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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063I05.3
        

               
Conread position:
               
335-636
               

               
Cow position:
               
chr19:34757731-34758043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
352-820
               

               
Cow position:
               
chr19:23304251-23304713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
354-518
               

               
Cow position:
               
chr19:33655119-33654967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
357-619
               

               
Cow position:
               
chr19:8185437-8185179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr19:30007418-30007153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
357-814
               

               
Cow position:
               
chr19:268581-268141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
360-557
               

               
Cow position:
               
chr19:42217085-42217278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
360-583
               

               
Cow position:
               
chr19:54057244-54057025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
360-674
               

               
Cow position:
               
chr19:30227747-30227445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
360-813
               

               
Cow position:
               
chr19:39776921-39777381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
360-820
               

               
Cow position:
               
chr19:43035470-43035023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
362-635
               

               
Cow position:
               
chr19:40324051-40323779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
362-820
               

               
Cow position:
               
chr19:17664879-17664421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
362-823
               

               
Cow position:
               
chr19:28014713-28014255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
363-651
               

               
Cow position:
               
chr19:21176528-21176797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
363-779
               

               
Cow position:
               
chr19:47859086-47859492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
364-564
               

               
Cow position:
               
chr19:41718734-41718933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
365-820
               

               
Cow position:
               
chr19:33912402-33912852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
367-768
               

               
Cow position:
               
chr19:26754262-26753867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
367-811
               

               
Cow position:
               
chr19:25769897-25769452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
368-820
               

               
Cow position:
               
chr19:24145244-24144798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
370-597
               

               
Cow position:
               
chr19:4586324-4586549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
371-798
               

               
Cow position:
               
chr19:1000399-1000809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
371-820
               

               
Cow position:
               
chr19:20661199-20661634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
270, 27
               

               
Conread position:
               
372-567
               

               
Cow position:
               
chr19:29139428-29139230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
372-820
               

               
Cow position:
               
chr19:39361372-39360921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
372-834
               

               
Cow position:
               
chr19:52278244-52278690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
373-598
               

               
Cow position:
               
chr19:12760881-12761106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
373-634
               

               
Cow position:
               
chr19:26167699-26167951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
373-827
               

               
Cow position:
               
chr19:53776351-53776804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
374-676
               

               
Cow position:
               
chr19:28447653-28447361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
374-689
               

               
Cow position:
               
chr19:4297899-4297591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
255, 43
               

               
Conread position:
               
374-744
               

               
Cow position:
               
chr19:55161006-55160647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
374-813
               

               
Cow position:
               
chr19:28451607-28451194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
374-813
               

               
Cow position:
               
chr19:48960613-48960179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr19:6417827-6417380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr19:14348241-14347793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
375-593
               

               
Cow position:
               
chr19:1900513-1900727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
375-654
               

               
Cow position:
               
chr19:39795404-39795128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
376-805
               

               
Cow position:
               
chr19:10081304-10080866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 313
               

               
Conread position:
               
376-820
               

               
Cow position:
               
chr19:17796128-17795676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 238
               

               
Conread position:
               
376-828
               

               
Cow position:
               
chr19:36845457-36845023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 22
               

               
Conread position:
               
378-594
               

               
Cow position:
               
chr19:2137618-2137824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
378-720
               

               
Cow position:
               
chr19:5497208-5496864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
379-567
               

               
Cow position:
               
chr19:4537055-4537236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
379-809
               

               
Cow position:
               
chr19:33033232-33033653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
380-820
               

               
Cow position:
               
chr19:55590445-55590014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 98
               

               
Conread position:
               
381-566
               

               
Cow position:
               
chr19:24068072-24068255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
381-638
               

               
Cow position:
               
chr19:2068471-2068224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
381-759
               

               
Cow position:
               
chr19:41497790-41498165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
381-789
               

               
Cow position:
               
chr19:44055-43658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
381-809
               

               
Cow position:
               
chr19:8864947-8864542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
381-812
               

               
Cow position:
               
chr19:25673309-25673729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
382-629
               

               
Cow position:
               
chr19:37406124-37405883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
382-667
               

               
Cow position:
               
chr19:39758728-39758451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
382-691
               

               
Cow position:
               
chr19:38411075-38410775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
382-814
               

               
Cow position:
               
chr19:15862830-15863250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
382-814
               

               
Cow position:
               
chr19:24137474-24137046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
382-818
               

               
Cow position:
               
chr19:19431424-19431016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
382-821
               

               
Cow position:
               
chr19:12698527-12698103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
383-636
               

               
Cow position:
               
chr19:26269018-26269269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
383-747
               

               
Cow position:
               
chr19:8869782-8869432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
158, 74
               

               
Conread position:
               
383-813
               

               
Cow position:
               
chr19:5185043-5185461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
383-815
               

               
Cow position:
               
chr19:55957361-55957798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
383-820
               

               
Cow position:
               
chr19:2577771-2577357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
383-820
               

               
Cow position:
               
chr19:41024429-41024010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
384-687
               

               
Cow position:
               
chr19:35871003-35870704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
385-543
               

               
Cow position:
               
chr19:21244014-21244163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
385-725
               

               
Cow position:
               
chr19:28924966-28924631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
385-811
               

               
Cow position:
               
chr19:42564353-42563923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr19:1355811-1355394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr19:43413984-43413562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
386-602
               

               
Cow position:
               
chr19:14581566-14581356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr19:30471152-30471556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
387-568
               

               
Cow position:
               
chr19:55742077-55742258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
387-592
               

               
Cow position:
               
chr19:12945100-12945303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
387-599
               

               
Cow position:
               
chr19:42776638-42776429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
387-619
               

               
Cow position:
               
chr19:20378831-20379056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
387-621
               

               
Cow position:
               
chr19:7147852-7148089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
387-629
               

               
Cow position:
               
chr19:25665786-25665556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
387-661
               

               
Cow position:
               
chr19:12645443-12645707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 30
               

               
Conread position:
               
387-732
               

               
Cow position:
               
chr19:53783043-53782694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
387-813
               

               
Cow position:
               
chr19:25382478-25382916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 253
               

               
Conread position:
               
388-633
               

               
Cow position:
               
chr19:41497440-41497682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
388-635
               

               
Cow position:
               
chr19:10930223-10930456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
388-660
               

               
Cow position:
               
chr19:17355061-17354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
388-725
               

               
Cow position:
               
chr19:39664372-39664707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
388-767
               

               
Cow position:
               
chr19:55395111-55394737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
388-814
               

               
Cow position:
               
chr19:39751674-39751269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
389-597
               

               
Cow position:
               
chr19:6020875-6021084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr19:16621153-16621574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr19:55247835-55247407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
390-602
               

               
Cow position:
               
chr19:31763697-31763484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
390-736
               

               
Cow position:
               
chr19:2220873-2221219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
390-814
               

               
Cow position:
               
chr19:5912757-5913162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
390-820
               

               
Cow position:
               
chr19:35847106-35846676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
390-829
               

               
Cow position:
               
chr19:50026084-50025662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
239, 19
               

               
Conread position:
               
391-601
               

               
Cow position:
               
chr19:31729467-31729257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
391-602
               

               
Cow position:
               
chr19:51294085-51294290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
391-635
               

               
Cow position:
               
chr19:34608004-34608237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
391-683
               

               
Cow position:
               
chr19:4459241-4459527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
391-724
               

               
Cow position:
               
chr19:11439313-11438982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
391-776
               

               
Cow position:
               
chr19:9531449-9531055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr19:13316211-13316624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
391-815
               

               
Cow position:
               
chr19:51285836-51285413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 12
               

               
Conread position:
               
392-643
               

               
Cow position:
               
chr19:10734963-10735206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 29
               

               
Conread position:
               
392-780
               

               
Cow position:
               
chr19:51307348-51306959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
396-533
               

               
Cow position:
               
chr19:38637589-38637725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
398-600
               

               
Cow position:
               
chr19:5521965-5522160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
398-819
               

               
Cow position:
               
chr19:41946381-41945972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
399-601
               

               
Cow position:
               
chr19:11211081-11211284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
399-665
               

               
Cow position:
               
chr19:29468885-29468621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
399-803
               

               
Cow position:
               
chr19:54943161-54942774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
400-602
               

               
Cow position:
               
chr19:4339439-4339648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
400-621
               

               
Cow position:
               
chr19:35921042-35920826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
400-694
               

               
Cow position:
               
chr19:16104893-16105179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
228, 78
               

               
Conread position:
               
400-814
               

               
Cow position:
               
chr19:21199341-21198915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
400-814
               

               
Cow position:
               
chr19:51620986-51621395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
403-566
               

               
Cow position:
               
chr19:23416691-23416854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-576
               

               
Cow position:
               
chr19:33691327-33691150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
403-599
               

               
Cow position:
               
chr19:14588593-14588400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
403-602
               

               
Cow position:
               
chr19:51185921-51185724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
403-622
               

               
Cow position:
               
chr19:23831537-23831324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
403-637
               

               
Cow position:
               
chr19:38021632-38021402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
403-650
               

               
Cow position:
               
chr19:23088169-23087930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
403-721
               

               
Cow position:
               
chr19:11110541-11110856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
403-754
               

               
Cow position:
               
chr19:31127163-31127520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-769
               

               
Cow position:
               
chr19:18317180-18316817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
403-788
               

               
Cow position:
               
chr19:12747589-12747966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
403-797
               

               
Cow position:
               
chr19:24759699-24760079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
403-801
               

               
Cow position:
               
chr19:729560-729938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 15
               

               
Conread position:
               
403-809
               

               
Cow position:
               
chr19:432937-433335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
172, 177
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr19:43058726-43058324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 125
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr19:11191433-11191834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr19:13267018-13267395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr19:20622845-20622446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr19:36060142-36059720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-816
               

               
Cow position:
               
chr19:22043168-22043557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr19:7158527-7158952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr19:15438293-15437890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
403-828
               

               
Cow position:
               
chr19:14253823-14253409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
404-727
               

               
Cow position:
               
chr19:25041058-25041368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
404-768
               

               
Cow position:
               
chr19:38111655-38111302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
415-622
               

               
Cow position:
               
chr19:6854108-6854306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
417-819
               

               
Cow position:
               
chr19:55688518-55688920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
418-568
               

               
Cow position:
               
chr19:51637220-51637067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
418-632
               

               
Cow position:
               
chr19:4587553-4587775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
418-646
               

               
Cow position:
               
chr19:17824305-17824527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
418-804
               

               
Cow position:
               
chr19:33903251-33903624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
418-805
               

               
Cow position:
               
chr19:3245880-3246249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
418-814
               

               
Cow position:
               
chr19:17972093-17972471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
418-820
               

               
Cow position:
               
chr19:2589690-2589292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
419-743
               

               
Cow position:
               
chr19:52750585-52750903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
419-755
               

               
Cow position:
               
chr19:18129734-18129405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 146
               

               
Conread position:
               
420-754
               

               
Cow position:
               
chr19:15789875-15789556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
421-698
               

               
Cow position:
               
chr19:18826391-18826662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
208, 65
               

               
Conread position:
               
422-684
               

               
Cow position:
               
chr19:42236213-42235940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 240
               

               
Conread position:
               
424-581
               

               
Cow position:
               
chr19:53472736-53472579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 125
               

               
Conread position:
               
428-567
               

               
Cow position:
               
chr19:42868180-42868043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-596
               

               
Cow position:
               
chr19:18515849-18515684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
428-597
               

               
Cow position:
               
chr19:35444342-35444509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
428-601
               

               
Cow position:
               
chr19:39585942-39586112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 146
               

               
Conread position:
               
428-602
               

               
Cow position:
               
chr19:15076029-15076207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
428-619
               

               
Cow position:
               
chr19:35246107-35245918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
428-629
               

               
Cow position:
               
chr19:21836074-21836272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-638
               

               
Cow position:
               
chr19:2965713-2965499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
428-662
               

               
Cow position:
               
chr19:33637170-33636950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-662
               

               
Cow position:
               
chr19:39613010-39613235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
209, 41
               

               
Conread position:
               
428-665
               

               
Cow position:
               
chr19:6344244-6344001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
428-666
               

               
Cow position:
               
chr19:4987604-4987835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
193, 41
               

               
Conread position:
               
428-667
               

               
Cow position:
               
chr19:6576108-6575878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
428-667
               

               
Cow position:
               
chr19:33913692-33913454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
428-679
               

               
Cow position:
               
chr19:37466899-37467141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
428-715
               

               
Cow position:
               
chr19:24453346-24453627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-715
               

               
Cow position:
               
chr19:43190091-43189810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
113, 152
               

               
Conread position:
               
428-718
               

               
Cow position:
               
chr19:25570754-25570484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
428-742
               

               
Cow position:
               
chr19:36222095-36221785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
159, 81
               

               
Conread position:
               
428-743
               

               
Cow position:
               
chr19:23085020-23084713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
202, 49
               

               
Conread position:
               
428-749
               

               
Cow position:
               
chr19:52185595-52185918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
35, 273
               

               
Conread position:
               
428-752
               

               
Cow position:
               
chr19:53899977-53900299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
428-754
               

               
Cow position:
               
chr19:11724357-11724671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
209, 50
               

               
Conread position:
               
428-754
               

               
Cow position:
               
chr19:23371313-23370992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
203, 70
               

               
Conread position:
               
428-762
               

               
Cow position:
               
chr19:21817128-21816798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 58
               

               
Conread position:
               
428-798
               

               
Cow position:
               
chr19:12709640-12710014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr19:36097386-36097011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr19:38842395-38842765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
428-813
               

               
Cow position:
               
chr19:6609823-6610212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
428-813
               

               
Cow position:
               
chr19:39661376-39661755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr19:6687835-6688217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr19:7637073-7637448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 50
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr19:12601964-12601600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
300, 49
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr19:29368557-29368187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 41
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr19:41585134-41584763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
325, 73
               

               
Conread position:
               
428-819
               

               
Cow position:
               
chr19:34166530-34166147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 16
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:742012-742396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
241, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:10545543-10545927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:11171053-11171438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:23005197-23005584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
194, 47
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:25053498-25053892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:31378445-31378828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:32754691-32754295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:39057410-39057026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:39103851-39104230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr19:51751004-51751390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
201, 41
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr19:15887154-15887548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
429-609
               

               
Cow position:
               
chr19:36777200-36777021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
429-636
               

               
Cow position:
               
chr19:11194603-11194803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
429-694
               

               
Cow position:
               
chr19:39584109-39583844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
429-740
               

               
Cow position:
               
chr19:13121125-13121414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
206, 40
               

               
Conread position:
               
429-784
               

               
Cow position:
               
chr19:56149902-56150256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr19:16096392-16096764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr19:35073277-35073652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr19:46455002-46454638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
324, 40
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr19:8128469-8128097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr19:39246066-39245681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
432-601
               

               
Cow position:
               
chr19:52356410-52356246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
432-667
               

               
Cow position:
               
chr19:43373206-43372974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
46, 203
               

               
Conread position:
               
432-705
               

               
Cow position:
               
chr19:31652719-31652453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-716
               

               
Cow position:
               
chr19:10929604-10929322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
432-757
               

               
Cow position:
               
chr19:47453589-47453279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-760
               

               
Cow position:
               
chr19:26975913-26976221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
432-765
               

               
Cow position:
               
chr19:22449759-22450104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
432-783
               

               
Cow position:
               
chr19:53418800-53418443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
204, 54
               

               
Conread position:
               
432-807
               

               
Cow position:
               
chr19:25854721-25855109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
197, 54
               

               
Conread position:
               
432-812
               

               
Cow position:
               
chr19:32505950-32506320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr19:29626058-29625692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 37
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr19:10213826-10213452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr19:38392966-38392579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 61
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr19:43431164-43431540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 154
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr19:53371736-53372115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
433-814
               

               
Cow position:
               
chr19:32457801-32457430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
434-810
               

               
Cow position:
               
chr19:3621585-3621221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
434-812
               

               
Cow position:
               
chr19:53542732-53543090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
434-820
               

               
Cow position:
               
chr19:5433422-5433780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
269, 35
               

               
Conread position:
               
437-811
               

               
Cow position:
               
chr19:12155011-12154639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
440-688
               

               
Cow position:
               
chr19:43525057-43525306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
440-705
               

               
Cow position:
               
chr19:47987007-47986748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
440-742
               

               
Cow position:
               
chr19:7741453-7741747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
440-748
               

               
Cow position:
               
chr19:39254290-39254602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
184, 291
               

               
Conread position:
               
448-761
               

               
Cow position:
               
chr19:39384898-39385200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
276, 21
               

               
Conread position:
               
448-810
               

               
Cow position:
               
chr19:40051245-40051594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
448-814
               

               
Cow position:
               
chr19:18786167-18786536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
448-820
               

               
Cow position:
               
chr19:23786318-23785970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
450-594
               

               
Cow position:
               
chr19:52568329-52568474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
450-749
               

               
Cow position:
               
chr19:48021500-48021782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
451-690
               

               
Cow position:
               
chr19:41695522-41695758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
451-714
               

               
Cow position:
               
chr19:34819046-34819306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
451-730
               

               
Cow position:
               
chr19:25397841-25397560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
451-762
               

               
Cow position:
               
chr19:25646037-25645732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
451-814
               

               
Cow position:
               
chr19:8793532-8793889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
451-820
               

               
Cow position:
               
chr19:23403502-23403863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 35
               

               
Conread position:
               
452-667
               

               
Cow position:
               
chr19:12497346-12497560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
203, 25
               

               
Conread position:
               
452-828
               

               
Cow position:
               
chr19:48723164-48722800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
456-820
               

               
Cow position:
               
chr19:31846411-31846761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
458-820
               

               
Cow position:
               
chr19:4445484-4445839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
459-825
               

               
Cow position:
               
chr19:43292190-43291825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 175
               

               
Conread position:
               
461-755
               

               
Cow position:
               
chr19:8599181-8599473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
462-814
               

               
Cow position:
               
chr19:35742297-35741946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
462-820
               

               
Cow position:
               
chr19:30886526-30886174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 17
               

               
Conread position:
               
463-813
               

               
Cow position:
               
chr19:2207661-2207987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
464-805
               

               
Cow position:
               
chr19:53840647-53840313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 108
               

               
Conread position:
               
465-754
               

               
Cow position:
               
chr19:33237307-33237022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 162
               

               
Conread position:
               
465-814
               

               
Cow position:
               
chr19:22039902-22039559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
465-820
               

               
Cow position:
               
chr19:23222760-23222416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
348, 105
               

               
Conread position:
               
467-820
               

               
Cow position:
               
chr19:7473827-7473480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 201
               

               
Conread position:
               
468-679
               

               
Cow position:
               
chr19:2223978-2224182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
468-749
               

               
Cow position:
               
chr19:4800866-4800594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
468-809
               

               
Cow position:
               
chr19:6079240-6079566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
468-814
               

               
Cow position:
               
chr19:6532010-6531679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
468-817
               

               
Cow position:
               
chr19:11424190-11424524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 88
               

               
Conread position:
               
469-672
               

               
Cow position:
               
chr19:54915566-54915767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
469-742
               

               
Cow position:
               
chr19:31691159-31690892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
469-754
               

               
Cow position:
               
chr19:43202864-43203143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
469-759
               

               
Cow position:
               
chr19:7404253-7404538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
469-760
               

               
Cow position:
               
chr19:46094510-46094799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
165, 258
               

               
Conread position:
               
469-796
               

               
Cow position:
               
chr19:50682321-50682633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
469-805
               

               
Cow position:
               
chr19:22134025-22134348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
469-813
               

               
Cow position:
               
chr19:8033871-8033529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr19:53243353-53243685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr19:25851356-25851707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 157
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr19:25864792-25865143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 157
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr19:47118364-47118718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
469-828
               

               
Cow position:
               
chr19:51185550-51185202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr19:21335470-21335835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 189
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr19:33469146-33468805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 185
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr19:34001333-34000991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
470-825
               

               
Cow position:
               
chr19:8270475-8270829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
160, 139
               

               
Conread position:
               
471-629
               

               
Cow position:
               
chr19:7675357-7675200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
471-723
               

               
Cow position:
               
chr19:52196831-52196582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
471-725
               

               
Cow position:
               
chr19:52215285-52215036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
471-813
               

               
Cow position:
               
chr19:21065892-21065565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
471-814
               

               
Cow position:
               
chr19:16693908-16694260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
471-814
               

               
Cow position:
               
chr19:26087319-26086983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr19:26706090-26706424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
473-814
               

               
Cow position:
               
chr19:13442325-13441984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
474-679
               

               
Cow position:
               
chr19:39781641-39781435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
474-698
               

               
Cow position:
               
chr19:39648955-39649176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
474-810
               

               
Cow position:
               
chr19:22798959-22799291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
475-636
               

               
Cow position:
               
chr19:30241818-30241658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
475-690
               

               
Cow position:
               
chr19:3870729-3870511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
475-780
               

               
Cow position:
               
chr19:25526404-25526103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 223
               

               
Conread position:
               
475-800
               

               
Cow position:
               
chr19:3217133-3216823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
476-818
               

               
Cow position:
               
chr19:10242696-10242368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
273, 35
               

               
Conread position:
               
477-636
               

               
Cow position:
               
chr19:23756624-23756783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-768
               

               
Cow position:
               
chr19:38500282-38499998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
164, 95
               

               
Conread position:
               
477-814
               

               
Cow position:
               
chr19:27612051-27612380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
478-614
               

               
Cow position:
               
chr19:31998156-31998292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
478-754
               

               
Cow position:
               
chr19:25807190-25807456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
478-813
               

               
Cow position:
               
chr19:53791313-53791641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
271, 165
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr19:25652642-25652974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
479-745
               

               
Cow position:
               
chr19:15092020-15092272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
154, 94
               

               
Conread position:
               
479-762
               

               
Cow position:
               
chr19:1650625-1650339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
246, 173
               

               
Conread position:
               
479-788
               

               
Cow position:
               
chr19:6849077-6849390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 166
               

               
Conread position:
               
479-817
               

               
Cow position:
               
chr19:11534782-11534472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr19:1968200-1968523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
277, 67
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr19:22765737-22765398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 69
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr19:42695110-42694769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
480-813
               

               
Cow position:
               
chr19:11376296-11376616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
162, 16
               

               
Conread position:
               
480-818
               

               
Cow position:
               
chr19:19919347-19919678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-809
               

               
Cow position:
               
chr19:12711761-12712087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
481-813
               

               
Cow position:
               
chr19:14593171-14592839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 240
               

               
Conread position:
               
481-814
               

               
Cow position:
               
chr19:37188140-37187820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr19:9541787-9542116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
273, 15
               

               
Conread position:
               
482-765
               

               
Cow position:
               
chr19:35107639-35107362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
160, 46
               

               
Conread position:
               
482-811
               

               
Cow position:
               
chr19:34619916-34620237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
483-742
               

               
Cow position:
               
chr19:29115855-29115602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
163, 89
               

               
Conread position:
               
483-820
               

               
Cow position:
               
chr19:35762138-35762475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
484-814
               

               
Cow position:
               
chr19:47671855-47671539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
485-727
               

               
Cow position:
               
chr19:42887059-42886829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 62
               

               
Conread position:
               
485-814
               

               
Cow position:
               
chr19:10964491-10964812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
486-748
               

               
Cow position:
               
chr19:50237358-50237616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
241, 61
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr19:25410740-25410918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
488-772
               

               
Cow position:
               
chr19:11443098-11442807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
488-775
               

               
Cow position:
               
chr19:7884685-7884406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
260, 75
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr19:3811912-3812227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
489-662
               

               
Cow position:
               
chr19:43647523-43647348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 154
               

               
Conread position:
               
489-749
               

               
Cow position:
               
chr19:10970989-10971260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
489-781
               

               
Cow position:
               
chr19:24062383-24062109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
265, 138
               

               
Conread position:
               
490-814
               

               
Cow position:
               
chr19:36245389-36245698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
492-820
               

               
Cow position:
               
chr19:30534032-30533722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr19:22153747-22154073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
493-814
               

               
Cow position:
               
chr19:33290586-33290270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 140
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr19:39576466-39576789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
261, 233
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr19:43418508-43418199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
493-828
               

               
Cow position:
               
chr19:4503322-4502995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 79
               

               
Conread position:
               
494-820
               

               
Cow position:
               
chr19:36125687-36125365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 5
               

               
Conread position:
               
496-748
               

               
Cow position:
               
chr19:30552116-30551880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
496-820
               

               
Cow position:
               
chr19:20670807-20671120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
217, 135
               

               
Conread position:
               
502-813
               

               
Cow position:
               
chr19:20687129-20686833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
235, 10
               

               
Conread position:
               
502-813
               

               
Cow position:
               
chr19:21363344-21363654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
143, 183
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr19:8332393-8332075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr19:20310546-20310849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
244, 71
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr19:52456667-52456980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
503-820
               

               
Cow position:
               
chr19:17273648-17273939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
241, 67
               

               
Conread position:
               
503-828
               

               
Cow position:
               
chr19:31595393-31595074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 130
               

               
Conread position:
               
509-754
               

               
Cow position:
               
chr19:9408773-9408530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
510-814
               

               
Cow position:
               
chr19:3496088-3496386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
513-820
               

               
Cow position:
               
chr19:19662125-19661823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
513-820
               

               
Cow position:
               
chr19:42206005-42205715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
303, 17
               

               
Conread position:
               
514-828
               

               
Cow position:
               
chr19:38637743-38638026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
284, 10
               

               
Conread position:
               
516-820
               

               
Cow position:
               
chr19:18749996-18750299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
240, 113
               

               
Conread position:
               
520-769
               

               
Cow position:
               
chr19:31536202-31535958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
520-811
               

               
Cow position:
               
chr19:4328978-4329256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 50
               

               
Conread position:
               
520-813
               

               
Cow position:
               
chr19:43441243-43440952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
520-828
               

               
Cow position:
               
chr19:51400939-51401233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
525-784
               

               
Cow position:
               
chr19:10173046-10173303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
525-813
               

               
Cow position:
               
chr19:25999688-25999421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
530-781
               

               
Cow position:
               
chr19:7543479-7543231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 204
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr19:2734515-2734240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
258, 107
               

               
Conread position:
               
530-820
               

               
Cow position:
               
chr19:42240230-42240510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
531-788
               

               
Cow position:
               
chr19:41517824-41518097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 247
               

               
Conread position:
               
533-814
               

               
Cow position:
               
chr19:31824951-31825227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
247, 39
               

               
Conread position:
               
542-812
               

               
Cow position:
               
chr19:29070666-29070917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
219, 97
               

               
Conread position:
               
550-814
               

               
Cow position:
               
chr19:31874166-31873905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
550-816
               

               
Cow position:
               
chr19:33823364-33823103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
551-812
               

               
Cow position:
               
chr19:37646792-37647049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
557-804
               

               
Cow position:
               
chr19:33116635-33116391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
560-725
               

               
Cow position:
               
chr19:12094046-12093875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
566-814
               

               
Cow position:
               
chr19:32451115-32450866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 152
               

               
Conread position:
               
569-814
               

               
Cow position:
               
chr19:14928630-14928882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
569-828
               

               
Cow position:
               
chr19:44125675-44125423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 190
               

               
Conread position:
               
575-820
               

               
Cow position:
               
chr19:25851812-25852051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
239, 45
               

               
Conread position:
               
576-819
               

               
Cow position:
               
chr19:10172024-10171784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
576-820
               

               
Cow position:
               
chr19:1580568-1580802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
579-794
               

               
Cow position:
               
chr19:52675087-52675300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr19:3222821-3222588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 85
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr19:47187039-47187264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr19:6949921-6949696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr19:46918866-46918622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
580-824
               

               
Cow position:
               
chr19:8839622-8839379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
581-811
               

               
Cow position:
               
chr19:35622372-35622156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
581-813
               

               
Cow position:
               
chr19:14992910-14993134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
581-820
               

               
Cow position:
               
chr19:8211822-8212056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
235, 21
               

               
Conread position:
               
582-814
               

               
Cow position:
               
chr19:37423262-37423488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
583-820
               

               
Cow position:
               
chr19:41187816-41187580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
207, 8
               

               
Conread position:
               
587-805
               

               
Cow position:
               
chr19:20693508-20693294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
589-781
               

               
Cow position:
               
chr19:21092775-21092591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr19:36176755-36176526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr19:47727567-47727790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
590-749
               

               
Cow position:
               
chr19:19174157-19173995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
590-775
               

               
Cow position:
               
chr19:39587520-39587702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
590-805
               

               
Cow position:
               
chr19:33932143-33932344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
590-810
               

               
Cow position:
               
chr19:55724694-55724907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr19:10286901-10286689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
590-828
               

               
Cow position:
               
chr19:38596623-38596390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
590-828
               

               
Cow position:
               
chr19:51334686-51334443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 231
               

               
Conread position:
               
591-823
               

               
Cow position:
               
chr19:419895-419652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
592-814
               

               
Cow position:
               
chr19:13390917-13390708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr19:53645423-53645627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr19:54182740-54182962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
163, 49
               

               
Conread position:
               
595-828
               

               
Cow position:
               
chr19:33307101-33306871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
596-814
               

               
Cow position:
               
chr19:1898238-1898446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
596-820
               

               
Cow position:
               
chr19:10786369-10786578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
596-828
               

               
Cow position:
               
chr19:2349254-2349482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
597-808
               

               
Cow position:
               
chr19:6092765-6092559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
597-814
               

               
Cow position:
               
chr19:42746339-42746544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
600-820
               

               
Cow position:
               
chr19:2138109-2138324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
216, 38
               

               
Conread position:
               
605-814
               

               
Cow position:
               
chr19:31763017-31762812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
151, 34
               

               
Conread position:
               
608-814
               

               
Cow position:
               
chr19:32955874-32955672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 22
               

               
Conread position:
               
621-814
               

               
Cow position:
               
chr19:3489476-3489285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
621-820
               

               
Cow position:
               
chr19:46180842-46181033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
639-814
               

               
Cow position:
               
chr19:48409469-48409303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
642-777
               

               
Cow position:
               
chr19:42069991-42070122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
643-810
               

               
Cow position:
               
chr19:2735015-2735176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
643-820
               

               
Cow position:
               
chr19:10093248-10093077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 84
               

               
Conread position:
               
650-820
               

               
Cow position:
               
chr19:30925374-30925537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
166, 67
               

               
Conread position:
               
650-820
               

               
Cow position:
               
chr19:34911834-34911665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
669-820
               

               
Cow position:
               
chr19:24956516-24956661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
676-818
               

               
Cow position:
               
chr19:19499632-19499772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
678-820
               

               
Cow position:
               
chr19:20432856-20432997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
679-820
               

               
Cow position:
               
chr19:27104666-27104527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 49
               
Show alignments to all cow chromosomes.