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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063I05.3
        

               
Conread position:
               
336-820
               

               
Cow position:
               
chr20:39417595-39418059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
349-820
               

               
Cow position:
               
chr20:18551657-18551198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
355-813
               

               
Cow position:
               
chr20:13876418-13876865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
357-798
               

               
Cow position:
               
chr20:14433126-14433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
358-814
               

               
Cow position:
               
chr20:36779432-36779889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 197
               

               
Conread position:
               
359-838
               

               
Cow position:
               
chr20:19328680-19328218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
360-814
               

               
Cow position:
               
chr20:34202925-34202489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
361-602
               

               
Cow position:
               
chr20:28935360-28935591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
361-637
               

               
Cow position:
               
chr20:30744433-30744709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
362-622
               

               
Cow position:
               
chr20:10245783-10246026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
362-636
               

               
Cow position:
               
chr20:37919088-37919357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
364-600
               

               
Cow position:
               
chr20:9033934-9034167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
364-660
               

               
Cow position:
               
chr20:1824354-1824641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
364-802
               

               
Cow position:
               
chr20:29990167-29990587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
365-654
               

               
Cow position:
               
chr20:14283211-14282910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
366-622
               

               
Cow position:
               
chr20:14490520-14490277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
366-745
               

               
Cow position:
               
chr20:12205466-12205822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
270, 24
               

               
Conread position:
               
366-814
               

               
Cow position:
               
chr20:3141848-3141425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
366-821
               

               
Cow position:
               
chr20:31739935-31740384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
368-820
               

               
Cow position:
               
chr20:34097674-34098123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
369-800
               

               
Cow position:
               
chr20:17470986-17470585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
385, 49
               

               
Conread position:
               
370-553
               

               
Cow position:
               
chr20:17524551-17524368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
371-629
               

               
Cow position:
               
chr20:25021708-25021448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
372-647
               

               
Cow position:
               
chr20:4998834-4999111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
372-828
               

               
Cow position:
               
chr20:35146289-35145838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
373-648
               

               
Cow position:
               
chr20:36239522-36239248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
373-725
               

               
Cow position:
               
chr20:11548457-11548796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
374-614
               

               
Cow position:
               
chr20:37609895-37609657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
374-641
               

               
Cow position:
               
chr20:14898015-14897745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
374-768
               

               
Cow position:
               
chr20:24070071-24069688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
380, 11
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr20:8556000-8556439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr20:35742038-35741588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
375-563
               

               
Cow position:
               
chr20:21344743-21344553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
375-662
               

               
Cow position:
               
chr20:25953536-25953256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
376-560
               

               
Cow position:
               
chr20:17733290-17733470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
376-592
               

               
Cow position:
               
chr20:25464777-25464988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
376-602
               

               
Cow position:
               
chr20:3035606-3035380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
376-828
               

               
Cow position:
               
chr20:13829529-13829093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
378-749
               

               
Cow position:
               
chr20:24712108-24711740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 9
               

               
Conread position:
               
380-604
               

               
Cow position:
               
chr20:19201799-19201576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
380-819
               

               
Cow position:
               
chr20:35176505-35176933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
382-566
               

               
Cow position:
               
chr20:40442200-40442384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
382-692
               

               
Cow position:
               
chr20:11359377-11359670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
209, 5
               

               
Conread position:
               
382-697
               

               
Cow position:
               
chr20:38515055-38514736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
382-820
               

               
Cow position:
               
chr20:22235563-22235150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
383-600
               

               
Cow position:
               
chr20:11920470-11920681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
383-645
               

               
Cow position:
               
chr20:35444839-35445099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
383-698
               

               
Cow position:
               
chr20:23549018-23548699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
383-803
               

               
Cow position:
               
chr20:41089529-41089941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
384-602
               

               
Cow position:
               
chr20:24883098-24883320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 105
               

               
Conread position:
               
385-635
               

               
Cow position:
               
chr20:15530120-15529875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
385-697
               

               
Cow position:
               
chr20:39016609-39016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
385-725
               

               
Cow position:
               
chr20:11135491-11135830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr20:34251407-34251843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
386-544
               

               
Cow position:
               
chr20:10469304-10469147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
386-767
               

               
Cow position:
               
chr20:31289761-31289383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
257, 17
               

               
Conread position:
               
386-781
               

               
Cow position:
               
chr20:6054251-6054647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
386-813
               

               
Cow position:
               
chr20:26996795-26996373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr20:23846407-23846837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
387-559
               

               
Cow position:
               
chr20:18500790-18500617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
387-687
               

               
Cow position:
               
chr20:34083976-34083684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
387-811
               

               
Cow position:
               
chr20:34221741-34221319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
387-812
               

               
Cow position:
               
chr20:7658966-7659371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr20:6238372-6238805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
387-820
               

               
Cow position:
               
chr20:5950378-5950798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
388-649
               

               
Cow position:
               
chr20:11002661-11002397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
388-818
               

               
Cow position:
               
chr20:4755577-4755987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
388-820
               

               
Cow position:
               
chr20:1139509-1139938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 98
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr20:42309713-42310125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
390-567
               

               
Cow position:
               
chr20:297747-297926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
390-809
               

               
Cow position:
               
chr20:12239435-12239833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
221, 35
               

               
Conread position:
               
390-814
               

               
Cow position:
               
chr20:4944994-4945403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
391-556
               

               
Cow position:
               
chr20:5268585-5268750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
391-812
               

               
Cow position:
               
chr20:39325647-39325229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr20:5814823-5814412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr20:13995072-13994644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
392-614
               

               
Cow position:
               
chr20:21291922-21291695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
392-633
               

               
Cow position:
               
chr20:36806770-36806537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
392-820
               

               
Cow position:
               
chr20:10209062-10208637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
393-606
               

               
Cow position:
               
chr20:33076565-33076780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
393-820
               

               
Cow position:
               
chr20:3599150-3599555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
399-583
               

               
Cow position:
               
chr20:27323515-27323332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
399-595
               

               
Cow position:
               
chr20:2798749-2798936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
399-798
               

               
Cow position:
               
chr20:39518258-39517861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
400-691
               

               
Cow position:
               
chr20:20124786-20125070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
400-742
               

               
Cow position:
               
chr20:18622820-18622493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
400-814
               

               
Cow position:
               
chr20:3320883-3321296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 187
               

               
Conread position:
               
402-692
               

               
Cow position:
               
chr20:21428401-21428119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
402-734
               

               
Cow position:
               
chr20:16548027-16548361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 240
               

               
Conread position:
               
403-622
               

               
Cow position:
               
chr20:7416918-7417140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 181
               

               
Conread position:
               
403-622
               

               
Cow position:
               
chr20:8679418-8679640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
403-653
               

               
Cow position:
               
chr20:5365170-5364926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
403-668
               

               
Cow position:
               
chr20:29085601-29085344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
403-721
               

               
Cow position:
               
chr20:6248357-6248665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
403-755
               

               
Cow position:
               
chr20:28594534-28594182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
403-812
               

               
Cow position:
               
chr20:28296540-28296134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr20:14980265-14980673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr20:7441900-7442288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
413, 9
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr20:11340561-11340970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr20:13023260-13023643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
403-828
               

               
Cow position:
               
chr20:15548650-15549068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
404-635
               

               
Cow position:
               
chr20:5703713-5703485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
404-814
               

               
Cow position:
               
chr20:10884110-10884524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
150, 83
               

               
Conread position:
               
406-669
               

               
Cow position:
               
chr20:16291932-16291676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
412-820
               

               
Cow position:
               
chr20:7425963-7426354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
414-642
               

               
Cow position:
               
chr20:206410-206640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
418-672
               

               
Cow position:
               
chr20:12126072-12126325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
422-820
               

               
Cow position:
               
chr20:10177850-10178275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
427-820
               

               
Cow position:
               
chr20:27407677-27408043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
149, 42
               

               
Conread position:
               
428-583
               

               
Cow position:
               
chr20:20459808-20459658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
428-602
               

               
Cow position:
               
chr20:35442065-35442235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
428-637
               

               
Cow position:
               
chr20:18192879-18193081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
428-667
               

               
Cow position:
               
chr20:36211933-36212166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
428-682
               

               
Cow position:
               
chr20:16097060-16096810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
428-694
               

               
Cow position:
               
chr20:1293812-1294073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
428-694
               

               
Cow position:
               
chr20:20898373-20898633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
428-694
               

               
Cow position:
               
chr20:34849577-34849844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
428-716
               

               
Cow position:
               
chr20:354682-354961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
428-721
               

               
Cow position:
               
chr20:16941066-16941361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
428-725
               

               
Cow position:
               
chr20:7738018-7738300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
428-754
               

               
Cow position:
               
chr20:33067143-33067473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
428-780
               

               
Cow position:
               
chr20:32523679-32523337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
193, 52
               

               
Conread position:
               
428-781
               

               
Cow position:
               
chr20:9433798-9433459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
428-784
               

               
Cow position:
               
chr20:20984213-20983870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
428-785
               

               
Cow position:
               
chr20:38847011-38847368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
428-786
               

               
Cow position:
               
chr20:4892604-4892956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr20:6240304-6240685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
323, 41
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr20:7806350-7806720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
328, 58
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr20:11045890-11045520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
220, 65
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr20:22959129-22959500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 49
               

               
Conread position:
               
428-819
               

               
Cow position:
               
chr20:29845271-29844892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
428-819
               

               
Cow position:
               
chr20:33434943-33435330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:8578467-8578079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:10913126-10913500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
328, 36
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:14880002-14879622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:21345655-21345241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:30817737-30817372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
220, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:38486341-38486713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
388, 59
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr20:41704378-41703989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr20:7550450-7550070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 131
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr20:12581740-12582118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
428-839
               

               
Cow position:
               
chr20:10200565-10200163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
429-629
               

               
Cow position:
               
chr20:38925634-38925831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr20:12995778-12996166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr20:14807098-14806728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr20:40422883-40423248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
431-711
               

               
Cow position:
               
chr20:16818634-16818356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
238, 55
               

               
Conread position:
               
432-613
               

               
Cow position:
               
chr20:23935966-23936148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
432-622
               

               
Cow position:
               
chr20:39268870-39269058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
432-637
               

               
Cow position:
               
chr20:2742922-2743125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
432-718
               

               
Cow position:
               
chr20:11008385-11008104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-725
               

               
Cow position:
               
chr20:32709229-32709523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
432-743
               

               
Cow position:
               
chr20:36741676-36741387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
432-755
               

               
Cow position:
               
chr20:11611893-11611580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-798
               

               
Cow position:
               
chr20:9266888-9267243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
432-804
               

               
Cow position:
               
chr20:5024754-5025091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
432-809
               

               
Cow position:
               
chr20:12420407-12420774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 45
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr20:31927248-31927616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
325, 54
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr20:17251931-17251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 46
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr20:40177456-40177085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
384, 46
               

               
Conread position:
               
434-747
               

               
Cow position:
               
chr20:5078846-5078529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
434-829
               

               
Cow position:
               
chr20:38872789-38873184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 56
               

               
Conread position:
               
437-640
               

               
Cow position:
               
chr20:16405829-16405621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
437-762
               

               
Cow position:
               
chr20:10188482-10188165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
312, 41
               

               
Conread position:
               
437-790
               

               
Cow position:
               
chr20:8098496-8098147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
195, 40
               

               
Conread position:
               
440-637
               

               
Cow position:
               
chr20:23590542-23590735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
440-671
               

               
Cow position:
               
chr20:6372351-6372580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
440-804
               

               
Cow position:
               
chr20:30710430-30710798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
184, 38
               

               
Conread position:
               
440-814
               

               
Cow position:
               
chr20:13652166-13652515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
448-772
               

               
Cow position:
               
chr20:32463329-32463641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
301, 21
               

               
Conread position:
               
448-814
               

               
Cow position:
               
chr20:8429939-8429583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
448-820
               

               
Cow position:
               
chr20:5998461-5998829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 194
               

               
Conread position:
               
451-745
               

               
Cow position:
               
chr20:15118471-15118185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
451-792
               

               
Cow position:
               
chr20:22485055-22484724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
451-813
               

               
Cow position:
               
chr20:41028685-41028326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
221, 26
               

               
Conread position:
               
451-814
               

               
Cow position:
               
chr20:13269807-13269465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
305, 37
               

               
Conread position:
               
451-820
               

               
Cow position:
               
chr20:9014151-9014513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 25
               

               
Conread position:
               
451-821
               

               
Cow position:
               
chr20:271227-271588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
249, 25
               

               
Conread position:
               
452-767
               

               
Cow position:
               
chr20:20099403-20099708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
452-812
               

               
Cow position:
               
chr20:21019757-21019409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
184, 56
               

               
Conread position:
               
452-813
               

               
Cow position:
               
chr20:40782159-40781812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 186
               

               
Conread position:
               
456-606
               

               
Cow position:
               
chr20:2148001-2148149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
456-721
               

               
Cow position:
               
chr20:23506279-23506539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
456-813
               

               
Cow position:
               
chr20:11741116-11741461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 5
               

               
Conread position:
               
458-820
               

               
Cow position:
               
chr20:35906859-35907212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
459-814
               

               
Cow position:
               
chr20:29805465-29805820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
459-820
               

               
Cow position:
               
chr20:38551554-38551209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
459-828
               

               
Cow position:
               
chr20:35365230-35364880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
175, 29
               

               
Conread position:
               
461-721
               

               
Cow position:
               
chr20:14564237-14563984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
462-784
               

               
Cow position:
               
chr20:6890894-6890584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
287, 7
               

               
Conread position:
               
463-812
               

               
Cow position:
               
chr20:35009565-35009897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
464-789
               

               
Cow position:
               
chr20:4332319-4332005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
464-820
               

               
Cow position:
               
chr20:23870634-23870981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
290, 134
               

               
Conread position:
               
465-632
               

               
Cow position:
               
chr20:21815745-21815578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
465-740
               

               
Cow position:
               
chr20:10996291-10996020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
465-820
               

               
Cow position:
               
chr20:20203401-20203051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
467-813
               

               
Cow position:
               
chr20:2169538-2169865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
468-687
               

               
Cow position:
               
chr20:7709601-7709821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
468-743
               

               
Cow position:
               
chr20:18392090-18392350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
468-754
               

               
Cow position:
               
chr20:35727751-35728057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
468-814
               

               
Cow position:
               
chr20:20739106-20739447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
468-820
               

               
Cow position:
               
chr20:14759484-14759829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
346, 170
               

               
Conread position:
               
468-820
               

               
Cow position:
               
chr20:18320612-18320960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
469-701
               

               
Cow position:
               
chr20:22030499-22030268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
469-733
               

               
Cow position:
               
chr20:33438800-33439058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
227, 170
               

               
Conread position:
               
469-811
               

               
Cow position:
               
chr20:5636664-5636325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr20:17846141-17845801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
469-819
               

               
Cow position:
               
chr20:9537312-9536971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 101
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr20:5827122-5826772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr20:39728631-39728283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 79
               

               
Conread position:
               
469-828
               

               
Cow position:
               
chr20:21714948-21714582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
470-666
               

               
Cow position:
               
chr20:12534561-12534756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
470-690
               

               
Cow position:
               
chr20:40158079-40157862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
470-716
               

               
Cow position:
               
chr20:20056307-20056549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
470-820
               

               
Cow position:
               
chr20:580741-581086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
164, 205
               

               
Conread position:
               
471-810
               

               
Cow position:
               
chr20:21761951-21761622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
471-828
               

               
Cow position:
               
chr20:23064657-23065000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
472-654
               

               
Cow position:
               
chr20:17388709-17388523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
472-705
               

               
Cow position:
               
chr20:10772384-10772150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
472-813
               

               
Cow position:
               
chr20:15565654-15565988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
250, 18
               

               
Conread position:
               
473-813
               

               
Cow position:
               
chr20:32988656-32988989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
473-814
               

               
Cow position:
               
chr20:11481959-11482297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
284, 51
               

               
Conread position:
               
473-820
               

               
Cow position:
               
chr20:28067248-28067591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
474-820
               

               
Cow position:
               
chr20:11550542-11550201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
475-725
               

               
Cow position:
               
chr20:38868808-38868570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
475-803
               

               
Cow position:
               
chr20:4334355-4334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
475-804
               

               
Cow position:
               
chr20:13025436-13025756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 168
               

               
Conread position:
               
475-811
               

               
Cow position:
               
chr20:21929077-21928749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
279, 26
               

               
Conread position:
               
475-812
               

               
Cow position:
               
chr20:6603216-6602885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
475-814
               

               
Cow position:
               
chr20:13752398-13752082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
476-812
               

               
Cow position:
               
chr20:15568776-15569106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 154
               

               
Conread position:
               
476-820
               

               
Cow position:
               
chr20:38578591-38578922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
162, 96
               

               
Conread position:
               
477-725
               

               
Cow position:
               
chr20:23540988-23541231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
204, 92
               

               
Conread position:
               
478-754
               

               
Cow position:
               
chr20:16509671-16509394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
478-813
               

               
Cow position:
               
chr20:20242254-20241943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
478-814
               

               
Cow position:
               
chr20:25009461-25009801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
156, 139
               

               
Conread position:
               
479-651
               

               
Cow position:
               
chr20:20158306-20158131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
479-777
               

               
Cow position:
               
chr20:36633982-36633692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr20:14100265-14100603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 99
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr20:38768293-38768618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
337, 96
               

               
Conread position:
               
479-828
               

               
Cow position:
               
chr20:34777350-34777015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
480-767
               

               
Cow position:
               
chr20:11188638-11188920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
240, 76
               

               
Conread position:
               
480-820
               

               
Cow position:
               
chr20:19751476-19751144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 159
               

               
Conread position:
               
481-780
               

               
Cow position:
               
chr20:14917453-14917172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
241, 150
               

               
Conread position:
               
481-781
               

               
Cow position:
               
chr20:20967489-20967205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
481-805
               

               
Cow position:
               
chr20:36010963-36010640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 31
               

               
Conread position:
               
481-813
               

               
Cow position:
               
chr20:15312837-15312502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
481-813
               

               
Cow position:
               
chr20:39415918-39415583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
147, 249
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr20:42458688-42459017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
482-725
               

               
Cow position:
               
chr20:35192932-35192704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
482-812
               

               
Cow position:
               
chr20:11176086-11176403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
275, 30
               

               
Conread position:
               
486-725
               

               
Cow position:
               
chr20:16492236-16491998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
486-804
               

               
Cow position:
               
chr20:42197476-42197179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
488-804
               

               
Cow position:
               
chr20:6096334-6096639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
488-809
               

               
Cow position:
               
chr20:1576257-1575946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr20:36207975-36207644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
488-820
               

               
Cow position:
               
chr20:33144392-33144720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
488-820
               

               
Cow position:
               
chr20:34108265-34107951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
489-772
               

               
Cow position:
               
chr20:32661726-32662019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 265
               

               
Conread position:
               
489-775
               

               
Cow position:
               
chr20:19459505-19459779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
489-820
               

               
Cow position:
               
chr20:9412648-9412327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
149, 162
               

               
Conread position:
               
490-656
               

               
Cow position:
               
chr20:361031-361189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
490-801
               

               
Cow position:
               
chr20:14540502-14540207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
491-698
               

               
Cow position:
               
chr20:24902135-24902345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
491-814
               

               
Cow position:
               
chr20:41627183-41627504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
491-820
               

               
Cow position:
               
chr20:40511598-40511923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
493-812
               

               
Cow position:
               
chr20:31323943-31323642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
260, 76
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr20:6257899-6258229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 151
               

               
Conread position:
               
497-814
               

               
Cow position:
               
chr20:35999844-35999529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
498-767
               

               
Cow position:
               
chr20:36040626-36040356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
501-782
               

               
Cow position:
               
chr20:25161977-25162258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 122
               

               
Conread position:
               
502-784
               

               
Cow position:
               
chr20:19363216-19363496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
502-805
               

               
Cow position:
               
chr20:23792751-23792458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
502-814
               

               
Cow position:
               
chr20:15235899-15235607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
255, 73
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr20:11542140-11542448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
504-805
               

               
Cow position:
               
chr20:28441472-28441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
506-813
               

               
Cow position:
               
chr20:33363661-33363363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 146
               

               
Conread position:
               
508-820
               

               
Cow position:
               
chr20:12441555-12441857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 124
               

               
Conread position:
               
509-766
               

               
Cow position:
               
chr20:19616632-19616374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
509-814
               

               
Cow position:
               
chr20:11453219-11453513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
510-812
               

               
Cow position:
               
chr20:15543758-15544058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
511-814
               

               
Cow position:
               
chr20:31464239-31464539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
512-807
               

               
Cow position:
               
chr20:40450159-40449856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 223
               

               
Conread position:
               
513-790
               

               
Cow position:
               
chr20:28955565-28955837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
513-809
               

               
Cow position:
               
chr20:25686212-25686505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 90
               

               
Conread position:
               
515-812
               

               
Cow position:
               
chr20:35797743-35797449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
516-741
               

               
Cow position:
               
chr20:17765198-17765420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 65
               

               
Conread position:
               
516-820
               

               
Cow position:
               
chr20:34001257-34001561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
519-814
               

               
Cow position:
               
chr20:3739873-3740158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
520-659
               

               
Cow position:
               
chr20:1009577-1009714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
522-820
               

               
Cow position:
               
chr20:3606834-3607119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
294, 46
               

               
Conread position:
               
525-813
               

               
Cow position:
               
chr20:32083958-32084242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
525-820
               

               
Cow position:
               
chr20:33169732-33170040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr20:14572244-14572514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 111
               

               
Conread position:
               
530-820
               

               
Cow position:
               
chr20:4206091-4205798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
530-820
               

               
Cow position:
               
chr20:6424086-6423799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
533-814
               

               
Cow position:
               
chr20:6501910-6501641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
217, 93
               

               
Conread position:
               
542-814
               

               
Cow position:
               
chr20:7211146-7210878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
214, 6
               

               
Conread position:
               
542-814
               

               
Cow position:
               
chr20:16715499-16715242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
548-814
               

               
Cow position:
               
chr20:23505929-23505670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
548-820
               

               
Cow position:
               
chr20:19146979-19146705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
550-754
               

               
Cow position:
               
chr20:24000698-24000899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
550-759
               

               
Cow position:
               
chr20:23103322-23103114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr20:22313061-22313322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
204, 112
               

               
Conread position:
               
550-820
               

               
Cow position:
               
chr20:39019795-39019530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
551-769
               

               
Cow position:
               
chr20:13795079-13794872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
200, 22
               

               
Conread position:
               
552-765
               

               
Cow position:
               
chr20:34901669-34901459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
552-775
               

               
Cow position:
               
chr20:11923150-11923366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
204, 35
               

               
Conread position:
               
552-814
               

               
Cow position:
               
chr20:9473515-9473772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
552-820
               

               
Cow position:
               
chr20:35958745-35958480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
264, 175
               

               
Conread position:
               
554-803
               

               
Cow position:
               
chr20:14735765-14735529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
555-820
               

               
Cow position:
               
chr20:11864038-11864301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
556-813
               

               
Cow position:
               
chr20:10348844-10348593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
557-747
               

               
Cow position:
               
chr20:21698486-21698294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
562-819
               

               
Cow position:
               
chr20:13967169-13967421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 166
               

               
Conread position:
               
563-775
               

               
Cow position:
               
chr20:24727449-24727247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
193, 65
               

               
Conread position:
               
564-814
               

               
Cow position:
               
chr20:282840-283087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
566-783
               

               
Cow position:
               
chr20:40257053-40256837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
185, 73
               

               
Conread position:
               
575-819
               

               
Cow position:
               
chr20:9701492-9701738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
578-725
               

               
Cow position:
               
chr20:37357679-37357533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
578-820
               

               
Cow position:
               
chr20:17904230-17903995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
578-820
               

               
Cow position:
               
chr20:31069709-31069470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
579-777
               

               
Cow position:
               
chr20:27003654-27003854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 155
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr20:7132420-7132190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
176, 62
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr20:18100478-18100258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr20:41403647-41403411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr20:19312995-19313230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr20:22704365-22704123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 148
               

               
Conread position:
               
581-820
               

               
Cow position:
               
chr20:18185635-18185414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
235, 58
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr20:24521809-24521586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr20:28832031-28831798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 120
               

               
Conread position:
               
590-767
               

               
Cow position:
               
chr20:24002375-24002201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
590-804
               

               
Cow position:
               
chr20:18500266-18500071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
590-807
               

               
Cow position:
               
chr20:39247972-39247759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
164, 137
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr20:31261783-31261575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr20:34240597-34240368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
590-814
               

               
Cow position:
               
chr20:32068792-32069015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
590-819
               

               
Cow position:
               
chr20:37272774-37272549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr20:9379465-9379244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
158, 42
               

               
Conread position:
               
591-814
               

               
Cow position:
               
chr20:31077611-31077391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
592-775
               

               
Cow position:
               
chr20:20312690-20312869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
162, 48
               

               
Conread position:
               
592-820
               

               
Cow position:
               
chr20:15760892-15761113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
593-813
               

               
Cow position:
               
chr20:4621284-4621496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr20:3035162-3034935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr20:23936348-23936575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr20:39036957-39036738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
594-820
               

               
Cow position:
               
chr20:24392034-24391815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
162, 48
               

               
Conread position:
               
595-814
               

               
Cow position:
               
chr20:26469008-26469223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
162, 50
               

               
Conread position:
               
599-824
               

               
Cow position:
               
chr20:6848681-6848451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
606-820
               

               
Cow position:
               
chr20:27340106-27339901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
607-814
               

               
Cow position:
               
chr20:14756025-14756226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
610-809
               

               
Cow position:
               
chr20:41309579-41309383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
616-814
               

               
Cow position:
               
chr20:33177227-33177024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
617-820
               

               
Cow position:
               
chr20:37200394-37200188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
618-818
               

               
Cow position:
               
chr20:19410330-19410532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
624-814
               

               
Cow position:
               
chr20:18837130-18837319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
631-820
               

               
Cow position:
               
chr20:8020919-8020729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
631-820
               

               
Cow position:
               
chr20:26680146-26679957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 102
               

               
Conread position:
               
634-828
               

               
Cow position:
               
chr20:18399779-18399589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
640-814
               

               
Cow position:
               
chr20:23679136-23679304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
640-820
               

               
Cow position:
               
chr20:22445626-22445800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
641-820
               

               
Cow position:
               
chr20:17733764-17733943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
645-814
               

               
Cow position:
               
chr20:27314682-27314522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
651-820
               

               
Cow position:
               
chr20:14740097-14740263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
655-814
               

               
Cow position:
               
chr20:5025308-5025460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
655-814
               

               
Cow position:
               
chr20:35760666-35760513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
655-820
               

               
Cow position:
               
chr20:16291468-16291307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
685-820
               

               
Cow position:
               
chr20:4781532-4781397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
686-814
               

               
Cow position:
               
chr20:24902497-24902623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 42
               
Show alignments to all cow chromosomes.