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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063I05.3
        

               
Conread position:
               
351-653
               

               
Cow position:
               
chr17:6270063-6269743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
352-603
               

               
Cow position:
               
chr17:7732827-7733074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
354-729
               

               
Cow position:
               
chr17:36864906-36864551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
356-697
               

               
Cow position:
               
chr17:18934541-18934209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
357-635
               

               
Cow position:
               
chr17:5012136-5011850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
357-780
               

               
Cow position:
               
chr17:18202050-18201635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
357-814
               

               
Cow position:
               
chr17:34078830-34079258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
357-819
               

               
Cow position:
               
chr17:12306116-12306561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
358-598
               

               
Cow position:
               
chr17:16438436-16438672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
358-828
               

               
Cow position:
               
chr17:20032617-20033089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
359-820
               

               
Cow position:
               
chr17:21972846-21973300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
360-667
               

               
Cow position:
               
chr17:17044051-17044351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
360-781
               

               
Cow position:
               
chr17:18720167-18720584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
361-636
               

               
Cow position:
               
chr17:24841979-24841706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
361-796
               

               
Cow position:
               
chr17:33271381-33271829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 204
               

               
Conread position:
               
361-814
               

               
Cow position:
               
chr17:32027169-32027622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
362-582
               

               
Cow position:
               
chr17:17265855-17266070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
194, 12
               

               
Conread position:
               
362-596
               

               
Cow position:
               
chr17:10221926-10222159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
362-617
               

               
Cow position:
               
chr17:14024343-14024601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
365-629
               

               
Cow position:
               
chr17:25467263-25467005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
365-651
               

               
Cow position:
               
chr17:7959460-7959176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
368-814
               

               
Cow position:
               
chr17:26631534-26631976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
369-583
               

               
Cow position:
               
chr17:21236796-21236586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
369-725
               

               
Cow position:
               
chr17:34860647-34860307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
369-820
               

               
Cow position:
               
chr17:20932602-20932162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
371-618
               

               
Cow position:
               
chr17:1463055-1463302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
372-818
               

               
Cow position:
               
chr17:36454504-36454930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
372-820
               

               
Cow position:
               
chr17:17222612-17222175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
372-820
               

               
Cow position:
               
chr17:27795925-27795481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
373-594
               

               
Cow position:
               
chr17:5761881-5762102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
373-638
               

               
Cow position:
               
chr17:15355204-15354940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
373-761
               

               
Cow position:
               
chr17:15303704-15304095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
373-821
               

               
Cow position:
               
chr17:25612356-25611925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
374-609
               

               
Cow position:
               
chr17:25139544-25139301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
374-682
               

               
Cow position:
               
chr17:35149259-35149561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
374-742
               

               
Cow position:
               
chr17:21489353-21489714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
374-775
               

               
Cow position:
               
chr17:32349332-32348949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
374-812
               

               
Cow position:
               
chr17:13940049-13940480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
375-648
               

               
Cow position:
               
chr17:10023332-10023053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
375-659
               

               
Cow position:
               
chr17:16868010-16868279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
375-694
               

               
Cow position:
               
chr17:33067298-33067605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
376-599
               

               
Cow position:
               
chr17:6787205-6786984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
376-705
               

               
Cow position:
               
chr17:3883473-3883803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
376-814
               

               
Cow position:
               
chr17:40332033-40331605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
378-614
               

               
Cow position:
               
chr17:10508170-10508401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
380-717
               

               
Cow position:
               
chr17:34790801-34791134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
380-725
               

               
Cow position:
               
chr17:17193753-17193418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
381-648
               

               
Cow position:
               
chr17:18810796-18811056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
381-723
               

               
Cow position:
               
chr17:11994758-11995105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 196
               

               
Conread position:
               
382-595
               

               
Cow position:
               
chr17:6761596-6761796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
382-610
               

               
Cow position:
               
chr17:21718737-21718960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
382-618
               

               
Cow position:
               
chr17:20929504-20929270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
382-665
               

               
Cow position:
               
chr17:5012809-5013093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
382-697
               

               
Cow position:
               
chr17:21039817-21039516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
382-722
               

               
Cow position:
               
chr17:36814624-36814287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
382-766
               

               
Cow position:
               
chr17:42419965-42419607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
372, 18
               

               
Conread position:
               
382-805
               

               
Cow position:
               
chr17:9965760-9966184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 251
               

               
Conread position:
               
382-814
               

               
Cow position:
               
chr17:10528472-10528901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
247, 27
               

               
Conread position:
               
382-815
               

               
Cow position:
               
chr17:36791385-36790978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
382-828
               

               
Cow position:
               
chr17:6936422-6936836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
372, 39
               

               
Conread position:
               
382-830
               

               
Cow position:
               
chr17:18146452-18146006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
383-619
               

               
Cow position:
               
chr17:43957922-43957688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
383-715
               

               
Cow position:
               
chr17:24751174-24750851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
383-820
               

               
Cow position:
               
chr17:21738603-21739051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 255
               

               
Conread position:
               
384-641
               

               
Cow position:
               
chr17:30168980-30169230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
384-703
               

               
Cow position:
               
chr17:7590199-7590511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
384-814
               

               
Cow position:
               
chr17:20801073-20800656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
385-576
               

               
Cow position:
               
chr17:32978678-32978862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
385-635
               

               
Cow position:
               
chr17:17035209-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
385-694
               

               
Cow position:
               
chr17:37815926-37816235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
385-705
               

               
Cow position:
               
chr17:9770762-9770455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
385-802
               

               
Cow position:
               
chr17:25118145-25117742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
386-672
               

               
Cow position:
               
chr17:7571364-7571077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr17:30529286-30529703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
387-561
               

               
Cow position:
               
chr17:14668762-14668588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 44
               

               
Conread position:
               
387-624
               

               
Cow position:
               
chr17:12346579-12346818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
387-641
               

               
Cow position:
               
chr17:18766735-18766990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
387-662
               

               
Cow position:
               
chr17:3389091-3388811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
387-691
               

               
Cow position:
               
chr17:23280601-23280899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
387-740
               

               
Cow position:
               
chr17:25342484-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
387-753
               

               
Cow position:
               
chr17:14652527-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
387-772
               

               
Cow position:
               
chr17:7802918-7803293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr17:12946104-12946525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr17:15102632-15103055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
387-828
               

               
Cow position:
               
chr17:12109064-12108630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
388-688
               

               
Cow position:
               
chr17:28982433-28982140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
388-765
               

               
Cow position:
               
chr17:5250304-5250685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
388-820
               

               
Cow position:
               
chr17:5898270-5898692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
389-587
               

               
Cow position:
               
chr17:41009526-41009330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr17:33275507-33275913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
390-602
               

               
Cow position:
               
chr17:15883928-15883716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
390-781
               

               
Cow position:
               
chr17:25815848-25815473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
390-804
               

               
Cow position:
               
chr17:24559546-24559149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
390-814
               

               
Cow position:
               
chr17:20090376-20090781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 262
               

               
Conread position:
               
390-815
               

               
Cow position:
               
chr17:21292787-21293205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
390-820
               

               
Cow position:
               
chr17:12447150-12447566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 13
               

               
Conread position:
               
391-567
               

               
Cow position:
               
chr17:37973806-37973987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
391-602
               

               
Cow position:
               
chr17:41616991-41616780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
391-687
               

               
Cow position:
               
chr17:18818814-18818530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
391-736
               

               
Cow position:
               
chr17:9824919-9824582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
391-764
               

               
Cow position:
               
chr17:21325596-21325221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
391-808
               

               
Cow position:
               
chr17:4786227-4786650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 254
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr17:10458681-10459096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr17:6424006-6423593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr17:11397919-11397499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
392-595
               

               
Cow position:
               
chr17:20359364-20359164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
392-811
               

               
Cow position:
               
chr17:13922733-13922318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
392-820
               

               
Cow position:
               
chr17:11277776-11278199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
393-602
               

               
Cow position:
               
chr17:39964127-39963922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
394-644
               

               
Cow position:
               
chr17:9935554-9935806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
394-814
               

               
Cow position:
               
chr17:21003582-21003991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
399-634
               

               
Cow position:
               
chr17:9509748-9509982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
399-698
               

               
Cow position:
               
chr17:25126588-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
399-813
               

               
Cow position:
               
chr17:11618833-11618421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
400-633
               

               
Cow position:
               
chr17:25587221-25587442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
402-700
               

               
Cow position:
               
chr17:39606663-39606379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
236, 16
               

               
Conread position:
               
403-594
               

               
Cow position:
               
chr17:11920922-11921112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-595
               

               
Cow position:
               
chr17:43323302-43323493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
403-600
               

               
Cow position:
               
chr17:28795740-28795936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
403-607
               

               
Cow position:
               
chr17:25702844-25702639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-634
               

               
Cow position:
               
chr17:26072519-26072748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 75
               

               
Conread position:
               
403-636
               

               
Cow position:
               
chr17:7810506-7810744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-637
               

               
Cow position:
               
chr17:40355501-40355268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-641
               

               
Cow position:
               
chr17:31559811-31559573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-646
               

               
Cow position:
               
chr17:37857449-37857692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
403-667
               

               
Cow position:
               
chr17:5421921-5421657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
403-670
               

               
Cow position:
               
chr17:22189671-22189417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-700
               

               
Cow position:
               
chr17:26513431-26513137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-720
               

               
Cow position:
               
chr17:3153328-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
403-727
               

               
Cow position:
               
chr17:22128162-22127849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
403-767
               

               
Cow position:
               
chr17:11215652-11216008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
403-779
               

               
Cow position:
               
chr17:27183702-27184069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
403-789
               

               
Cow position:
               
chr17:30728747-30728382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
403-793
               

               
Cow position:
               
chr17:26233587-26233969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
403-809
               

               
Cow position:
               
chr17:11280851-11281262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
403-812
               

               
Cow position:
               
chr17:16446186-16446590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
403-812
               

               
Cow position:
               
chr17:31480790-31481203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr17:1256258-1256663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr17:11839963-11839539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr17:12289170-12289574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr17:4105752-4106146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr17:4121487-4121882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr17:12536231-12536628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr17:22032448-22032854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:908979-908579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:8836711-8837116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
248, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:24587863-24587451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:24824486-24824085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:25128113-25128516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:25875635-25875245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr17:32418877-32419285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
404-682
               

               
Cow position:
               
chr17:9950417-9950697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
404-723
               

               
Cow position:
               
chr17:8597870-8598179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
404-788
               

               
Cow position:
               
chr17:32280907-32280531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
404-814
               

               
Cow position:
               
chr17:44146734-44147136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
404-820
               

               
Cow position:
               
chr17:32278665-32279074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
405-567
               

               
Cow position:
               
chr17:6767022-6767181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
405-814
               

               
Cow position:
               
chr17:26231203-26230779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
406-785
               

               
Cow position:
               
chr17:40673610-40673251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
406-813
               

               
Cow position:
               
chr17:18490770-18490374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
413-814
               

               
Cow position:
               
chr17:5900613-5900218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
413-816
               

               
Cow position:
               
chr17:23100990-23101372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
414-811
               

               
Cow position:
               
chr17:5514988-5514598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
414-820
               

               
Cow position:
               
chr17:9697452-9697868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
418-697
               

               
Cow position:
               
chr17:18267487-18267207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
418-775
               

               
Cow position:
               
chr17:20884752-20884398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 221
               

               
Conread position:
               
418-814
               

               
Cow position:
               
chr17:29080764-29080401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
418-820
               

               
Cow position:
               
chr17:1063395-1063022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
398, 51
               

               
Conread position:
               
419-813
               

               
Cow position:
               
chr17:24490767-24490362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 67
               

               
Conread position:
               
419-814
               

               
Cow position:
               
chr17:32989699-32989332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
419-814
               

               
Cow position:
               
chr17:32993401-32993774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
419-820
               

               
Cow position:
               
chr17:25189513-25189112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
421-820
               

               
Cow position:
               
chr17:21434507-21434896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
208, 61
               

               
Conread position:
               
422-602
               

               
Cow position:
               
chr17:5344842-5344662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
118, 127
               

               
Conread position:
               
422-724
               

               
Cow position:
               
chr17:36275559-36275263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
426-716
               

               
Cow position:
               
chr17:40639166-40638883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
426-814
               

               
Cow position:
               
chr17:15187850-15188241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
427-742
               

               
Cow position:
               
chr17:5349908-5350216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
265, 36
               

               
Conread position:
               
428-545
               

               
Cow position:
               
chr17:22772908-22773025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-571
               

               
Cow position:
               
chr17:28529070-28528929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
428-583
               

               
Cow position:
               
chr17:7037406-7037560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
428-583
               

               
Cow position:
               
chr17:26183561-26183408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
428-600
               

               
Cow position:
               
chr17:31754558-31754728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
428-613
               

               
Cow position:
               
chr17:10414707-10414532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
428-619
               

               
Cow position:
               
chr17:6005014-6004831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
428-619
               

               
Cow position:
               
chr17:27292240-27292429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
428-634
               

               
Cow position:
               
chr17:24862669-24862471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
428-634
               

               
Cow position:
               
chr17:32143303-32143102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
169, 59
               

               
Conread position:
               
428-636
               

               
Cow position:
               
chr17:8986387-8986595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
428-638
               

               
Cow position:
               
chr17:21863873-21863665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
428-673
               

               
Cow position:
               
chr17:25584458-25584215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
206, 58
               

               
Conread position:
               
428-700
               

               
Cow position:
               
chr17:22051377-22051643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
428-749
               

               
Cow position:
               
chr17:11912291-11912594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
428-767
               

               
Cow position:
               
chr17:32138202-32138531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
428-768
               

               
Cow position:
               
chr17:33933535-33933861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
428-779
               

               
Cow position:
               
chr17:10431750-10432102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 220
               

               
Conread position:
               
428-780
               

               
Cow position:
               
chr17:17180259-17179902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
428-788
               

               
Cow position:
               
chr17:14025693-14026054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
428-794
               

               
Cow position:
               
chr17:1114112-1113743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 207
               

               
Conread position:
               
428-795
               

               
Cow position:
               
chr17:24928692-24928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
428-802
               

               
Cow position:
               
chr17:17410514-17410145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 307
               

               
Conread position:
               
428-804
               

               
Cow position:
               
chr17:21599466-21599835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
323, 58
               

               
Conread position:
               
428-805
               

               
Cow position:
               
chr17:30713560-30713195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
326, 61
               

               
Conread position:
               
428-805
               

               
Cow position:
               
chr17:31037162-31037531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 65
               

               
Conread position:
               
428-811
               

               
Cow position:
               
chr17:20889578-20889217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
328, 58
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr17:34948851-34948483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr17:7143071-7142704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr17:12929314-12929703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr17:39771616-39771236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
428-816
               

               
Cow position:
               
chr17:6329326-6328947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 41
               

               
Conread position:
               
428-818
               

               
Cow position:
               
chr17:28468338-28467972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:10447127-10446749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:11362390-11362016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:14033427-14033811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 37
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:20992824-20993206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 68
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:21114741-21115115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
388, 41
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:38615177-38614789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr17:40741868-40741480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr17:3202197-3202574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr17:11381511-11381893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr17:26000333-25999943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
429-718
               

               
Cow position:
               
chr17:26448756-26448473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
235, 49
               

               
Conread position:
               
429-725
               

               
Cow position:
               
chr17:29026288-29025992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
429-770
               

               
Cow position:
               
chr17:31856885-31856543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 48
               

               
Conread position:
               
429-802
               

               
Cow position:
               
chr17:1634280-1634633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
203, 34
               

               
Conread position:
               
429-811
               

               
Cow position:
               
chr17:6156246-6155884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
429-812
               

               
Cow position:
               
chr17:20848737-20848372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
429-813
               

               
Cow position:
               
chr17:20092916-20093286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
192, 49
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr17:20780738-20780350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr17:1035381-1035768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 57
               

               
Conread position:
               
429-821
               

               
Cow position:
               
chr17:40772043-40771662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 48
               

               
Conread position:
               
432-576
               

               
Cow position:
               
chr17:3387929-3387788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
432-691
               

               
Cow position:
               
chr17:5372322-5372571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
199, 41
               

               
Conread position:
               
432-766
               

               
Cow position:
               
chr17:37699130-37699472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr17:6566694-6566311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr17:16371468-16371091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr17:20022304-20022677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
313, 46
               

               
Conread position:
               
432-817
               

               
Cow position:
               
chr17:27058339-27058716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 199
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr17:7132214-7132622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr17:11101608-11101961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
384, 37
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr17:24786815-24787188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr17:24883360-24883735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
315, 46
               

               
Conread position:
               
432-823
               

               
Cow position:
               
chr17:21959473-21959851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
433-645
               

               
Cow position:
               
chr17:40276950-40276742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
434-589
               

               
Cow position:
               
chr17:25095694-25095540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
434-690
               

               
Cow position:
               
chr17:37523154-37522902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr17:5288372-5288106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
240, 35
               

               
Conread position:
               
434-739
               

               
Cow position:
               
chr17:1466206-1466521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
434-755
               

               
Cow position:
               
chr17:7693278-7692961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
434-820
               

               
Cow position:
               
chr17:9854190-9853819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 116
               

               
Conread position:
               
434-820
               

               
Cow position:
               
chr17:24149395-24149010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 52
               

               
Conread position:
               
434-828
               

               
Cow position:
               
chr17:2810842-2810448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
436-691
               

               
Cow position:
               
chr17:950182-949933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
440-820
               

               
Cow position:
               
chr17:15684709-15684338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
440-820
               

               
Cow position:
               
chr17:30665474-30665105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 46
               

               
Conread position:
               
444-814
               

               
Cow position:
               
chr17:19891830-19891455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
448-814
               

               
Cow position:
               
chr17:7698248-7697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
448-820
               

               
Cow position:
               
chr17:1492952-1493322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 38
               

               
Conread position:
               
449-820
               

               
Cow position:
               
chr17:22775568-22775216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
451-649
               

               
Cow position:
               
chr17:20834374-20834178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
454-729
               

               
Cow position:
               
chr17:15376785-15376527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
456-610
               

               
Cow position:
               
chr17:10803064-10802918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
457-629
               

               
Cow position:
               
chr17:12342290-12342463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
459-772
               

               
Cow position:
               
chr17:6848981-6848683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
285, 29
               

               
Conread position:
               
459-813
               

               
Cow position:
               
chr17:18592628-18592281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
461-667
               

               
Cow position:
               
chr17:27303785-27303976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
464-762
               

               
Cow position:
               
chr17:11215048-11215341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
464-803
               

               
Cow position:
               
chr17:17060500-17060833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
464-814
               

               
Cow position:
               
chr17:8079495-8079154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 156
               

               
Conread position:
               
468-728
               

               
Cow position:
               
chr17:25718279-25718032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
468-761
               

               
Cow position:
               
chr17:1469554-1469269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
174, 85
               

               
Conread position:
               
468-814
               

               
Cow position:
               
chr17:25796158-25796500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
289, 169
               

               
Conread position:
               
468-819
               

               
Cow position:
               
chr17:21755257-21755607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
264, 45
               

               
Conread position:
               
469-613
               

               
Cow position:
               
chr17:1875866-1876009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
469-618
               

               
Cow position:
               
chr17:9713164-9713313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
469-619
               

               
Cow position:
               
chr17:22074320-22074470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
469-622
               

               
Cow position:
               
chr17:5720049-5719896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
469-634
               

               
Cow position:
               
chr17:21788482-21788646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
469-667
               

               
Cow position:
               
chr17:24163214-24163019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
169, 104
               

               
Conread position:
               
469-684
               

               
Cow position:
               
chr17:28814314-28814534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
469-725
               

               
Cow position:
               
chr17:39715333-39715083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
469-742
               

               
Cow position:
               
chr17:21922455-21922712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
469-747
               

               
Cow position:
               
chr17:27202870-27203139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
469-749
               

               
Cow position:
               
chr17:15340574-15340849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 162
               

               
Conread position:
               
469-767
               

               
Cow position:
               
chr17:7137165-7136865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 183
               

               
Conread position:
               
469-781
               

               
Cow position:
               
chr17:20874573-20874259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
469-812
               

               
Cow position:
               
chr17:9117820-9117485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 32
               

               
Conread position:
               
469-813
               

               
Cow position:
               
chr17:15299702-15300029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr17:1410059-1410410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr17:22564360-22564016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 19
               

               
Conread position:
               
470-635
               

               
Cow position:
               
chr17:25930363-25930527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr17:9746688-9746351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 13
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr17:24554174-24553837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
471-617
               

               
Cow position:
               
chr17:25193349-25193497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
471-766
               

               
Cow position:
               
chr17:24752152-24752429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
471-814
               

               
Cow position:
               
chr17:25917071-25916732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr17:21335519-21335865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
472-725
               

               
Cow position:
               
chr17:22056853-22057098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
472-821
               

               
Cow position:
               
chr17:23246375-23246042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
473-726
               

               
Cow position:
               
chr17:38263315-38263564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
473-771
               

               
Cow position:
               
chr17:33657896-33658187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
473-820
               

               
Cow position:
               
chr17:38833217-38832875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
105, 115
               

               
Conread position:
               
474-614
               

               
Cow position:
               
chr17:3291243-3291105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
474-697
               

               
Cow position:
               
chr17:22016916-22017135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
163, 66
               

               
Conread position:
               
474-814
               

               
Cow position:
               
chr17:8544476-8544146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
474-820
               

               
Cow position:
               
chr17:5422896-5423239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 195
               

               
Conread position:
               
475-810
               

               
Cow position:
               
chr17:924043-923722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
257, 37
               

               
Conread position:
               
476-706
               

               
Cow position:
               
chr17:26730442-26730665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
476-808
               

               
Cow position:
               
chr17:5143992-5144321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
476-820
               

               
Cow position:
               
chr17:20990019-20990361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
478-692
               

               
Cow position:
               
chr17:26789588-26789377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
164, 117
               

               
Conread position:
               
478-747
               

               
Cow position:
               
chr17:23516774-23517037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr17:17059592-17059279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr17:32366462-32366124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
478-820
               

               
Cow position:
               
chr17:25097623-25097295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
478-820
               

               
Cow position:
               
chr17:29157585-29157251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
166, 92
               

               
Conread position:
               
478-820
               

               
Cow position:
               
chr17:40288832-40289171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
271, 21
               

               
Conread position:
               
478-828
               

               
Cow position:
               
chr17:38200594-38200938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 152
               

               
Conread position:
               
479-680
               

               
Cow position:
               
chr17:12959274-12959073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
163, 148
               

               
Conread position:
               
479-725
               

               
Cow position:
               
chr17:2275638-2275399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 154
               

               
Conread position:
               
479-754
               

               
Cow position:
               
chr17:11831947-11832221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 192
               

               
Conread position:
               
479-801
               

               
Cow position:
               
chr17:1060877-1061210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 262
               

               
Conread position:
               
479-814
               

               
Cow position:
               
chr17:4225335-4225651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr17:5768072-5767747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
272, 69
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr17:9911925-9911596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
157, 91
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr17:17406303-17405971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr17:24822029-24821699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
135, 106
               

               
Conread position:
               
480-622
               

               
Cow position:
               
chr17:37430338-37430480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
480-802
               

               
Cow position:
               
chr17:14003992-14003669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 254
               

               
Conread position:
               
480-811
               

               
Cow position:
               
chr17:12219772-12220095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
273, 130
               

               
Conread position:
               
480-814
               

               
Cow position:
               
chr17:27429732-27429418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
158, 90
               

               
Conread position:
               
481-600
               

               
Cow position:
               
chr17:42346853-42346972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
481-687
               

               
Cow position:
               
chr17:29961823-29961616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
481-809
               

               
Cow position:
               
chr17:29472632-29472320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr17:2662589-2662242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr17:24077567-24077235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
481-828
               

               
Cow position:
               
chr17:5255201-5255549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 156
               

               
Conread position:
               
482-781
               

               
Cow position:
               
chr17:39736337-39736049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
482-811
               

               
Cow position:
               
chr17:36330794-36331124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
221, 30
               

               
Conread position:
               
482-821
               

               
Cow position:
               
chr17:27048320-27047992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
483-812
               

               
Cow position:
               
chr17:20234375-20234069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
273, 99
               

               
Conread position:
               
483-814
               

               
Cow position:
               
chr17:3577701-3577378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
483-814
               

               
Cow position:
               
chr17:37481908-37482239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 47
               

               
Conread position:
               
484-667
               

               
Cow position:
               
chr17:34836334-34836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
484-820
               

               
Cow position:
               
chr17:30718255-30718586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
332, 178
               

               
Conread position:
               
485-814
               

               
Cow position:
               
chr17:979007-979313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
485-814
               

               
Cow position:
               
chr17:34596100-34595779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 38
               

               
Conread position:
               
488-786
               

               
Cow position:
               
chr17:39857544-39857261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
488-813
               

               
Cow position:
               
chr17:21243631-21243946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
268, 88
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr17:9565459-9565149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr17:25032323-25032632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
190, 143
               

               
Conread position:
               
488-820
               

               
Cow position:
               
chr17:11296811-11296468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
488-820
               

               
Cow position:
               
chr17:21680938-21680601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
84, 229
               

               
Conread position:
               
489-814
               

               
Cow position:
               
chr17:26765181-26764853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 161
               

               
Conread position:
               
489-820
               

               
Cow position:
               
chr17:21495529-21495207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
489-820
               

               
Cow position:
               
chr17:22806385-22806708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
267, 115
               

               
Conread position:
               
490-820
               

               
Cow position:
               
chr17:24580139-24580467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 6
               

               
Conread position:
               
491-828
               

               
Cow position:
               
chr17:37479846-37480166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
493-749
               

               
Cow position:
               
chr17:3354036-3353784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr17:12591328-12591003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
98, 163
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr17:11156340-11156660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
264, 75
               

               
Conread position:
               
495-814
               

               
Cow position:
               
chr17:7760321-7760623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
502-754
               

               
Cow position:
               
chr17:1040889-1040644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
502-812
               

               
Cow position:
               
chr17:1020417-1020725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr17:265814-265489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr17:11172471-11172782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr17:40421815-40421501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
314, 11
               

               
Conread position:
               
503-755
               

               
Cow position:
               
chr17:25502254-25502007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
137, 71
               

               
Conread position:
               
506-733
               

               
Cow position:
               
chr17:4683490-4683263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
509-762
               

               
Cow position:
               
chr17:23798418-23798170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
247, 8
               

               
Conread position:
               
509-820
               

               
Cow position:
               
chr17:37163393-37163694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
247, 126
               

               
Conread position:
               
509-838
               

               
Cow position:
               
chr17:21628615-21628299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
510-721
               

               
Cow position:
               
chr17:11368712-11368922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
510-814
               

               
Cow position:
               
chr17:41891924-41892228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 220
               

               
Conread position:
               
513-666
               

               
Cow position:
               
chr17:7577731-7577573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
513-820
               

               
Cow position:
               
chr17:11171925-11171628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
514-705
               

               
Cow position:
               
chr17:36094136-36093947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
515-814
               

               
Cow position:
               
chr17:39790829-39790533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
519-812
               

               
Cow position:
               
chr17:14761994-14762277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
229, 114
               

               
Conread position:
               
520-805
               

               
Cow position:
               
chr17:4968239-4967959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
234, 123
               

               
Conread position:
               
520-813
               

               
Cow position:
               
chr17:5006363-5006646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
520-813
               

               
Cow position:
               
chr17:38647188-38646905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
114, 149
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr17:3782170-3781878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
530-775
               

               
Cow position:
               
chr17:28540145-28539904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
532-814
               

               
Cow position:
               
chr17:1275638-1275359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
532-820
               

               
Cow position:
               
chr17:18860608-18860886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 9
               

               
Conread position:
               
533-820
               

               
Cow position:
               
chr17:21917759-21918041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
283, 68
               

               
Conread position:
               
533-820
               

               
Cow position:
               
chr17:26818344-26818620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
221, 77
               

               
Conread position:
               
537-766
               

               
Cow position:
               
chr17:7654344-7654568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
542-780
               

               
Cow position:
               
chr17:14060669-14060906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
542-820
               

               
Cow position:
               
chr17:25541712-25541980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 148
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr17:34316620-34316876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
204, 22
               

               
Conread position:
               
551-820
               

               
Cow position:
               
chr17:14848446-14848690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
205, 34
               

               
Conread position:
               
551-821
               

               
Cow position:
               
chr17:20870002-20870267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
199, 176
               

               
Conread position:
               
552-813
               

               
Cow position:
               
chr17:4601450-4601707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
553-820
               

               
Cow position:
               
chr17:2034623-2034378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
263, 85
               

               
Conread position:
               
556-812
               

               
Cow position:
               
chr17:10020700-10020957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 114
               

               
Conread position:
               
558-814
               

               
Cow position:
               
chr17:40893240-40892989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
562-813
               

               
Cow position:
               
chr17:38362898-38363133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
565-820
               

               
Cow position:
               
chr17:15333628-15333878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
251, 164
               

               
Conread position:
               
567-805
               

               
Cow position:
               
chr17:267505-267735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
164, 71
               

               
Conread position:
               
569-749
               

               
Cow position:
               
chr17:17266813-17266991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
570-819
               

               
Cow position:
               
chr17:1783528-1783774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
570-820
               

               
Cow position:
               
chr17:20839489-20839728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
246, 59
               

               
Conread position:
               
570-820
               

               
Cow position:
               
chr17:41289945-41290185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
179, 68
               

               
Conread position:
               
573-781
               

               
Cow position:
               
chr17:9778317-9778115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
579-768
               

               
Cow position:
               
chr17:1311418-1311230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
175, 74
               

               
Conread position:
               
579-796
               

               
Cow position:
               
chr17:34834145-34834362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr17:3471487-3471261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr17:24550245-24550009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr17:24761160-24761386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
579-817
               

               
Cow position:
               
chr17:21298300-21298061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
579-819
               

               
Cow position:
               
chr17:8690373-8690606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
170, 63
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr17:1081061-1080836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr17:6624324-6624091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
234, 60
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr17:20912956-20912730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr17:26183296-26183055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
66, 181
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr17:44232644-44232886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
172, 148
               

               
Conread position:
               
580-797
               

               
Cow position:
               
chr17:21910854-21911067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
580-814
               

               
Cow position:
               
chr17:1353464-1353236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
580-817
               

               
Cow position:
               
chr17:10491593-10491360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
171, 60
               

               
Conread position:
               
581-814
               

               
Cow position:
               
chr17:27306226-27305998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
582-820
               

               
Cow position:
               
chr17:34207750-34207987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
587-820
               

               
Cow position:
               
chr17:1295511-1295738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
588-821
               

               
Cow position:
               
chr17:10271555-10271323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
589-754
               

               
Cow position:
               
chr17:2839967-2839806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
589-814
               

               
Cow position:
               
chr17:12059034-12059251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr17:13143630-13143857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
165, 136
               

               
Conread position:
               
590-760
               

               
Cow position:
               
chr17:20306107-20305940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
590-780
               

               
Cow position:
               
chr17:11921217-11921412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
590-805
               

               
Cow position:
               
chr17:33122149-33121940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
167, 41
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr17:19999194-19998976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr17:21031844-21031625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 139
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr17:242695-242469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
130, 60
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr17:18884273-18884516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
590-835
               

               
Cow position:
               
chr17:5381937-5382169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
218, 50
               

               
Conread position:
               
592-814
               

               
Cow position:
               
chr17:21620768-21620554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr17:5246948-5246735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr17:10510603-10510822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr17:11056315-11056534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
161, 20
               

               
Conread position:
               
594-828
               

               
Cow position:
               
chr17:26881278-26881510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 132
               

               
Conread position:
               
595-820
               

               
Cow position:
               
chr17:26224563-26224350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
596-828
               

               
Cow position:
               
chr17:42347171-42347394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
597-814
               

               
Cow position:
               
chr17:21312759-21312965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
597-820
               

               
Cow position:
               
chr17:27679187-27679411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
599-820
               

               
Cow position:
               
chr17:35311475-35311254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
601-757
               

               
Cow position:
               
chr17:1505359-1505206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
606-814
               

               
Cow position:
               
chr17:15067584-15067786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
606-820
               

               
Cow position:
               
chr17:5895869-5896078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
609-814
               

               
Cow position:
               
chr17:32651662-32651456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
616-820
               

               
Cow position:
               
chr17:4436200-4436398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
617-820
               

               
Cow position:
               
chr17:11386550-11386347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
619-754
               

               
Cow position:
               
chr17:9936010-9936139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
621-828
               

               
Cow position:
               
chr17:21697765-21697559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 106
               

               
Conread position:
               
623-820
               

               
Cow position:
               
chr17:12216046-12216244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
630-812
               

               
Cow position:
               
chr17:22781710-22781529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
631-814
               

               
Cow position:
               
chr17:31231912-31232090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
632-808
               

               
Cow position:
               
chr17:37857706-37857881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
633-820
               

               
Cow position:
               
chr17:25590218-25590403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
640-814
               

               
Cow position:
               
chr17:10037449-10037283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
641-805
               

               
Cow position:
               
chr17:4824504-4824343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
641-812
               

               
Cow position:
               
chr17:23337008-23337171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
642-820
               

               
Cow position:
               
chr17:20126620-20126446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
174, 78
               

               
Conread position:
               
643-813
               

               
Cow position:
               
chr17:38613253-38613087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
644-814
               

               
Cow position:
               
chr17:21207128-21207295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
644-820
               

               
Cow position:
               
chr17:21017802-21017627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 74
               

               
Conread position:
               
664-812
               

               
Cow position:
               
chr17:20928900-20928752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
664-813
               

               
Cow position:
               
chr17:32554039-32554185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
670-814
               

               
Cow position:
               
chr17:31585412-31585266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
683-820
               

               
Cow position:
               
chr17:40312693-40312554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
687-820
               

               
Cow position:
               
chr17:16117460-16117595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
704-820
               

               
Cow position:
               
chr17:13409403-13409522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.