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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063I05.3
        

               
Conread position:
               
355-691
               

               
Cow position:
               
chr24:35365482-35365806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
359-595
               

               
Cow position:
               
chr24:4634942-4635181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
359-688
               

               
Cow position:
               
chr24:230503-230172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
360-733
               

               
Cow position:
               
chr24:36711411-36711050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
360-814
               

               
Cow position:
               
chr24:32609869-32609413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
361-583
               

               
Cow position:
               
chr24:22420175-22419959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
361-643
               

               
Cow position:
               
chr24:18884616-18884334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
361-697
               

               
Cow position:
               
chr24:18615218-18614885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
362-828
               

               
Cow position:
               
chr24:27607897-27608336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
364-812
               

               
Cow position:
               
chr24:27906652-27906211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
365-589
               

               
Cow position:
               
chr24:20017215-20017435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
365-752
               

               
Cow position:
               
chr24:39628093-39627701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
365-812
               

               
Cow position:
               
chr24:20249686-20250127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
365-813
               

               
Cow position:
               
chr24:5651792-5652201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
366-818
               

               
Cow position:
               
chr24:27300369-27299941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
368-613
               

               
Cow position:
               
chr24:41565888-41566126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
369-811
               

               
Cow position:
               
chr24:15693229-15692797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
371-765
               

               
Cow position:
               
chr24:10300284-10299903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
371-820
               

               
Cow position:
               
chr24:28722088-28721655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
372-749
               

               
Cow position:
               
chr24:6450706-6450334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
372-820
               

               
Cow position:
               
chr24:19179227-19179677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
373-820
               

               
Cow position:
               
chr24:16995085-16994661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
374-583
               

               
Cow position:
               
chr24:250329-250539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
374-622
               

               
Cow position:
               
chr24:34465297-34465546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
374-692
               

               
Cow position:
               
chr24:21606474-21606779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
374-814
               

               
Cow position:
               
chr24:27149587-27149172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr24:28303159-28303581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
375-652
               

               
Cow position:
               
chr24:11028487-11028754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
375-811
               

               
Cow position:
               
chr24:6103026-6102600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 41
               

               
Conread position:
               
375-828
               

               
Cow position:
               
chr24:20225942-20225499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
376-607
               

               
Cow position:
               
chr24:12121098-12120871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
376-614
               

               
Cow position:
               
chr24:17689400-17689643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
376-619
               

               
Cow position:
               
chr24:35310931-35310684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
376-665
               

               
Cow position:
               
chr24:18811031-18810762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
376-820
               

               
Cow position:
               
chr24:17860066-17860483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
163, 10
               

               
Conread position:
               
377-831
               

               
Cow position:
               
chr24:18484789-18485241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
378-602
               

               
Cow position:
               
chr24:34301838-34302056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
378-813
               

               
Cow position:
               
chr24:11005873-11005438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
379-641
               

               
Cow position:
               
chr24:22133363-22133112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
380-602
               

               
Cow position:
               
chr24:31383303-31383100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
380-814
               

               
Cow position:
               
chr24:30236070-30235644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
381-762
               

               
Cow position:
               
chr24:12200214-12200590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
381-791
               

               
Cow position:
               
chr24:20801148-20801550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
381-813
               

               
Cow position:
               
chr24:32204588-32205018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
381-814
               

               
Cow position:
               
chr24:43028127-43028551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
381-820
               

               
Cow position:
               
chr24:11887350-11886925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 40
               

               
Conread position:
               
382-591
               

               
Cow position:
               
chr24:43499854-43499649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
382-629
               

               
Cow position:
               
chr24:10294190-10294437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
382-683
               

               
Cow position:
               
chr24:880816-880530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
382-710
               

               
Cow position:
               
chr24:39523255-39523573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
382-788
               

               
Cow position:
               
chr24:22647141-22647545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
382-812
               

               
Cow position:
               
chr24:31812381-31811961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
382-814
               

               
Cow position:
               
chr24:10518752-10518330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
382-814
               

               
Cow position:
               
chr24:30483748-30484169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
383-820
               

               
Cow position:
               
chr24:32054853-32054440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
384-690
               

               
Cow position:
               
chr24:14550984-14550686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
384-694
               

               
Cow position:
               
chr24:3656165-3656476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
385-814
               

               
Cow position:
               
chr24:32822568-32823008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
385-828
               

               
Cow position:
               
chr24:15057576-15057164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
386-567
               

               
Cow position:
               
chr24:25947667-25947847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
386-608
               

               
Cow position:
               
chr24:16641105-16640883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
386-813
               

               
Cow position:
               
chr24:5142131-5141716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
387-636
               

               
Cow position:
               
chr24:30039065-30038817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
387-726
               

               
Cow position:
               
chr24:390292-389959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
387-754
               

               
Cow position:
               
chr24:19801032-19800679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
387-773
               

               
Cow position:
               
chr24:27219899-27220279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
387-789
               

               
Cow position:
               
chr24:13626478-13626078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr24:19658723-19658323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
387-814
               

               
Cow position:
               
chr24:34533329-34532898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 263
               

               
Conread position:
               
388-585
               

               
Cow position:
               
chr24:28788048-28787851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 180
               

               
Conread position:
               
388-600
               

               
Cow position:
               
chr24:39304721-39304939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
388-602
               

               
Cow position:
               
chr24:162191-161983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
388-814
               

               
Cow position:
               
chr24:41001456-41001031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
388-820
               

               
Cow position:
               
chr24:27267805-27267403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
389-798
               

               
Cow position:
               
chr24:34273007-34272598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
389-831
               

               
Cow position:
               
chr24:10671587-10671144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
390-777
               

               
Cow position:
               
chr24:28690874-28690499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
361, 28
               

               
Conread position:
               
390-814
               

               
Cow position:
               
chr24:22689385-22689811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
390-820
               

               
Cow position:
               
chr24:41980472-41980897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
391-633
               

               
Cow position:
               
chr24:28470479-28470731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
391-647
               

               
Cow position:
               
chr24:36035864-36036118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
391-715
               

               
Cow position:
               
chr24:20594733-20594407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
220, 29
               

               
Conread position:
               
391-813
               

               
Cow position:
               
chr24:35985546-35985943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
391-814
               

               
Cow position:
               
chr24:26928754-26929174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 101
               

               
Conread position:
               
391-820
               

               
Cow position:
               
chr24:25194453-25194034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
391-831
               

               
Cow position:
               
chr24:17284796-17285239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
392-583
               

               
Cow position:
               
chr24:37252342-37252156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
392-820
               

               
Cow position:
               
chr24:11840370-11839946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
393-603
               

               
Cow position:
               
chr24:18874635-18874842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
393-723
               

               
Cow position:
               
chr24:38478209-38478521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
396-717
               

               
Cow position:
               
chr24:2359003-2359309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
399-600
               

               
Cow position:
               
chr24:21715170-21715369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
399-602
               

               
Cow position:
               
chr24:2261849-2261647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
399-781
               

               
Cow position:
               
chr24:44987191-44987579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
400-602
               

               
Cow position:
               
chr24:33238076-33238285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
400-611
               

               
Cow position:
               
chr24:27066408-27066201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
400-635
               

               
Cow position:
               
chr24:42984573-42984338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
400-636
               

               
Cow position:
               
chr24:26001565-26001333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
400-814
               

               
Cow position:
               
chr24:35675709-35675318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
400-816
               

               
Cow position:
               
chr24:27096871-27096458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
111, 86
               

               
Conread position:
               
403-604
               

               
Cow position:
               
chr24:40055337-40055533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
403-622
               

               
Cow position:
               
chr24:18750885-18750664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-622
               

               
Cow position:
               
chr24:43219904-43220112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
403-634
               

               
Cow position:
               
chr24:19730957-19730727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
403-665
               

               
Cow position:
               
chr24:13586816-13587069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
403-671
               

               
Cow position:
               
chr24:19624040-19623771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 192
               

               
Conread position:
               
403-716
               

               
Cow position:
               
chr24:29605858-29606175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr24:26880932-26880628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
403-754
               

               
Cow position:
               
chr24:19000218-18999880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
403-780
               

               
Cow position:
               
chr24:352429-352800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
403-804
               

               
Cow position:
               
chr24:5632853-5633252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
403-811
               

               
Cow position:
               
chr24:2402202-2402598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr24:10499393-10498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
403-814
               

               
Cow position:
               
chr24:15861415-15861826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr24:3494056-3493660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr24:18474554-18474980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr24:27040224-27039806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr24:27844358-27844752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
403-820
               

               
Cow position:
               
chr24:38815149-38814739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 250
               

               
Conread position:
               
403-828
               

               
Cow position:
               
chr24:17311054-17311447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
403-838
               

               
Cow position:
               
chr24:32693895-32693454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
404-814
               

               
Cow position:
               
chr24:39849718-39850104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
409-828
               

               
Cow position:
               
chr24:40130307-40129884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
412-781
               

               
Cow position:
               
chr24:16645153-16645523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
416-781
               

               
Cow position:
               
chr24:28553408-28553743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
338, 53
               

               
Conread position:
               
417-602
               

               
Cow position:
               
chr24:5632253-5632441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
418-577
               

               
Cow position:
               
chr24:43027062-43027219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
418-619
               

               
Cow position:
               
chr24:42726620-42726413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
418-804
               

               
Cow position:
               
chr24:3165981-3165606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
418-814
               

               
Cow position:
               
chr24:24457080-24457472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
418-820
               

               
Cow position:
               
chr24:37650837-37650438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
418-820
               

               
Cow position:
               
chr24:42103523-42103142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
418-828
               

               
Cow position:
               
chr24:17104410-17104804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 60
               

               
Conread position:
               
419-820
               

               
Cow position:
               
chr24:31816736-31816353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
420-765
               

               
Cow position:
               
chr24:29587157-29586813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
167, 32
               

               
Conread position:
               
421-814
               

               
Cow position:
               
chr24:38347832-38347455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
335, 47
               

               
Conread position:
               
423-622
               

               
Cow position:
               
chr24:18668737-18668538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 137
               

               
Conread position:
               
426-754
               

               
Cow position:
               
chr24:18356902-18357220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
212, 41
               

               
Conread position:
               
427-796
               

               
Cow position:
               
chr24:28990712-28990358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
428-567
               

               
Cow position:
               
chr24:14373429-14373567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
428-598
               

               
Cow position:
               
chr24:7113382-7113206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
428-614
               

               
Cow position:
               
chr24:32230355-32230540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
428-645
               

               
Cow position:
               
chr24:6742374-6742158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
428-647
               

               
Cow position:
               
chr24:28061009-28060789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
428-651
               

               
Cow position:
               
chr24:8676974-8676755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
428-672
               

               
Cow position:
               
chr24:27284973-27284732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
428-682
               

               
Cow position:
               
chr24:22511710-22511458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
428-701
               

               
Cow position:
               
chr24:37974834-37975098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
428-705
               

               
Cow position:
               
chr24:37267814-37267540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
428-721
               

               
Cow position:
               
chr24:23863477-23863771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
202, 58
               

               
Conread position:
               
428-721
               

               
Cow position:
               
chr24:36008635-36008349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
428-763
               

               
Cow position:
               
chr24:27630548-27630230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
428-768
               

               
Cow position:
               
chr24:7476201-7476536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
323, 50
               

               
Conread position:
               
428-780
               

               
Cow position:
               
chr24:25756149-25756481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
202, 58
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr24:17294046-17294410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr24:36173630-36174006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
428-812
               

               
Cow position:
               
chr24:44040862-44041232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 41
               

               
Conread position:
               
428-813
               

               
Cow position:
               
chr24:7914158-7913774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 58
               

               
Conread position:
               
428-813
               

               
Cow position:
               
chr24:22114878-22114515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
328, 58
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr24:9222231-9222601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
428-814
               

               
Cow position:
               
chr24:18344215-18343823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
205, 49
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr24:17407540-17407157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
354, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr24:18741416-18741803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr24:28063099-28062713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr24:30313880-30314268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr24:33621329-33621718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
198, 58
               

               
Conread position:
               
428-820
               

               
Cow position:
               
chr24:35332877-35332486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
428-828
               

               
Cow position:
               
chr24:33098323-33098726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
202, 60
               

               
Conread position:
               
428-832
               

               
Cow position:
               
chr24:22079612-22079214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
429-620
               

               
Cow position:
               
chr24:36303169-36303355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
429-729
               

               
Cow position:
               
chr24:18313769-18314095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
429-812
               

               
Cow position:
               
chr24:29595652-29596039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr24:22225339-22224952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
429-814
               

               
Cow position:
               
chr24:33944554-33944182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 189
               

               
Conread position:
               
429-819
               

               
Cow position:
               
chr24:25321133-25320759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
325, 48
               

               
Conread position:
               
429-819
               

               
Cow position:
               
chr24:28496434-28496817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
200, 48
               

               
Conread position:
               
429-820
               

               
Cow position:
               
chr24:33372694-33372318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
273, 40
               

               
Conread position:
               
432-612
               

               
Cow position:
               
chr24:5152671-5152493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-618
               

               
Cow position:
               
chr24:32890902-32891080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
432-636
               

               
Cow position:
               
chr24:14989347-14989146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
432-641
               

               
Cow position:
               
chr24:23575014-23575222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
190, 54
               

               
Conread position:
               
432-740
               

               
Cow position:
               
chr24:17751963-17752266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
109, 81
               

               
Conread position:
               
432-767
               

               
Cow position:
               
chr24:31159775-31159438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 151
               

               
Conread position:
               
432-793
               

               
Cow position:
               
chr24:39143757-39143400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 48
               

               
Conread position:
               
432-809
               

               
Cow position:
               
chr24:19535108-19535468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
432-813
               

               
Cow position:
               
chr24:43371388-43371024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
432-814
               

               
Cow position:
               
chr24:23442436-23442806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
197, 54
               

               
Conread position:
               
432-819
               

               
Cow position:
               
chr24:20588318-20587935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
155, 36
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr24:29782309-29781929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
433-601
               

               
Cow position:
               
chr24:29677766-29677935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
433-820
               

               
Cow position:
               
chr24:39440421-39440789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
380, 53
               

               
Conread position:
               
434-679
               

               
Cow position:
               
chr24:4599854-4599618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
434-828
               

               
Cow position:
               
chr24:20943303-20942931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
436-726
               

               
Cow position:
               
chr24:37395066-37395351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
436-790
               

               
Cow position:
               
chr24:26554453-26554805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
314, 51
               

               
Conread position:
               
437-759
               

               
Cow position:
               
chr24:35576395-35576706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
244, 89
               

               
Conread position:
               
440-820
               

               
Cow position:
               
chr24:42344857-42345241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
189, 37
               

               
Conread position:
               
441-790
               

               
Cow position:
               
chr24:17832684-17833019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
316, 37
               

               
Conread position:
               
447-786
               

               
Cow position:
               
chr24:15347721-15347393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
448-688
               

               
Cow position:
               
chr24:41406032-41405793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
448-820
               

               
Cow position:
               
chr24:19465786-19466166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 38
               

               
Conread position:
               
449-805
               

               
Cow position:
               
chr24:20874813-20874460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
307, 25
               

               
Conread position:
               
451-812
               

               
Cow position:
               
chr24:34762022-34761670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
452-812
               

               
Cow position:
               
chr24:31359443-31359099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
304, 26
               

               
Conread position:
               
453-680
               

               
Cow position:
               
chr24:7046634-7046844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
453-781
               

               
Cow position:
               
chr24:19769630-19769297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 192
               

               
Conread position:
               
453-820
               

               
Cow position:
               
chr24:34742880-34742517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
455-667
               

               
Cow position:
               
chr24:42862747-42862540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
457-742
               

               
Cow position:
               
chr24:39290172-39289897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 213
               

               
Conread position:
               
458-814
               

               
Cow position:
               
chr24:2095760-2096114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
460-614
               

               
Cow position:
               
chr24:5143836-5143991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
464-820
               

               
Cow position:
               
chr24:35150641-35150297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
465-704
               

               
Cow position:
               
chr24:18368560-18368790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
237, 21
               

               
Conread position:
               
465-820
               

               
Cow position:
               
chr24:8887028-8886684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
467-666
               

               
Cow position:
               
chr24:40389724-40389525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
468-687
               

               
Cow position:
               
chr24:30308446-30308660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
169, 19
               

               
Conread position:
               
468-801
               

               
Cow position:
               
chr24:34008459-34008793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 260
               

               
Conread position:
               
468-812
               

               
Cow position:
               
chr24:39159438-39159769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
273, 34
               

               
Conread position:
               
468-828
               

               
Cow position:
               
chr24:201522-201873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
35, 196
               

               
Conread position:
               
469-574
               

               
Cow position:
               
chr24:10840807-10840912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
469-600
               

               
Cow position:
               
chr24:22235580-22235449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
469-621
               

               
Cow position:
               
chr24:7390226-7390372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
469-727
               

               
Cow position:
               
chr24:39791655-39791396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
469-754
               

               
Cow position:
               
chr24:18331832-18331557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
469-780
               

               
Cow position:
               
chr24:14171579-14171889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
469-800
               

               
Cow position:
               
chr24:28253834-28253495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 205
               

               
Conread position:
               
469-811
               

               
Cow position:
               
chr24:11119390-11119060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
270, 152
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr24:2675424-2675104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr24:14648246-14648560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
469-814
               

               
Cow position:
               
chr24:28326965-28327308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr24:18390188-18390521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr24:27052389-27052727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
469-820
               

               
Cow position:
               
chr24:41068374-41068036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
470-749
               

               
Cow position:
               
chr24:5683391-5683116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
470-766
               

               
Cow position:
               
chr24:32071077-32070785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
470-781
               

               
Cow position:
               
chr24:18970395-18970701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 171
               

               
Conread position:
               
470-804
               

               
Cow position:
               
chr24:15373517-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 168
               

               
Conread position:
               
470-817
               

               
Cow position:
               
chr24:40850263-40849930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
249, 71
               

               
Conread position:
               
471-805
               

               
Cow position:
               
chr24:33465511-33465817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
471-813
               

               
Cow position:
               
chr24:27290982-27290651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
471-817
               

               
Cow position:
               
chr24:3664287-3663936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
150, 83
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr24:29673631-29673287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 25
               

               
Conread position:
               
474-762
               

               
Cow position:
               
chr24:43683356-43683647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
474-820
               

               
Cow position:
               
chr24:30229583-30229236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
475-674
               

               
Cow position:
               
chr24:23000119-22999922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
475-814
               

               
Cow position:
               
chr24:15246536-15246860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
163, 196
               

               
Conread position:
               
475-820
               

               
Cow position:
               
chr24:24755550-24755217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
478-620
               

               
Cow position:
               
chr24:15263980-15263837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
478-667
               

               
Cow position:
               
chr24:28043079-28042889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
478-719
               

               
Cow position:
               
chr24:28234147-28233914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
478-820
               

               
Cow position:
               
chr24:5754939-5754609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
273, 48
               

               
Conread position:
               
479-810
               

               
Cow position:
               
chr24:16510080-16509751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 252
               

               
Conread position:
               
479-820
               

               
Cow position:
               
chr24:29679208-29679543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
480-700
               

               
Cow position:
               
chr24:16895038-16895247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
216, 9
               

               
Conread position:
               
480-820
               

               
Cow position:
               
chr24:1269886-1269572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
481-726
               

               
Cow position:
               
chr24:28289153-28289391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-802
               

               
Cow position:
               
chr24:10125985-10125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
481-814
               

               
Cow position:
               
chr24:17955344-17955672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
482-814
               

               
Cow position:
               
chr24:42825405-42825723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
483-710
               

               
Cow position:
               
chr24:29561474-29561700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
152, 186
               

               
Conread position:
               
483-742
               

               
Cow position:
               
chr24:4725068-4724818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
483-824
               

               
Cow position:
               
chr24:814173-814502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
484-820
               

               
Cow position:
               
chr24:39905349-39905694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
485-814
               

               
Cow position:
               
chr24:24250819-24250507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
160, 85
               

               
Conread position:
               
488-686
               

               
Cow position:
               
chr24:34496218-34496016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr24:27824556-27824239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
152, 209
               

               
Conread position:
               
488-814
               

               
Cow position:
               
chr24:43200182-43200498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
489-820
               

               
Cow position:
               
chr24:29063566-29063878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
327, 75
               

               
Conread position:
               
492-767
               

               
Cow position:
               
chr24:16895348-16895618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
262, 13
               

               
Conread position:
               
493-716
               

               
Cow position:
               
chr24:27418015-27418230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
493-809
               

               
Cow position:
               
chr24:6140862-6141184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr24:28319120-28319432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
493-820
               

               
Cow position:
               
chr24:29389323-29389014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 124
               

               
Conread position:
               
496-770
               

               
Cow position:
               
chr24:15544320-15544600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
496-820
               

               
Cow position:
               
chr24:43364444-43364131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 67
               

               
Conread position:
               
496-828
               

               
Cow position:
               
chr24:29171047-29170727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
231, 58
               

               
Conread position:
               
502-803
               

               
Cow position:
               
chr24:39227074-39226784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
254, 70
               

               
Conread position:
               
502-815
               

               
Cow position:
               
chr24:31036430-31036131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
502-820
               

               
Cow position:
               
chr24:33723765-33724083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
502-824
               

               
Cow position:
               
chr24:31324364-31324043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
503-814
               

               
Cow position:
               
chr24:39483555-39483248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
503-820
               

               
Cow position:
               
chr24:23616776-23616462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
504-814
               

               
Cow position:
               
chr24:32369837-32370135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
505-749
               

               
Cow position:
               
chr24:19736257-19736489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 119
               

               
Conread position:
               
509-788
               

               
Cow position:
               
chr24:28599787-28600067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 179
               

               
Conread position:
               
509-814
               

               
Cow position:
               
chr24:22095492-22095195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
510-782
               

               
Cow position:
               
chr24:30897465-30897735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
243, 13
               

               
Conread position:
               
511-796
               

               
Cow position:
               
chr24:15707374-15707650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
511-814
               

               
Cow position:
               
chr24:19123-19446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
87, 167
               

               
Conread position:
               
520-780
               

               
Cow position:
               
chr24:27054473-27054211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 208
               

               
Conread position:
               
520-814
               

               
Cow position:
               
chr24:20024673-20024382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 19
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr24:15508482-15508767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
296, 50
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr24:43432852-43432569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
296, 75
               

               
Conread position:
               
523-814
               

               
Cow position:
               
chr24:3152519-3152802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
525-820
               

               
Cow position:
               
chr24:30544809-30545088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
206, 48
               

               
Conread position:
               
528-814
               

               
Cow position:
               
chr24:27340965-27341249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr24:41986047-41985751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
533-814
               

               
Cow position:
               
chr24:212036-211756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
542-814
               

               
Cow position:
               
chr24:3430773-3430510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
213, 43
               

               
Conread position:
               
550-805
               

               
Cow position:
               
chr24:39833483-39833732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
205, 81
               

               
Conread position:
               
550-814
               

               
Cow position:
               
chr24:2970573-2970832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
550-814
               

               
Cow position:
               
chr24:10012784-10012547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
558-814
               

               
Cow position:
               
chr24:27874619-27874379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
559-814
               

               
Cow position:
               
chr24:21918205-21918443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
562-812
               

               
Cow position:
               
chr24:591921-591687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
245, 13
               

               
Conread position:
               
563-811
               

               
Cow position:
               
chr24:7917342-7917591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 77
               

               
Conread position:
               
571-802
               

               
Cow position:
               
chr24:5688-5911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
573-814
               

               
Cow position:
               
chr24:35794726-35794965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
576-820
               

               
Cow position:
               
chr24:35074099-35073860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
175, 41
               

               
Conread position:
               
579-805
               

               
Cow position:
               
chr24:250575-250793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
177, 60
               

               
Conread position:
               
579-814
               

               
Cow position:
               
chr24:15473361-15473130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
172, 52
               

               
Conread position:
               
580-792
               

               
Cow position:
               
chr24:34782786-34782990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
167, 25
               

               
Conread position:
               
580-820
               

               
Cow position:
               
chr24:27781973-27781722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 202
               

               
Conread position:
               
581-820
               

               
Cow position:
               
chr24:39218839-39219079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
585-814
               

               
Cow position:
               
chr24:34315353-34315132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
156, 142
               

               
Conread position:
               
589-811
               

               
Cow position:
               
chr24:36486072-36486284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
589-811
               

               
Cow position:
               
chr24:36554840-36555052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
589-813
               

               
Cow position:
               
chr24:42007733-42007521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr24:18405318-18405540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
589-820
               

               
Cow position:
               
chr24:27968077-27967848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
590-786
               

               
Cow position:
               
chr24:19634065-19633872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 60
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr24:28354147-28353919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
590-820
               

               
Cow position:
               
chr24:40184616-40184391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 49
               

               
Conread position:
               
590-827
               

               
Cow position:
               
chr24:18695611-18695381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
226, 41
               

               
Conread position:
               
592-814
               

               
Cow position:
               
chr24:28332284-28332510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
592-820
               

               
Cow position:
               
chr24:16625496-16625733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 174
               

               
Conread position:
               
593-814
               

               
Cow position:
               
chr24:31382890-31382683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
594-828
               

               
Cow position:
               
chr24:18266174-18266410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
597-792
               

               
Cow position:
               
chr24:29707809-29708007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
599-812
               

               
Cow position:
               
chr24:11876871-11876660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
606-810
               

               
Cow position:
               
chr24:21860246-21860442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
606-820
               

               
Cow position:
               
chr24:27207219-27207427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
608-820
               

               
Cow position:
               
chr24:5152210-5152001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
608-820
               

               
Cow position:
               
chr24:40908994-40908784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 9
               

               
Conread position:
               
612-813
               

               
Cow position:
               
chr24:39493267-39493073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
617-828
               

               
Cow position:
               
chr24:6340979-6340779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
626-813
               

               
Cow position:
               
chr24:21768605-21768418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 104
               

               
Conread position:
               
631-814
               

               
Cow position:
               
chr24:27719804-27719978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
632-809
               

               
Cow position:
               
chr24:40055777-40055942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
633-803
               

               
Cow position:
               
chr24:34579011-34579180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
640-820
               

               
Cow position:
               
chr24:27810131-27809950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
642-814
               

               
Cow position:
               
chr24:31388474-31388309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
645-814
               

               
Cow position:
               
chr24:27941070-27941233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
645-820
               

               
Cow position:
               
chr24:27543538-27543708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
647-820
               

               
Cow position:
               
chr24:18324559-18324384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
107, 80
               

               
Conread position:
               
651-814
               

               
Cow position:
               
chr24:30776732-30776893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
655-820
               

               
Cow position:
               
chr24:33238613-33238780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
655-828
               

               
Cow position:
               
chr24:11007149-11006977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
656-820
               

               
Cow position:
               
chr24:18734423-18734587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 71
               
Show alignments to all cow chromosomes.