Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8064A16.3
        

               Conread position:
               69-251
               

               Cow position:
               chr29:43990393-43990211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               253-377
               

               Cow position:
               chr29:43988427-43988303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               118
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-354
               

               Cow position:
               chr29:30823715-30823815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               377-498
               

               Cow position:
               chr29:43987892-43987771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               495-723
               

               Cow position:
               chr29:43987172-43986944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               705-857
               

               Cow position:
               chr29:43985364-43985214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               844-990
               

               Cow position:
               chr29:43984905-43984758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               136
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               989-1092
               

               Cow position:
               chr29:43984674-43984571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1088-1509
               

               Cow position:
               chr29:43984493-43984063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 180
               

               Conread position:
               1631-1944
               

               Cow position:
               chr29:43983990-43983672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               154, 33
               
Show alignments to all cow chromosomes.