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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063I05.3
        

               
Conread position:
               
354-831
               

               
Cow position:
               
chr15:4789122-4788665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
355-820
               

               
Cow position:
               
chr15:49257706-49258174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
356-820
               

               
Cow position:
               
chr15:35641853-35642317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
357-561
               

               
Cow position:
               
chr15:7811687-7811485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
358-814
               

               
Cow position:
               
chr15:29809967-29810399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
358-815
               

               
Cow position:
               
chr15:30047709-30047248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr15:16415143-16415370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
360-619
               

               
Cow position:
               
chr15:22444136-22443886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
360-635
               

               
Cow position:
               
chr15:8464280-8464012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
360-814
               

               
Cow position:
               
chr15:36435053-36435500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
360-828
               

               
Cow position:
               
chr15:44658218-44658663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
361-649
               

               
Cow position:
               
chr15:15154141-15154431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
12, 163
               

               
Conread position:
               
361-828
               

               
Cow position:
               
chr15:7429812-7430284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
362-820
               

               
Cow position:
               
chr15:17100855-17100417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
364-600
               

               
Cow position:
               
chr15:17124620-17124385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
364-625
               

               
Cow position:
               
chr15:19002438-19002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
364-643
               

               
Cow position:
               
chr15:20856631-20856350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
364-794
               

               
Cow position:
               
chr15:21583072-21582649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
364-814
               

               
Cow position:
               
chr15:21822075-21821630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
368-604
               

               
Cow position:
               
chr15:28067852-28067625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
368-820
               

               
Cow position:
               
chr15:5682994-5683431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
369-567
               

               
Cow position:
               
chr15:43634174-43633984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
370-818
               

               
Cow position:
               
chr15:51460095-51460521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
371-614
               

               
Cow position:
               
chr15:46364633-46364869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
372-662
               

               
Cow position:
               
chr15:19554062-19553780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
372-812
               

               
Cow position:
               
chr15:16928229-16927790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 10
               

               
Conread position:
               
372-820
               

               
Cow position:
               
chr15:22939464-22939036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
373-634
               

               
Cow position:
               
chr15:1284124-1284389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
151, 8
               

               
Conread position:
               
373-761
               

               
Cow position:
               
chr15:286336-286719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
373-814
               

               
Cow position:
               
chr15:25208897-25208475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
373-815
               

               
Cow position:
               
chr15:33642949-33643377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
374-592
               

               
Cow position:
               
chr15:48052737-48052529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
374-622
               

               
Cow position:
               
chr15:7479135-7478891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
374-667
               

               
Cow position:
               
chr15:11614229-11613942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
256, 8
               

               
Conread position:
               
374-672
               

               
Cow position:
               
chr15:15177181-15177467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
374-725
               

               
Cow position:
               
chr15:43114860-43114517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
374-814
               

               
Cow position:
               
chr15:51822014-51822438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
374-816
               

               
Cow position:
               
chr15:30985910-30985487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
375-698
               

               
Cow position:
               
chr15:29541727-29542059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
376-691
               

               
Cow position:
               
chr15:15987033-15986711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 282
               

               
Conread position:
               
376-820
               

               
Cow position:
               
chr15:6969846-6970283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
377-629
               

               
Cow position:
               
chr15:9879515-9879265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
377-629
               

               
Cow position:
               
chr15:26442074-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
378-820
               

               
Cow position:
               
chr15:14505303-14505723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
380-812
               

               
Cow position:
               
chr15:19402871-19403266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
380-814
               

               
Cow position:
               
chr15:1301013-1301430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
380-820
               

               
Cow position:
               
chr15:4919200-4918755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
381-601
               

               
Cow position:
               
chr15:52791807-52792021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
381-635
               

               
Cow position:
               
chr15:7751047-7750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
382-599
               

               
Cow position:
               
chr15:12045674-12045455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
382-622
               

               
Cow position:
               
chr15:48095225-48095465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
382-637
               

               
Cow position:
               
chr15:50953795-50953548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
382-646
               

               
Cow position:
               
chr15:26851356-26851097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
382-749
               

               
Cow position:
               
chr15:36353541-36353895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
262, 21
               

               
Conread position:
               
382-768
               

               
Cow position:
               
chr15:24616435-24616821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
382-788
               

               
Cow position:
               
chr15:23572819-23572415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
382-812
               

               
Cow position:
               
chr15:2968204-2968621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
382-814
               

               
Cow position:
               
chr15:20534583-20534160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
382-820
               

               
Cow position:
               
chr15:26896827-26896414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
383-636
               

               
Cow position:
               
chr15:37970672-37970931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
383-813
               

               
Cow position:
               
chr15:43827903-43827483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
383-838
               

               
Cow position:
               
chr15:32226987-32226573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
245, 15
               

               
Conread position:
               
385-644
               

               
Cow position:
               
chr15:17687377-17687644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 158
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr15:21366319-21365900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
386-597
               

               
Cow position:
               
chr15:44977686-44977896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
386-813
               

               
Cow position:
               
chr15:38161873-38162297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
386-814
               

               
Cow position:
               
chr15:20390837-20390408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
249, 32
               

               
Conread position:
               
386-814
               

               
Cow position:
               
chr15:21941979-21941555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr15:225931-225506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
387-559
               

               
Cow position:
               
chr15:26380874-26380702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 102
               

               
Conread position:
               
387-567
               

               
Cow position:
               
chr15:40562810-40562632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
387-583
               

               
Cow position:
               
chr15:8715308-8715116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
387-602
               

               
Cow position:
               
chr15:4334036-4333838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
387-642
               

               
Cow position:
               
chr15:38861972-38862219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
387-754
               

               
Cow position:
               
chr15:16017907-16018266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
387-789
               

               
Cow position:
               
chr15:275517-275912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 194
               

               
Conread position:
               
387-808
               

               
Cow position:
               
chr15:608011-608434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr15:6227302-6226908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr15:39373578-39373139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr15:45478872-45479297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr15:6905412-6905838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr15:11658709-11658268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr15:12304514-12304938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
388-600
               

               
Cow position:
               
chr15:21710234-21710024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 90
               

               
Conread position:
               
388-637
               

               
Cow position:
               
chr15:49491526-49491762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
388-757
               

               
Cow position:
               
chr15:1857601-1857962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
388-810
               

               
Cow position:
               
chr15:8665731-8665296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
388-814
               

               
Cow position:
               
chr15:3700410-3699992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
389-742
               

               
Cow position:
               
chr15:30471104-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 246
               

               
Conread position:
               
389-783
               

               
Cow position:
               
chr15:11560646-11560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
389-814
               

               
Cow position:
               
chr15:53163897-53164312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr15:40798542-40798128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
389-828
               

               
Cow position:
               
chr15:4138008-4138440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
390-781
               

               
Cow position:
               
chr15:19771012-19771392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
390-828
               

               
Cow position:
               
chr15:50957934-50957492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
391-600
               

               
Cow position:
               
chr15:25451880-25452093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
391-602
               

               
Cow position:
               
chr15:25595650-25595443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
391-641
               

               
Cow position:
               
chr15:38652725-38652476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
391-689
               

               
Cow position:
               
chr15:41625020-41624717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
391-705
               

               
Cow position:
               
chr15:10400397-10400085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
391-721
               

               
Cow position:
               
chr15:5409017-5408702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
391-721
               

               
Cow position:
               
chr15:33693495-33693161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
391-745
               

               
Cow position:
               
chr15:20314360-20314711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
391-804
               

               
Cow position:
               
chr15:42142750-42143135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr15:12785304-12785726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr15:25667347-25666933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr15:35839219-35838800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr15:27900634-27900207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
392-722
               

               
Cow position:
               
chr15:40379089-40379414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
392-745
               

               
Cow position:
               
chr15:5158250-5158604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
392-825
               

               
Cow position:
               
chr15:23697023-23696614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
392-828
               

               
Cow position:
               
chr15:17233065-17233497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 248
               

               
Conread position:
               
393-814
               

               
Cow position:
               
chr15:17196030-17196435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
395-819
               

               
Cow position:
               
chr15:53101463-53101888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
398-820
               

               
Cow position:
               
chr15:12722969-12723383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 173
               

               
Conread position:
               
399-567
               

               
Cow position:
               
chr15:20566014-20566181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
399-599
               

               
Cow position:
               
chr15:44119583-44119389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
399-633
               

               
Cow position:
               
chr15:16530886-16530652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
399-683
               

               
Cow position:
               
chr15:42888949-42888674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
399-772
               

               
Cow position:
               
chr15:34139875-34140229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
399-814
               

               
Cow position:
               
chr15:17084091-17084502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
399-814
               

               
Cow position:
               
chr15:24128548-24128939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
400-568
               

               
Cow position:
               
chr15:17621434-17621267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
400-633
               

               
Cow position:
               
chr15:42380815-42381044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
172, 18
               

               
Conread position:
               
400-636
               

               
Cow position:
               
chr15:47844201-47843974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
400-724
               

               
Cow position:
               
chr15:31929011-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
400-726
               

               
Cow position:
               
chr15:662577-662261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
400-751
               

               
Cow position:
               
chr15:10231856-10231513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
400-796
               

               
Cow position:
               
chr15:38837631-38838022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
402-814
               

               
Cow position:
               
chr15:15041539-15041145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
403-598
               

               
Cow position:
               
chr15:44089275-44089081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
403-602
               

               
Cow position:
               
chr15:13863844-13863647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
403-613
               

               
Cow position:
               
chr15:49483514-49483724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
403-614
               

               
Cow position:
               
chr15:26529786-26529987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
403-649
               

               
Cow position:
               
chr15:41056321-41056072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
403-667
               

               
Cow position:
               
chr15:36952309-36952052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
403-698
               

               
Cow position:
               
chr15:29686452-29686730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
403-721
               

               
Cow position:
               
chr15:37865250-37865567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 302
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr15:34284519-34284208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
135, 74
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr15:36643956-36643653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr15:43674056-43673734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
403-725
               

               
Cow position:
               
chr15:5717609-5717915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-727
               

               
Cow position:
               
chr15:6233125-6232808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
403-776
               

               
Cow position:
               
chr15:4295650-4296020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 82
               

               
Conread position:
               
403-811
               

               
Cow position:
               
chr15:31137575-31137174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr15:22531563-22531951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr15:43914208-43913795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr15:36391561-36391962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-817
               

               
Cow position:
               
chr15:43031136-43030727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
403-819
               

               
Cow position:
               
chr15:17870403-17870000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr15:795127-794716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr15:11996138-11995728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr15:20472654-20472249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr15:22938877-22938480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr15:36621291-36621715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 66
               

               
Conread position:
               
405-768
               

               
Cow position:
               
chr15:5726207-5726572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
406-784
               

               
Cow position:
               
chr15:23275427-23275798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 236
               

               
Conread position:
               
406-814
               

               
Cow position:
               
chr15:52482935-52482537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
412-820
               

               
Cow position:
               
chr15:21420844-21421239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
415-599
               

               
Cow position:
               
chr15:9921864-9921686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
415-820
               

               
Cow position:
               
chr15:16583792-16583414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
418-601
               

               
Cow position:
               
chr15:29793299-29793109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
418-638
               

               
Cow position:
               
chr15:21903504-21903289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
418-658
               

               
Cow position:
               
chr15:36388202-36388431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
418-690
               

               
Cow position:
               
chr15:41528063-41527806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
418-742
               

               
Cow position:
               
chr15:23866166-23865848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
212, 66
               

               
Conread position:
               
418-772
               

               
Cow position:
               
chr15:11559449-11559105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
418-797
               

               
Cow position:
               
chr15:85343-84974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
418-813
               

               
Cow position:
               
chr15:39599352-39599729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
418-820
               

               
Cow position:
               
chr15:10246092-10245710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
418-824
               

               
Cow position:
               
chr15:1083467-1083072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
336, 60
               

               
Conread position:
               
419-650
               

               
Cow position:
               
chr15:24453170-24452942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
419-804
               

               
Cow position:
               
chr15:39619046-39619438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
200, 49
               

               
Conread position:
               
419-820
               

               
Cow position:
               
chr15:21893684-21894079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
420-627
               

               
Cow position:
               
chr15:50332883-50333090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
420-667
               

               
Cow position:
               
chr15:38860224-38859981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
420-700
               

               
Cow position:
               
chr15:39833070-39832795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
210, 66
               

               
Conread position:
               
421-820
               

               
Cow position:
               
chr15:6168624-6168218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
421-820
               

               
Cow position:
               
chr15:33284785-33285179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 26
               

               
Conread position:
               
422-644
               

               
Cow position:
               
chr15:52432249-52432473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 6
               

               
Conread position:
               
422-772
               

               
Cow position:
               
chr15:10608402-10608054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
426-812
               

               
Cow position:
               
chr15:26912161-26911791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
426-820
               

               
Cow position:
               
chr15:19186704-19186318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 129
               

               
Conread position:
               
428-599
               

               
Cow position:
               
chr15:16644872-16644704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
428-622
               

               
Cow position:
               
chr15:4248064-4248253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
428-622
               

               
Cow position:
               
chr15:7956162-7955967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
428-637
               

               
Cow position:
               
chr15:13783052-13782846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
428-641
               

               
Cow position:
               
chr15:22984484-22984696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
428-648
               

               
Cow position:
               
chr15:31637211-31637432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
428-683
               

               
Cow position:
               
chr15:40015089-40014836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-683
               

               
Cow position:
               
chr15:41053855-41053603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
428-692
               

               
Cow position:
               
chr15:40231034-40231289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-714
               

               
Cow position:
               
chr15:11424889-11425167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
178, 58
               

               
Conread position:
               
428-715
               

               
Cow position:
               
chr15:19807807-19807522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
428-717
               

               
Cow position:
               
chr15:38935320-38935605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
428-728
               

               
Cow position:
               
chr15:36635945-36636246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 200
               

               
Conread position:
               
428-729
               

               
Cow position:
               
chr15:9465590-9465887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
206, 50
               

               
Conread position:
               
428-745
               

               
Cow position:
               
chr15:24804884-24804566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
210, 58
               

               
Conread position:
               
428-749
               

               
Cow position:
               
chr15:49273878-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
428-754
               

               
Cow position:
               
chr15:7308242-7307921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
428-754
               

               
Cow position:
               
chr15:22930434-22930108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
202, 23
               

               
Conread position:
               
428-757
               

               
Cow position:
               
chr15:11987493-11987176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
428-767
               

               
Cow position:
               
chr15:22553625-22553299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
218, 49
               

               
Conread position:
               
428-780
               

               
Cow position:
               
chr15:17762824-17763165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
212, 58
               

               
Conread position:
               
428-784
               

               
Cow position:
               
chr15:16657386-16657757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
428-802
               

               
Cow position:
               
chr15:4485064-4485423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
428-805
               

               
Cow position:
               
chr15:4861991-4861629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
328, 58
               

               
Conread position:
               
428-809
               

               
Cow position:
               
chr15:45584638-45585010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr15:16667582-16667211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 58
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr15:38883058-38883444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:1330193-1329809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 206
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:20370536-20370173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:21803749-21803367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 124
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:22532169-22532531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:24031113-24031470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:25585176-25584799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:27123619-27123260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
328, 58
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:32980118-32979744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:38394343-38394710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr15:38806589-38806205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 59
               

               
Conread position:
               
428-819
               

               
Cow position:
               
chr15:20459395-20459005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr15:14740771-14740374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr15:21832524-21832127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr15:24797887-24797516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
296, 18
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr15:30001612-30001987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr15:37381545-37381928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 41
               

               
Conread position:
               
428-823
               

               
Cow position:
               
chr15:8006894-8007282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
113, 52
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr15:2953217-2952826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 41
               

               
Conread position:
               
428-829
               

               
Cow position:
               
chr15:17353746-17353346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
429-597
               

               
Cow position:
               
chr15:4500615-4500783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
429-617
               

               
Cow position:
               
chr15:38420638-38420453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
429-638
               

               
Cow position:
               
chr15:6102244-6102042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
429-642
               

               
Cow position:
               
chr15:8679842-8679631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
429-649
               

               
Cow position:
               
chr15:13701855-13701635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 57
               

               
Conread position:
               
429-662
               

               
Cow position:
               
chr15:34273715-34273945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
429-666
               

               
Cow position:
               
chr15:16664198-16664437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
167, 48
               

               
Conread position:
               
429-705
               

               
Cow position:
               
chr15:52126773-52126508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
429-766
               

               
Cow position:
               
chr15:8353958-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
325, 59
               

               
Conread position:
               
429-802
               

               
Cow position:
               
chr15:32324291-32323927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
429-809
               

               
Cow position:
               
chr15:16439917-16439540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 57
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr15:21608806-21608441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
429-817
               

               
Cow position:
               
chr15:45509-45123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr15:4677081-4676709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr15:5072181-5071803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr15:39405659-39406032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 48
               

               
Conread position:
               
429-828
               

               
Cow position:
               
chr15:16112311-16112708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
431-619
               

               
Cow position:
               
chr15:39520076-39520270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
432-749
               

               
Cow position:
               
chr15:4179019-4178710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
432-813
               

               
Cow position:
               
chr15:43626385-43626751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr15:8579217-8578826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr15:26903113-26903484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr15:31948923-31949290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
287, 57
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr15:44051561-44051207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
324, 46
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr15:28924838-28924469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 41
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr15:31857509-31857889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
432-828
               

               
Cow position:
               
chr15:26158679-26158314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
322, 45
               

               
Conread position:
               
434-642
               

               
Cow position:
               
chr15:864102-864302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
434-700
               

               
Cow position:
               
chr15:39286489-39286232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
434-777
               

               
Cow position:
               
chr15:32241897-32242235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
188, 56
               

               
Conread position:
               
436-715
               

               
Cow position:
               
chr15:36793573-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
193, 54
               

               
Conread position:
               
436-814
               

               
Cow position:
               
chr15:41225648-41225271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
436-820
               

               
Cow position:
               
chr15:50341037-50341412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
437-761
               

               
Cow position:
               
chr15:50265563-50265249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
440-754
               

               
Cow position:
               
chr15:10512341-10512039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
202, 41
               

               
Conread position:
               
440-772
               

               
Cow position:
               
chr15:25386366-25386694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
440-814
               

               
Cow position:
               
chr15:6647379-6647736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
196, 28
               

               
Conread position:
               
440-814
               

               
Cow position:
               
chr15:23114759-23115125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
445-820
               

               
Cow position:
               
chr15:39621264-39621635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 311
               

               
Conread position:
               
448-757
               

               
Cow position:
               
chr15:18671517-18671217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
188, 37
               

               
Conread position:
               
448-781
               

               
Cow position:
               
chr15:362959-363285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
190, 33
               

               
Conread position:
               
448-804
               

               
Cow position:
               
chr15:23530655-23531001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
448-805
               

               
Cow position:
               
chr15:244715-245055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
187, 40
               

               
Conread position:
               
448-813
               

               
Cow position:
               
chr15:49922071-49922429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 21
               

               
Conread position:
               
448-826
               

               
Cow position:
               
chr15:51898161-51898532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
450-807
               

               
Cow position:
               
chr15:41045340-41045688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
451-754
               

               
Cow position:
               
chr15:915903-915614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
451-820
               

               
Cow position:
               
chr15:52778585-52778232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
365, 17
               

               
Conread position:
               
453-813
               

               
Cow position:
               
chr15:24284916-24285274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
465-714
               

               
Cow position:
               
chr15:53266261-53266010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
465-772
               

               
Cow position:
               
chr15:10737794-10737497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
465-813
               

               
Cow position:
               
chr15:45245596-45245258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
199, 231
               

               
Conread position:
               
467-814
               

               
Cow position:
               
chr15:46868765-46868423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
467-814
               

               
Cow position:
               
chr15:53353599-53353262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 151
               

               
Conread position:
               
468-622
               

               
Cow position:
               
chr15:18776801-18776646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
468-730
               

               
Cow position:
               
chr15:35205202-35204938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
468-814
               

               
Cow position:
               
chr15:47042680-47042347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 172
               

               
Conread position:
               
468-821
               

               
Cow position:
               
chr15:16616144-16616492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
469-659
               

               
Cow position:
               
chr15:44280054-44280242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
469-753
               

               
Cow position:
               
chr15:47592711-47592428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
161, 71
               

               
Conread position:
               
469-754
               

               
Cow position:
               
chr15:12870912-12870632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
469-762
               

               
Cow position:
               
chr15:5566880-5567184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
469-775
               

               
Cow position:
               
chr15:12655963-12655657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
469-781
               

               
Cow position:
               
chr15:39316890-39316574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 211
               

               
Conread position:
               
469-794
               

               
Cow position:
               
chr15:22871566-22871880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
284, 79
               

               
Conread position:
               
469-809
               

               
Cow position:
               
chr15:21389211-21388880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 33
               

               
Conread position:
               
469-813
               

               
Cow position:
               
chr15:33303274-33303622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 343
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr15:33976743-33976396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 209
               

               
Conread position:
               
470-667
               

               
Cow position:
               
chr15:26718969-26718773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr15:13554307-13554638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 26
               

               
Conread position:
               
470-828
               

               
Cow position:
               
chr15:26573333-26573690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
471-668
               

               
Cow position:
               
chr15:50660573-50660779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
471-695
               

               
Cow position:
               
chr15:25322793-25322571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
203, 27
               

               
Conread position:
               
471-720
               

               
Cow position:
               
chr15:21166468-21166216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
472-812
               

               
Cow position:
               
chr15:42789193-42788862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 160
               

               
Conread position:
               
473-731
               

               
Cow position:
               
chr15:31560433-31560191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
473-820
               

               
Cow position:
               
chr15:52611259-52611610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
105, 187
               

               
Conread position:
               
474-664
               

               
Cow position:
               
chr15:14281506-14281696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
474-752
               

               
Cow position:
               
chr15:14576285-14576564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
157, 226
               

               
Conread position:
               
475-667
               

               
Cow position:
               
chr15:38827366-38827177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
475-762
               

               
Cow position:
               
chr15:35112926-35112636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
475-812
               

               
Cow position:
               
chr15:16822897-16823225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
274, 73
               

               
Conread position:
               
475-828
               

               
Cow position:
               
chr15:23798573-23798217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
475-830
               

               
Cow position:
               
chr15:1722892-1722546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 135
               

               
Conread position:
               
476-820
               

               
Cow position:
               
chr15:50322556-50322892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 32
               

               
Conread position:
               
478-672
               

               
Cow position:
               
chr15:14176538-14176347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
478-710
               

               
Cow position:
               
chr15:35441117-35440885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
157, 95
               

               
Conread position:
               
478-737
               

               
Cow position:
               
chr15:5929858-5930107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
478-796
               

               
Cow position:
               
chr15:23180401-23180703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
478-820
               

               
Cow position:
               
chr15:26919314-26918976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 150
               

               
Conread position:
               
479-642
               

               
Cow position:
               
chr15:5535398-5535235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
479-753
               

               
Cow position:
               
chr15:9106996-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
479-754
               

               
Cow position:
               
chr15:20422819-20422547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
479-812
               

               
Cow position:
               
chr15:2141341-2141007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
157, 196
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr15:1297701-1298027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 159
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr15:5235035-5234707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 96
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr15:29604738-29604420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
276, 152
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr15:33306072-33306405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
480-672
               

               
Cow position:
               
chr15:6272924-6272735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
480-718
               

               
Cow position:
               
chr15:19950442-19950672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
480-749
               

               
Cow position:
               
chr15:17337325-17337585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
481-767
               

               
Cow position:
               
chr15:24941398-24941129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
481-767
               

               
Cow position:
               
chr15:53037001-53036722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
169, 91
               

               
Conread position:
               
481-814
               

               
Cow position:
               
chr15:52454395-52454735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr15:15880890-15881232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 170
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr15:50302148-50302482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
482-672
               

               
Cow position:
               
chr15:9497535-9497347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
483-820
               

               
Cow position:
               
chr15:16603791-16604119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
152, 118
               

               
Conread position:
               
483-831
               

               
Cow position:
               
chr15:36773727-36773387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
484-820
               

               
Cow position:
               
chr15:27973250-27972918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
485-820
               

               
Cow position:
               
chr15:144280-143934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 178
               

               
Conread position:
               
488-691
               

               
Cow position:
               
chr15:16908404-16908603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
149, 161
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr15:41000098-40999769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
488-820
               

               
Cow position:
               
chr15:16307392-16307713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
489-740
               

               
Cow position:
               
chr15:9781443-9781684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
489-808
               

               
Cow position:
               
chr15:6530876-6530559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
262, 156
               

               
Conread position:
               
490-683
               

               
Cow position:
               
chr15:31042841-31043032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
490-809
               

               
Cow position:
               
chr15:47843278-47842973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 173
               

               
Conread position:
               
490-812
               

               
Cow position:
               
chr15:1804365-1804040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
490-820
               

               
Cow position:
               
chr15:41418856-41418520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
490-828
               

               
Cow position:
               
chr15:22136663-22136985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
491-725
               

               
Cow position:
               
chr15:28258483-28258250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
492-651
               

               
Cow position:
               
chr15:23719508-23719349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
493-693
               

               
Cow position:
               
chr15:50088956-50089157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr15:17261187-17260866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
495-714
               

               
Cow position:
               
chr15:10660577-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
496-735
               

               
Cow position:
               
chr15:39326538-39326299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
496-814
               

               
Cow position:
               
chr15:7192283-7191971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 176
               

               
Conread position:
               
497-754
               

               
Cow position:
               
chr15:37205028-37205276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
499-814
               

               
Cow position:
               
chr15:23768275-23767975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
502-727
               

               
Cow position:
               
chr15:35425824-35425605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
199, 62
               

               
Conread position:
               
502-794
               

               
Cow position:
               
chr15:44640881-44641168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
502-814
               

               
Cow position:
               
chr15:4093948-4093634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
253, 129
               

               
Conread position:
               
502-814
               

               
Cow position:
               
chr15:20351817-20352124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 134
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr15:14870728-14871043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr15:47821801-47822098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
314, 66
               

               
Conread position:
               
503-777
               

               
Cow position:
               
chr15:26404269-26404531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
252, 70
               

               
Conread position:
               
505-820
               

               
Cow position:
               
chr15:20391288-20390981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
511-814
               

               
Cow position:
               
chr15:42415248-42415548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
511-820
               

               
Cow position:
               
chr15:6657093-6657404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
511-820
               

               
Cow position:
               
chr15:23568133-23567829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
175, 129
               

               
Conread position:
               
520-811
               

               
Cow position:
               
chr15:16639780-16640071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr15:5729944-5730234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr15:11011600-11011312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
235, 119
               

               
Conread position:
               
523-790
               

               
Cow position:
               
chr15:47280133-47279870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
523-814
               

               
Cow position:
               
chr15:18720320-18720604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
229, 72
               

               
Conread position:
               
524-690
               

               
Cow position:
               
chr15:4461040-4460876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
524-820
               

               
Cow position:
               
chr15:13515373-13515669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 202
               

               
Conread position:
               
530-809
               

               
Cow position:
               
chr15:35417612-35417336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
531-820
               

               
Cow position:
               
chr15:4534925-4535204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
533-813
               

               
Cow position:
               
chr15:9526462-9526179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 119
               

               
Conread position:
               
536-820
               

               
Cow position:
               
chr15:41620169-41619890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 8
               

               
Conread position:
               
539-812
               

               
Cow position:
               
chr15:7456719-7456985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
217, 17
               

               
Conread position:
               
540-790
               

               
Cow position:
               
chr15:17859202-17858968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
216, 8
               

               
Conread position:
               
542-814
               

               
Cow position:
               
chr15:9494272-9494003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
550-805
               

               
Cow position:
               
chr15:21907968-21908218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
206, 81
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr15:5632714-5632969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr15:27280904-27281161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
203, 65
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr15:45322814-45323081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
553-806
               

               
Cow position:
               
chr15:38877268-38877021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
201, 121
               

               
Conread position:
               
556-779
               

               
Cow position:
               
chr15:16904669-16904882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
556-813
               

               
Cow position:
               
chr15:9871375-9871121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
556-820
               

               
Cow position:
               
chr15:16448722-16449001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
557-813
               

               
Cow position:
               
chr15:18206472-18206223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
199, 32
               

               
Conread position:
               
557-814
               

               
Cow position:
               
chr15:19119572-19119321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 175
               

               
Conread position:
               
557-820
               

               
Cow position:
               
chr15:37716890-37716624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
167, 15
               

               
Conread position:
               
558-820
               

               
Cow position:
               
chr15:30820796-30820538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
559-813
               

               
Cow position:
               
chr15:25306587-25306833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
559-820
               

               
Cow position:
               
chr15:36782283-36782035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
257, 79
               

               
Conread position:
               
566-820
               

               
Cow position:
               
chr15:47105089-47105334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
570-812
               

               
Cow position:
               
chr15:24305429-24305190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
187, 125
               

               
Conread position:
               
573-784
               

               
Cow position:
               
chr15:12441769-12441561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
579-781
               

               
Cow position:
               
chr15:14856405-14856208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
190, 61
               

               
Conread position:
               
582-820
               

               
Cow position:
               
chr15:5498969-5498732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
585-814
               

               
Cow position:
               
chr15:10845787-10846012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
162, 54
               

               
Conread position:
               
585-816
               

               
Cow position:
               
chr15:34104325-34104558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
587-820
               

               
Cow position:
               
chr15:40009584-40009353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
589-754
               

               
Cow position:
               
chr15:13684196-13684035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
589-814
               

               
Cow position:
               
chr15:20725544-20725324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
589-814
               

               
Cow position:
               
chr15:23702851-23703063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr15:4350530-4350310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr15:6046243-6046023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr15:38898496-38898715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
157, 39
               

               
Conread position:
               
590-816
               

               
Cow position:
               
chr15:52380361-52380583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
590-818
               

               
Cow position:
               
chr15:23927401-23927174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr15:4501059-4501277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
590-833
               

               
Cow position:
               
chr15:34145081-34144846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
239, 41
               

               
Conread position:
               
591-767
               

               
Cow position:
               
chr15:16936774-16936597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
592-832
               

               
Cow position:
               
chr15:37777425-37777658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
605-819
               

               
Cow position:
               
chr15:51632949-51632755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
606-814
               

               
Cow position:
               
chr15:21522875-21523080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
607-820
               

               
Cow position:
               
chr15:12316016-12316221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
626-813
               

               
Cow position:
               
chr15:45216927-45217109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
634-811
               

               
Cow position:
               
chr15:41583024-41583197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
638-837
               

               
Cow position:
               
chr15:7827919-7827728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
640-820
               

               
Cow position:
               
chr15:33314327-33314150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
640-820
               

               
Cow position:
               
chr15:38846224-38846393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 36
               

               
Conread position:
               
642-814
               

               
Cow position:
               
chr15:36346882-36347059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
642-820
               

               
Cow position:
               
chr15:29792787-29792615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
643-814
               

               
Cow position:
               
chr15:49738922-49738757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
655-820
               

               
Cow position:
               
chr15:9062460-9062297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
686-814
               

               
Cow position:
               
chr15:31085702-31085824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               
Show alignments to all cow chromosomes.