Cow position:
               
chr10:40738189-40737800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
381-622
               

               
Cow position:
               
chr10:47159404-47159175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
381-679
               

               
Cow position:
               
chr10:63484832-63484547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
381-716
               

               
Cow position:
               
chr10:60446927-60446601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
381-768
               

               
Cow position:
               
chr10:24756613-24756234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
381-792
               

               
Cow position:
               
chr10:8161700-8161301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
381-806
               

               
Cow position:
               
chr10:44730278-44730698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
381-814
               

               
Cow position:
               
chr10:28841148-28840728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
381-814
               

               
Cow position:
               
chr10:37818358-37818785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
381-814
               

               
Cow position:
               
chr10:62220036-62219599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
381-816
               

               
Cow position:
               
chr10:22341768-22341338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
381-820
               

               
Cow position:
               
chr10:6720095-6719670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
381-820
               

               
Cow position:
               
chr10:19103986-19104408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
381-820
               

               
Cow position:
               
chr10:41408465-41408055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
382-571
               

               
Cow position:
               
chr10:17518648-17518836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
382-612
               

               
Cow position:
               
chr10:48377199-48377427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
382-641
               

               
Cow position:
               
chr10:30888673-30888932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
382-710
               

               
Cow position:
               
chr10:55577524-55577193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
382-768
               

               
Cow position:
               
chr10:11463466-11463849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
382-813
               

               
Cow position:
               
chr10:37014829-37014412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
382-820
               

               
Cow position:
               
chr10:24560789-24561219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
382-820
               

               
Cow position:
               
chr10:66128046-66127626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
383-821
               

               
Cow position:
               
chr10:57059079-57059517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 215
               

               
Conread position:
               
385-602
               

               
Cow position:
               
chr10:38195782-38195992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
385-800
               

               
Cow position:
               
chr10:37534782-37534400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
385-802
               

               
Cow position:
               
chr10:15889672-15889273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
385-802
               

               
Cow position:
               
chr10:16644993-16645407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr10:11081165-11080726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
386-617
               

               
Cow position:
               
chr10:22980786-22981013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
386-641
               

               
Cow position:
               
chr10:35605232-35604991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
386-705
               

               
Cow position:
               
chr10:37425946-37426259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
386-814
               

               
Cow position:
               
chr10:20371943-20372356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
386-814
               

               
Cow position:
               
chr10:50609750-50609313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
386-814
               

               
Cow position:
               
chr10:56733220-56732821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr10:13311936-13311500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr10:37235357-37235785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr10:44771838-44771424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
387-570
               

               
Cow position:
               
chr10:13350016-13350196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
387-638
               

               
Cow position:
               
chr10:8853739-8853496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
387-754
               

               
Cow position:
               
chr10:51803855-51804198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
387-802
               

               
Cow position:
               
chr10:7291624-7292009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
309, 31
               

               
Conread position:
               
387-812
               

               
Cow position:
               
chr10:40107294-40106893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr10:13368545-13368119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr10:19394378-19394811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr10:36490209-36489787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
388-567
               

               
Cow position:
               
chr10:38800030-38799853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
388-601
               

               
Cow position:
               
chr10:6719167-6718955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
388-621
               

               
Cow position:
               
chr10:31718191-31718422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
388-634
               

               
Cow position:
               
chr10:10027764-10027523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
388-724
               

               
Cow position:
               
chr10:55064083-55063754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
388-813
               

               
Cow position:
               
chr10:35792117-35791709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
388-814
               

               
Cow position:
               
chr10:55051071-55050645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
389-657
               

               
Cow position:
               
chr10:34674203-34673943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
389-815
               

               
Cow position:
               
chr10:10148839-10148424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
390-765
               

               
Cow position:
               
chr10:16986524-16986151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
390-788
               

               
Cow position:
               
chr10:10120375-10119996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 28
               

               
Conread position:
               
390-820
               

               
Cow position:
               
chr10:25342772-25342360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
390-820
               

               
Cow position:
               
chr10:42637424-42636992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
390-824
               

               
Cow position:
               
chr10:17073179-17073592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
391-567
               

               
Cow position:
               
chr10:40933950-40933773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
391-596
               

               
Cow position:
               
chr10:34705465-34705263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
391-596
               

               
Cow position:
               
chr10:36855940-36856145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
391-617
               

               
Cow position:
               
chr10:37174266-37174487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
391-620
               

               
Cow position:
               
chr10:35637955-35638177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
391-622
               

               
Cow position:
               
chr10:16830197-16830426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
391-629
               

               
Cow position:
               
chr10:35090239-35090002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
391-636
               

               
Cow position:
               
chr10:10153192-10152956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
391-717
               

               
Cow position:
               
chr10:25913594-25913927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
391-721
               

               
Cow position:
               
chr10:36531538-36531868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
391-804
               

               
Cow position:
               
chr10:30353036-30352629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
391-804
               

               
Cow position:
               
chr10:45871704-45871298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
391-806
               

               
Cow position:
               
chr10:37765227-37764799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
391-812
               

               
Cow position:
               
chr10:17844952-17844536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
391-813
               

               
Cow position:
               
chr10:28176215-28176617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr10:40147448-40147860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
391-816
               

               
Cow position:
               
chr10:69934596-69935004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr10:15817611-15818028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 21
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr10:23912325-23912728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr10:65071508-65071079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
391-828
               

               
Cow position:
               
chr10:31528154-31527756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
391-829
               

               
Cow position:
               
chr10:39398332-39398757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
392-602
               

               
Cow position:
               
chr10:47559375-47559570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
392-716
               

               
Cow position:
               
chr10:12652012-12651706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
392-725
               

               
Cow position:
               
chr10:33779337-33779005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
393-771
               

               
Cow position:
               
chr10:49146693-49146338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
394-820
               

               
Cow position:
               
chr10:20553363-20552949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
399-703
               

               
Cow position:
               
chr10:33881600-33881901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
399-813
               

               
Cow position:
               
chr10:48316764-48317180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
399-813
               

               
Cow position:
               
chr10:64285620-64286020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
400-612
               

               
Cow position:
               
chr10:39258311-39258524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
400-665
               

               
Cow position:
               
chr10:53429059-53428795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
400-719
               

               
Cow position:
               
chr10:3364008-3364311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
400-752
               

               
Cow position:
               
chr10:41626770-41626425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
400-780
               

               
Cow position:
               
chr10:20391256-20391640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
400-820
               

               
Cow position:
               
chr10:1976141-1976552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 12
               

               
Conread position:
               
402-820
               

               
Cow position:
               
chr10:35731352-35731758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
403-574
               

               
Cow position:
               
chr10:19403088-19402917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
403-596
               

               
Cow position:
               
chr10:9797735-9797920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 37
               

               
Conread position:
               
403-596
               

               
Cow position:
               
chr10:21528969-21528774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
403-603
               

               
Cow position:
               
chr10:35795524-35795321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
403-605
               

               
Cow position:
               
chr10:28223391-28223191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
403-607
               

               
Cow position:
               
chr10:52062005-52061796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
403-629
               

               
Cow position:
               
chr10:23127806-23128033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
403-636
               

               
Cow position:
               
chr10:53706800-53706569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
403-639
               

               
Cow position:
               
chr10:24830896-24831141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-642
               

               
Cow position:
               
chr10:14093074-14093302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
403-667
               

               
Cow position:
               
chr10:5465628-5465889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
403-700
               

               
Cow position:
               
chr10:61509772-61510056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-713
               

               
Cow position:
               
chr10:49942647-49942344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
403-716
               

               
Cow position:
               
chr10:46327865-46327557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
403-721
               

               
Cow position:
               
chr10:45294965-45295276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr10:66004052-66003724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
403-754
               

               
Cow position:
               
chr10:6531991-6532318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
403-754
               

               
Cow position:
               
chr10:38241255-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
403-762
               

               
Cow position:
               
chr10:9656350-9656714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-768
               

               
Cow position:
               
chr10:47690573-47690211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr10:24312717-24313114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr10:37989467-37989084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
239, 83
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr10:50332769-50332364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:22390773-22390357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:28721953-28721558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:29166455-29166046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 169
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:31400723-31401130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:40163759-40164161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:43487890-43487479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 83
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:51289419-51289022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:63276564-63276159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr10:63940946-63940543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
403-821
               

               
Cow position:
               
chr10:58557341-58556960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
354, 40
               

               
Conread position:
               
403-838
               

               
Cow position:
               
chr10:6490053-6489618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
404-638
               

               
Cow position:
               
chr10:30261431-30261658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
404-663
               

               
Cow position:
               
chr10:58043953-58044209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
404-730
               

               
Cow position:
               
chr10:31004841-31005165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
405-805
               

               
Cow position:
               
chr10:17837126-17836733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
406-591
               

               
Cow position:
               
chr10:7309277-7309461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
406-625
               

               
Cow position:
               
chr10:62454193-62454412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
406-648
               

               
Cow position:
               
chr10:54776718-54776481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
406-820
               

               
Cow position:
               
chr10:56079989-56080406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
409-814
               

               
Cow position:
               
chr10:6505516-6505136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
340, 17
               

               
Conread position:
               
410-820
               

               
Cow position:
               
chr10:52278890-52278495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
413-820
               

               
Cow position:
               
chr10:26577722-26577318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 242
               

               
Conread position:
               
414-629
               

               
Cow position:
               
chr10:21564915-21564702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
414-635
               

               
Cow position:
               
chr10:20133707-20133927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
415-792
               

               
Cow position:
               
chr10:24276565-24276938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
416-692
               

               
Cow position:
               
chr10:55395815-55396085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
416-820
               

               
Cow position:
               
chr10:16093374-16092983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
418-694
               

               
Cow position:
               
chr10:22888656-22888925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
418-725
               

               
Cow position:
               
chr10:6664192-6663886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
212, 61
               

               
Conread position:
               
418-749
               

               
Cow position:
               
chr10:2201973-2202286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
418-814
               

               
Cow position:
               
chr10:42746072-42745688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
419-820
               

               
Cow position:
               
chr10:58718814-58718421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
420-724
               

               
Cow position:
               
chr10:61982547-61982247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
421-814
               

               
Cow position:
               
chr10:29627807-29628175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
422-714
               

               
Cow position:
               
chr10:48407291-48407006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
220, 25
               

               
Conread position:
               
422-813
               

               
Cow position:
               
chr10:12392448-12392827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
422-820
               

               
Cow position:
               
chr10:18042340-18041953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 127
               

               
Conread position:
               
427-691
               

               
Cow position:
               
chr10:46262334-46262081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
254, 51
               

               
Conread position:
               
428-583
               

               
Cow position:
               
chr10:9959367-9959215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-586
               

               
Cow position:
               
chr10:15383479-15383323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-598
               

               
Cow position:
               
chr10:19679254-19679082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
428-600
               

               
Cow position:
               
chr10:46043143-46042976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
428-602
               

               
Cow position:
               
chr10:3708285-3708104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
428-603
               

               
Cow position:
               
chr10:58149021-58149190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-619
               

               
Cow position:
               
chr10:17389004-17388803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
428-636
               

               
Cow position:
               
chr10:704838-705049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
428-636
               

               
Cow position:
               
chr10:23071593-23071798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
428-636
               

               
Cow position:
               
chr10:30929736-30929943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
428-640
               

               
Cow position:
               
chr10:35981741-35981531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
203, 58
               

               
Conread position:
               
428-644
               

               
Cow position:
               
chr10:48619865-48620074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
194, 41
               

               
Conread position:
               
428-665
               

               
Cow position:
               
chr10:55319642-55319409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
206, 41
               

               
Conread position:
               
428-672
               

               
Cow position:
               
chr10:47182417-47182653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-679
               

               
Cow position:
               
chr10:10138009-10137773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
428-696
               

               
Cow position:
               
chr10:6569502-6569767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
428-716
               

               
Cow position:
               
chr10:39124284-39123998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
428-754
               

               
Cow position:
               
chr10:26829657-26829984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
428-762
               

               
Cow position:
               
chr10:45965644-45965324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
326, 41
               

               
Conread position:
               
428-765
               

               
Cow position:
               
chr10:44764342-44764681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 77
               

               
Conread position:
               
428-766
               

               
Cow position:
               
chr10:25699810-25699472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 216
               

               
Conread position:
               
428-767
               

               
Cow position:
               
chr10:60236951-60237273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
428-768
               

               
Cow position:
               
chr10:45658288-45657962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
428-771
               

               
Cow position:
               
chr10:52695578-52695914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
325, 58
               

               
Conread position:
               
428-789
               

               
Cow position:
               
chr10:29102193-29102535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
428-801
               

               
Cow position:
               
chr10:11576921-11576556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
364, 58
               

               
Conread position:
               
428-809
               

               
Cow position:
               
chr10:69564755-69564382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
428-810
               

               
Cow position:
               
chr10:38133331-38133704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
333, 58
               

               
Conread position:
               
428-811
               

               
Cow position:
               
chr10:40420706-40421067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 40
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr10:52569744-52569369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr10:54731173-54730788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
428-813
               

               
Cow position:
               
chr10:33914919-33915275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:5889610-5889995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:10985363-10985720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
325, 44
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:13765015-13765389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
326, 62
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:23576689-23576318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:24096220-24096604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 58
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:25936388-25936019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:27749838-27749450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 221
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:33195194-33194796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 50
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:38421490-38421874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:57142055-57142436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 247
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:62286714-62286326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 306
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr10:64876672-64876292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
428-816
               

               
Cow position:
               
chr10:37287024-37287404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
428-819
               

               
Cow position:
               
chr10:43531416-43531025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:1423981-1423599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:2449501-2449121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:9575900-9576271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
388, 41
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:10720523-10720908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 21
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:14817012-14817397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:16598840-16598457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:24871320-24870933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:29188203-29188593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
203, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:38942584-38942194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:41397624-41397248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:49168879-49169289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:50182905-50183279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 50
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:51306485-51306094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
237, 35
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:54848926-54848546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 41
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:59009990-59010373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:60961095-60960708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 217
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr10:64042233-64041850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
428-821
               

               
Cow position:
               
chr10:45371206-45370822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
326, 50
               

               
Conread position:
               
428-826
               

               
Cow position:
               
chr10:45378852-45379246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 58
               

               
Conread position:
               
428-832
               

               
Cow position:
               
chr10:11624080-11623680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 205
               

               
Conread position:
               
428-834
               

               
Cow position:
               
chr10:66194153-66194547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 26
               

               
Conread position:
               
429-593
               

               
Cow position:
               
chr10:7786921-7786759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
429-634
               

               
Cow position:
               
chr10:36399900-36400108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
165, 49
               

               
Conread position:
               
429-634
               

               
Cow position:
               
chr10:36400935-36401143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
429-638
               

               
Cow position:
               
chr10:38995383-38995173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
429-666
               

               
Cow position:
               
chr10:17567956-17568183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 40
               

               
Conread position:
               
429-666
               

               
Cow position:
               
chr10:51727278-51727499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
429-781
               

               
Cow position:
               
chr10:19372187-19372529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
429-812
               

               
Cow position:
               
chr10:45476071-45476441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
324, 61
               

               
Conread position:
               
429-813
               

               
Cow position:
               
chr10:6436205-6435835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 41
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr10:50109750-50110129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
262, 221
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr10:5151500-5151119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr10:34654963-34655343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr10:56828172-56828553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 48
               

               
Conread position:
               
431-820
               

               
Cow position:
               
chr10:10469113-10468746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 39
               

               
Conread position:
               
432-577
               

               
Cow position:
               
chr10:8281412-8281269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-705
               

               
Cow position:
               
chr10:38355957-38356225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
109, 116
               

               
Conread position:
               
432-720
               

               
Cow position:
               
chr10:46850012-46849733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
240, 54
               

               
Conread position:
               
432-739
               

               
Cow position:
               
chr10:42123444-42123746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
432-763
               

               
Cow position:
               
chr10:37295526-37295840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
432-777
               

               
Cow position:
               
chr10:4148636-4148288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
206, 55
               

               
Conread position:
               
432-777
               

               
Cow position:
               
chr10:48512933-48513275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
322, 54
               

               
Conread position:
               
432-780
               

               
Cow position:
               
chr10:57461498-57461165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
432-780
               

               
Cow position:
               
chr10:68927292-68926963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
432-805
               

               
Cow position:
               
chr10:22509032-22509400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
238, 79
               

               
Conread position:
               
432-813
               

               
Cow position:
               
chr10:30787480-30787832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr10:43450749-43451144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr10:48257131-48257504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr10:55122954-55122565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 22
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr10:5543104-5543481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 61
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr10:19895539-19895167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 31
               

               
Conread position:
               
432-827
               

               
Cow position:
               
chr10:39939287-39939667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
432-838
               

               
Cow position:
               
chr10:15319048-15318640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
434-601
               

               
Cow position:
               
chr10:64877564-64877730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
434-637
               

               
Cow position:
               
chr10:54699562-54699760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
434-814
               

               
Cow position:
               
chr10:65551023-65550642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
435-622
               

               
Cow position:
               
chr10:33371535-33371345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
438-820
               

               
Cow position:
               
chr10:59839149-59839517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 9
               

               
Conread position:
               
440-692
               

               
Cow position:
               
chr10:33084299-33084544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
440-814
               

               
Cow position:
               
chr10:53247871-53248232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
190, 23
               

               
Conread position:
               
440-818
               

               
Cow position:
               
chr10:47543216-47542860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 38
               

               
Conread position:
               
448-632
               

               
Cow position:
               
chr10:55600023-55600206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
448-667
               

               
Cow position:
               
chr10:13197695-13197917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
448-805
               

               
Cow position:
               
chr10:33665971-33665624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
450-814
               

               
Cow position:
               
chr10:41802760-41803121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
90, 106
               

               
Conread position:
               
451-650
               

               
Cow position:
               
chr10:23379263-23379068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
451-804
               

               
Cow position:
               
chr10:51069197-51068842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
451-811
               

               
Cow position:
               
chr10:50360042-50359692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
451-820
               

               
Cow position:
               
chr10:13586838-13586482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
18, 183
               

               
Conread position:
               
451-820
               

               
Cow position:
               
chr10:29212079-29211726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
451-820
               

               
Cow position:
               
chr10:53973971-53973612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
306, 44
               

               
Conread position:
               
452-772
               

               
Cow position:
               
chr10:747598-747278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
171, 34
               

               
Conread position:
               
452-827
               

               
Cow position:
               
chr10:16414450-16414823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
166, 26
               

               
Conread position:
               
453-633
               

               
Cow position:
               
chr10:13927865-13927684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 165
               

               
Conread position:
               
453-820
               

               
Cow position:
               
chr10:16739941-16740289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
303, 34
               

               
Conread position:
               
454-814
               

               
Cow position:
               
chr10:66211166-66211523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
297, 36
               

               
Conread position:
               
455-667
               

               
Cow position:
               
chr10:25466192-25465981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
193, 14
               

               
Conread position:
               
455-820
               

               
Cow position:
               
chr10:23886334-23886681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
361, 13
               

               
Conread position:
               
456-772
               

               
Cow position:
               
chr10:8811831-8812129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
456-820
               

               
Cow position:
               
chr10:11213240-11212880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 145
               

               
Conread position:
               
457-814
               

               
Cow position:
               
chr10:10042984-10043318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
303, 10
               

               
Conread position:
               
457-820
               

               
Cow position:
               
chr10:20132401-20132759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 176
               

               
Conread position:
               
458-781
               

               
Cow position:
               
chr10:51696868-51696552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
459-812
               

               
Cow position:
               
chr10:35902829-35903168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 173
               

               
Conread position:
               
459-813
               

               
Cow position:
               
chr10:30360645-30360306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
459-813
               

               
Cow position:
               
chr10:48741037-48741381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
460-717
               

               
Cow position:
               
chr10:52120862-52120607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
461-820
               

               
Cow position:
               
chr10:48462226-48462570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
308, 10
               

               
Conread position:
               
463-747
               

               
Cow position:
               
chr10:6543844-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
463-814
               

               
Cow position:
               
chr10:11248101-11247748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 238
               

               
Conread position:
               
463-819
               

               
Cow position:
               
chr10:29919719-29920063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
463-820
               

               
Cow position:
               
chr10:23506372-23506717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
465-762
               

               
Cow position:
               
chr10:69587561-69587856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
239, 168
               

               
Conread position:
               
465-829
               

               
Cow position:
               
chr10:36002313-36001964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 28
               

               
Conread position:
               
466-601
               

               
Cow position:
               
chr10:39140437-39140301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
467-721
               

               
Cow position:
               
chr10:15309287-15309533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 173
               

               
Conread position:
               
467-812
               

               
Cow position:
               
chr10:58259410-58259738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
468-714
               

               
Cow position:
               
chr10:56180677-56180438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
468-747
               

               
Cow position:
               
chr10:47651411-47651149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
468-754
               

               
Cow position:
               
chr10:47725056-47724781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
468-805
               

               
Cow position:
               
chr10:3362741-3362403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
468-805
               

               
Cow position:
               
chr10:31373978-31374314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
468-814
               

               
Cow position:
               
chr10:22472439-22472090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
163, 209
               

               
Conread position:
               
468-820
               

               
Cow position:
               
chr10:24732419-24732078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
468-820
               

               
Cow position:
               
chr10:26209133-26209493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 148
               

               
Conread position:
               
468-820
               

               
Cow position:
               
chr10:59843793-59844155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
468-836
               

               
Cow position:
               
chr10:9774458-9774101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
276, 28
               

               
Conread position:
               
469-636
               

               
Cow position:
               
chr10:23923122-23922954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
469-665
               

               
Cow position:
               
chr10:35893793-35893991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
171, 61
               

               
Conread position:
               
469-667
               

               
Cow position:
               
chr10:53405586-53405393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
469-698
               

               
Cow position:
               
chr10:67581396-67581169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
469-723
               

               
Cow position:
               
chr10:13316052-13315803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
469-799
               

               
Cow position:
               
chr10:45679127-45678803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
287, 17
               

               
Conread position:
               
469-811
               

               
Cow position:
               
chr10:49455978-49456298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
469-812
               

               
Cow position:
               
chr10:77483-77167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
282, 30
               

               
Conread position:
               
469-812
               

               
Cow position:
               
chr10:46492880-46493226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 307
               

               
Conread position:
               
469-813
               

               
Cow position:
               
chr10:54477208-54476888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr10:668979-668657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr10:24022170-24022508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
175, 43
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr10:9083417-9083067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 176
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr10:15115726-15115383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr10:22049368-22049021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr10:35856941-35857287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 177
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr10:59588069-59588399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
286, 27
               

               
Conread position:
               
470-636
               

               
Cow position:
               
chr10:32573842-32573674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
470-725
               

               
Cow position:
               
chr10:53076226-53075981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
470-771
               

               
Cow position:
               
chr10:56683098-56683394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
470-814
               

               
Cow position:
               
chr10:40551629-40551289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 111
               

               
Conread position:
               
470-828
               

               
Cow position:
               
chr10:31779158-31779506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 26
               

               
Conread position:
               
470-838
               

               
Cow position:
               
chr10:24753255-24752908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
471-658
               

               
Cow position:
               
chr10:24902873-24903062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
471-814
               

               
Cow position:
               
chr10:44817885-44817558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
246, 146
               

               
Conread position:
               
471-824
               

               
Cow position:
               
chr10:2304270-2304614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
472-725
               

               
Cow position:
               
chr10:9578850-9579108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
472-816
               

               
Cow position:
               
chr10:34174868-34175223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
473-705
               

               
Cow position:
               
chr10:19098945-19098717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
473-820
               

               
Cow position:
               
chr10:61839692-61839368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
338, 55
               

               
Conread position:
               
474-729
               

               
Cow position:
               
chr10:69997692-69997948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
249, 0
               

               
Conread position:
               
474-820
               

               
Cow position:
               
chr10:35862122-35862462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 12
               

               
Conread position:
               
474-820
               

               
Cow position:
               
chr10:37415896-37415553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 13
               

               
Conread position:
               
474-820
               

               
Cow position:
               
chr10:56475576-56475237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
475-672
               

               
Cow position:
               
chr10:13918152-13918340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
475-760
               

               
Cow position:
               
chr10:4164375-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
279, 13
               

               
Conread position:
               
475-766
               

               
Cow position:
               
chr10:19549381-19549670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
475-768
               

               
Cow position:
               
chr10:4109694-4109410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
475-780
               

               
Cow position:
               
chr10:54948028-54948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
475-810
               

               
Cow position:
               
chr10:59572008-59571677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
279, 21
               

               
Conread position:
               
475-813
               

               
Cow position:
               
chr10:50558817-50559151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
160, 141
               

               
Conread position:
               
475-814
               

               
Cow position:
               
chr10:15871765-15872088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 167
               

               
Conread position:
               
475-820
               

               
Cow position:
               
chr10:721406-721067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
475-820
               

               
Cow position:
               
chr10:23055972-23056314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
475-820
               

               
Cow position:
               
chr10:37708910-37709269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
475-820
               

               
Cow position:
               
chr10:53674931-53674591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 12
               

               
Conread position:
               
476-648
               

               
Cow position:
               
chr10:2535676-2535506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
476-814
               

               
Cow position:
               
chr10:34430121-34430440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
477-779
               

               
Cow position:
               
chr10:47773833-47773536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
477-820
               

               
Cow position:
               
chr10:7366678-7367021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
477-820
               

               
Cow position:
               
chr10:37529160-37529501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 108
               

               
Conread position:
               
478-812
               

               
Cow position:
               
chr10:52113569-52113888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr10:2853536-2853871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
172, 18
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr10:20095872-20095529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 260
               

               
Conread position:
               
478-820
               

               
Cow position:
               
chr10:43509104-43508763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
479-714
               

               
Cow position:
               
chr10:15426978-15427196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
479-771
               

               
Cow position:
               
chr10:67288394-67288115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
479-775
               

               
Cow position:
               
chr10:21082484-21082195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
277, 150
               

               
Conread position:
               
479-813
               

               
Cow position:
               
chr10:8093215-8093539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
275, 17
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr10:1488936-1488624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr10:8404317-8403984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr10:9675360-9675681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
270, 92
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr10:21657525-21657188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr10:29252267-29251930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
277, 80
               

               
Conread position:
               
480-814
               

               
Cow position:
               
chr10:6408063-6407731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
480-814
               

               
Cow position:
               
chr10:10135090-10134753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
480-814
               

               
Cow position:
               
chr10:34661223-34661542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
196, 65
               

               
Conread position:
               
480-820
               

               
Cow position:
               
chr10:31362110-31362442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
480-824
               

               
Cow position:
               
chr10:59675148-59675491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
481-602
               

               
Cow position:
               
chr10:58638114-58637994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
481-802
               

               
Cow position:
               
chr10:46150972-46150669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
275, 119
               

               
Conread position:
               
481-814
               

               
Cow position:
               
chr10:44783448-44783116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
481-815
               

               
Cow position:
               
chr10:34819622-34819966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr10:54962614-54962951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
36, 246
               

               
Conread position:
               
481-838
               

               
Cow position:
               
chr10:15293367-15293024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 156
               

               
Conread position:
               
482-602
               

               
Cow position:
               
chr10:33462285-33462405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
482-814
               

               
Cow position:
               
chr10:6642990-6642655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
73, 183
               

               
Conread position:
               
482-814
               

               
Cow position:
               
chr10:24132723-24133045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
482-814
               

               
Cow position:
               
chr10:31791160-31791484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
482-820
               

               
Cow position:
               
chr10:3999011-3998673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 249
               

               
Conread position:
               
482-820
               

               
Cow position:
               
chr10:28670718-28671054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
482-829
               

               
Cow position:
               
chr10:40906416-40906072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
482-838
               

               
Cow position:
               
chr10:31466846-31466496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
273, 16
               

               
Conread position:
               
483-772
               

               
Cow position:
               
chr10:21447811-21448084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
483-814
               

               
Cow position:
               
chr10:28395202-28395517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
161, 180
               

               
Conread position:
               
484-679
               

               
Cow position:
               
chr10:17925975-17926173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
487-641
               

               
Cow position:
               
chr10:29091252-29091405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
488-683
               

               
Cow position:
               
chr10:15425144-15424955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
488-705
               

               
Cow position:
               
chr10:34660148-34660362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
488-804
               

               
Cow position:
               
chr10:59164013-59164311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr10:2849443-2849130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
269, 69
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr10:38513269-38512949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
488-820
               

               
Cow position:
               
chr10:1749679-1749343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
202, 79
               

               
Conread position:
               
489-725
               

               
Cow position:
               
chr10:22633532-22633765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
185, 142
               

               
Conread position:
               
489-801
               

               
Cow position:
               
chr10:37173353-37173665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
489-814
               

               
Cow position:
               
chr10:65133037-65132734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
243, 68
               

               
Conread position:
               
489-820
               

               
Cow position:
               
chr10:59151770-59152095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
490-711
               

               
Cow position:
               
chr10:12100451-12100675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
490-818
               

               
Cow position:
               
chr10:30455738-30456085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
490-820
               

               
Cow position:
               
chr10:30440954-30441277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
326, 132
               

               
Conread position:
               
491-734
               

               
Cow position:
               
chr10:44421814-44422052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
491-775
               

               
Cow position:
               
chr10:50134714-50134996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
491-820
               

               
Cow position:
               
chr10:37668065-37668392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
493-808
               

               
Cow position:
               
chr10:51861989-51862286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr10:35752873-35753185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
263, 66
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr10:52046960-52046631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 281
               

               
Conread position:
               
493-828
               

               
Cow position:
               
chr10:29279535-29279204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
130, 113
               

               
Conread position:
               
496-781
               

               
Cow position:
               
chr10:49045925-49045643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
235, 73
               

               
Conread position:
               
496-814
               

               
Cow position:
               
chr10:43438955-43438645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
226, 24
               

               
Conread position:
               
496-814
               

               
Cow position:
               
chr10:53336317-53336628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 231
               

               
Conread position:
               
496-820
               

               
Cow position:
               
chr10:24745206-24744896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
497-814
               

               
Cow position:
               
chr10:65423819-65424136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
256, 19
               

               
Conread position:
               
498-784
               

               
Cow position:
               
chr10:12486347-12486067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
498-813
               

               
Cow position:
               
chr10:33732788-33733093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 57
               

               
Conread position:
               
499-812
               

               
Cow position:
               
chr10:62516965-62516653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
499-828
               

               
Cow position:
               
chr10:20997204-20997515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
501-810
               

               
Cow position:
               
chr10:55930279-55929976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
501-820
               

               
Cow position:
               
chr10:13390966-13391285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
141, 164
               

               
Conread position:
               
502-814
               

               
Cow position:
               
chr10:24763563-24763254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
502-814
               

               
Cow position:
               
chr10:53357976-53357673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr10:11221783-11221478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
143, 99
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr10:22321603-22321287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
134, 114
               

               
Conread position:
               
502-828
               

               
Cow position:
               
chr10:22527821-22528139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 160
               

               
Conread position:
               
503-817
               

               
Cow position:
               
chr10:53934673-53934969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
202, 89
               

               
Conread position:
               
503-820
               

               
Cow position:
               
chr10:23936556-23936251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
503-838
               

               
Cow position:
               
chr10:41941486-41941828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
504-700
               

               
Cow position:
               
chr10:36107339-36107533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
504-724
               

               
Cow position:
               
chr10:533610-533390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
504-813
               

               
Cow position:
               
chr10:8923358-8923050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 142
               

               
Conread position:
               
505-814
               

               
Cow position:
               
chr10:47412029-47412333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 67
               

               
Conread position:
               
505-820
               

               
Cow position:
               
chr10:20897365-20897071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
311, 42
               

               
Conread position:
               
505-820
               

               
Cow position:
               
chr10:38014443-38014141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
511-796
               

               
Cow position:
               
chr10:8412061-8411789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
511-810
               

               
Cow position:
               
chr10:28152307-28152604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 150
               

               
Conread position:
               
511-814
               

               
Cow position:
               
chr10:13163379-13163672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
236, 15
               

               
Conread position:
               
512-818
               

               
Cow position:
               
chr10:35887326-35887635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
513-814
               

               
Cow position:
               
chr10:8412983-8413275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
515-820
               

               
Cow position:
               
chr10:36896472-36896173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 207
               

               
Conread position:
               
517-781
               

               
Cow position:
               
chr10:28038868-28039132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
184, 210
               

               
Conread position:
               
518-828
               

               
Cow position:
               
chr10:53084234-53083927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
232, 54
               

               
Conread position:
               
520-719
               

               
Cow position:
               
chr10:52069422-52069618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
520-778
               

               
Cow position:
               
chr10:54469331-54469586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
520-814
               

               
Cow position:
               
chr10:45770106-45769815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
520-814
               

               
Cow position:
               
chr10:49038647-49038337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr10:805252-804963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
296, 15
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr10:10964050-10963755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr10:29588777-29589072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
204, 113
               

               
Conread position:
               
523-747
               

               
Cow position:
               
chr10:21015928-21016149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr10:24548302-24548033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr10:24744598-24744323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
114, 103
               

               
Conread position:
               
530-820
               

               
Cow position:
               
chr10:21462295-21462009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
530-820
               

               
Cow position:
               
chr10:51314059-51313758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
531-820
               

               
Cow position:
               
chr10:15462543-15462267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
282, 195
               

               
Conread position:
               
531-820
               

               
Cow position:
               
chr10:30460705-30460413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
533-721
               

               
Cow position:
               
chr10:12919307-12919492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
535-799
               

               
Cow position:
               
chr10:39303799-39304062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
542-814
               

               
Cow position:
               
chr10:33891043-33891312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
164, 101
               

               
Conread position:
               
542-828
               

               
Cow position:
               
chr10:35767049-35767316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr10:22520129-22520398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 171
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr10:32029800-32030056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
268, 81
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr10:43287840-43288101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 13
               

               
Conread position:
               
551-820
               

               
Cow position:
               
chr10:49569228-49568973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
554-820
               

               
Cow position:
               
chr10:1088058-1087787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 182
               

               
Conread position:
               
556-725
               

               
Cow position:
               
chr10:331407-331237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
556-828
               

               
Cow position:
               
chr10:67717010-67716746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
199, 17
               

               
Conread position:
               
557-814
               

               
Cow position:
               
chr10:34906738-34906484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
560-767
               

               
Cow position:
               
chr10:24422133-24422340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
564-820
               

               
Cow position:
               
chr10:6173376-6173128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
570-766
               

               
Cow position:
               
chr10:64838998-64839196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
574-820
               

               
Cow position:
               
chr10:60032561-60032809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
107, 154
               

               
Conread position:
               
576-809
               

               
Cow position:
               
chr10:52029632-52029402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
576-818
               

               
Cow position:
               
chr10:47165876-47165647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
576-820
               

               
Cow position:
               
chr10:19094653-19094416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
579-724
               

               
Cow position:
               
chr10:37442311-37442166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
579-789
               

               
Cow position:
               
chr10:36285507-36285296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr10:15294371-15294132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr10:17584033-17584261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr10:37444214-37444448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
234, 148
               

               
Conread position:
               
579-828
               

               
Cow position:
               
chr10:5607648-5607406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
581-812
               

               
Cow position:
               
chr10:32093807-32093580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
582-820
               

               
Cow position:
               
chr10:57457336-57457100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
175, 46
               

               
Conread position:
               
588-771
               

               
Cow position:
               
chr10:39140177-39139999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
588-811
               

               
Cow position:
               
chr10:42115251-42115028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
588-813
               

               
Cow position:
               
chr10:52152523-52152299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
588-814
               

               
Cow position:
               
chr10:19402933-19402710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr10:9798200-9798425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
590-781
               

               
Cow position:
               
chr10:50200704-50200515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
590-811
               

               
Cow position:
               
chr10:6516189-6516408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
168, 48
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr10:48388278-48388491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
166, 52
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr10:18229723-18229945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
163, 49
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr10:54799609-54799393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr10:17983176-17982951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
226, 37
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr10:20505538-20505307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr10:31266340-31266560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
591-798
               

               
Cow position:
               
chr10:3985420-3985225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
591-810
               

               
Cow position:
               
chr10:31000596-31000822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
592-813
               

               
Cow position:
               
chr10:21708911-21709118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
592-814
               

               
Cow position:
               
chr10:18153836-18154057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 25
               

               
Conread position:
               
592-820
               

               
Cow position:
               
chr10:19678864-19678636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
162, 134
               

               
Conread position:
               
592-821
               

               
Cow position:
               
chr10:14975804-14976028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
593-798
               

               
Cow position:
               
chr10:28222912-28222719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
593-820
               

               
Cow position:
               
chr10:37822740-37822959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
163, 32
               

               
Conread position:
               
594-820
               

               
Cow position:
               
chr10:37528616-37528837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
595-814
               

               
Cow position:
               
chr10:65000118-65000339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
596-820
               

               
Cow position:
               
chr10:20735688-20735476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
220, 45
               

               
Conread position:
               
597-820
               

               
Cow position:
               
chr10:64878004-64878227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
598-814
               

               
Cow position:
               
chr10:6986432-6986224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
599-814
               

               
Cow position:
               
chr10:14098339-14098546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
606-813
               

               
Cow position:
               
chr10:22652677-22652471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
607-811
               

               
Cow position:
               
chr10:23447666-23447865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
613-820
               

               
Cow position:
               
chr10:24871860-24871653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
143, 116
               

               
Conread position:
               
631-820
               

               
Cow position:
               
chr10:32503403-32503218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
640-814
               

               
Cow position:
               
chr10:48377696-48377870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 86
               

               
Conread position:
               
640-820
               

               
Cow position:
               
chr10:46801061-46801236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
640-820
               

               
Cow position:
               
chr10:54936166-54936344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
641-814
               

               
Cow position:
               
chr10:7737745-7737566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
642-813
               

               
Cow position:
               
chr10:8923881-8923711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 87
               

               
Conread position:
               
643-812
               

               
Cow position:
               
chr10:60936887-60936730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
643-814
               

               
Cow position:
               
chr10:38223659-38223826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
644-813
               

               
Cow position:
               
chr10:888866-888702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
644-820
               

               
Cow position:
               
chr10:57736221-57736396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 85
               

               
Conread position:
               
659-820
               

               
Cow position:
               
chr10:23376537-23376695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
676-819
               

               
Cow position:
               
chr10:2708289-2708148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
676-828
               

               
Cow position:
               
chr10:6345987-6345835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
677-820
               

               
Cow position:
               
chr10:23500302-23500448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
685-820
               

               
Cow position:
               
chr10:5113490-5113354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
685-820
               

               
Cow position:
               
chr10:35715809-35715942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 44
               
Show alignments to all cow chromosomes.