Cow genome map

Conread name: Ss1.1-Pig4-TMW8064G02.3

Conread position: 133-527
Cow position: chrX:39352300-39351911 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 269
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 74, 62

Conread position: 139-427
Cow position: chrX:1958640-1958349 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 152-585
Cow position: chrX:15718331-15717884 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 159-542
Cow position: chrX:8541841-8542220 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 48

Conread position: 159-590
Cow position: chrX:6196383-6195954 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 128

Conread position: 164-587
Cow position: chrX:27404570-27404149 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 64

Conread position: 168-590
Cow position: chrX:2664390-2664809 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 7

Conread position: 169-537
Cow position: chrX:23666563-23666927 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 103

Conread position: 169-542
Cow position: chrX:34543147-34543512 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 169-558
Cow position: chrX:29875621-29875227 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 135

Conread position: 172-568
Cow position: chrX:16000095-15999724 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 17

Conread position: 175-470
Cow position: chrX:6642076-6642381 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 53

Conread position: 175-542
Cow position: chrX:24826723-24827088 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 14

Conread position: 175-585
Cow position: chrX:6906420-6906021 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 17

Conread position: 178-594
Cow position: chrX:28110889-28111310 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 200, 31

Conread position: 182-420
Cow position: chrX:11632040-11632279 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 31, 116

Conread position: 182-590
Cow position: chrX:37764804-37764397 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 182-590
Cow position: chrX:37773041-37772634 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 182-594
Cow position: chrX:12111263-12110851 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 75

Conread position: 183-380
Cow position: chrX:631228-631030 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 51

Conread position: 183-566
Cow position: chrX:19929827-19930203 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 76

Conread position: 183-587
Cow position: chrX:5423673-5423269 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 263

Conread position: 183-590
Cow position: chrX:9018911-9018503 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 264

Conread position: 184-590
Cow position: chrX:10528381-10527974 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 64

Conread position: 185-586
Cow position: chrX:29777436-29777837 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 262

Conread position: 187-541
Cow position: chrX:9391450-9391096 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 63

Conread position: 187-590
Cow position: chrX:26531356-26531758 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 188-390
Cow position: chrX:22564288-22564085 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 58

Conread position: 188-431
Cow position: chrX:25360961-25361205 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 25, 7

Conread position: 188-534
Cow position: chrX:33815546-33815893 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 25

Conread position: 188-542
Cow position: chrX:6044090-6043736 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 218

Conread position: 188-558
Cow position: chrX:25436532-25436162 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 7

Conread position: 188-567
Cow position: chrX:18247747-18248116 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 67

Conread position: 188-584
Cow position: chrX:15329052-15329447 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 11

Conread position: 188-584
Cow position: chrX:20970314-20970718 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 262
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 56

Conread position: 188-585
Cow position: chrX:5353904-5353508 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 188-585
Cow position: chrX:23382786-23382377 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 260
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 251

Conread position: 188-585
Cow position: chrX:28646584-28646191 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 67

Conread position: 188-587
Cow position: chrX:24292280-24291885 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 7

Conread position: 188-590
Cow position: chrX:7572780-7573179 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 188-590
Cow position: chrX:16279051-16279449 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 7

Conread position: 188-590
Cow position: chrX:24467726-24467325 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 7

Conread position: 189-590
Cow position: chrX:12347276-12347678 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 58

Conread position: 189-590
Cow position: chrX:15780981-15781381 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 256

Conread position: 190-438
Cow position: chrX:30060288-30060538 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 191-533
Cow position: chrX:20726161-20726500 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 162

Conread position: 191-553
Cow position: chrX:44901545-44901911 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 191-585
Cow position: chrX:23832036-23831655 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 48, 19

Conread position: 191-590
Cow position: chrX:20098723-20099122 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 255

Conread position: 192-495
Cow position: chrX:18468171-18468476 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 67

Conread position: 193-399
Cow position: chrX:23022716-23022924 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 193-419
Cow position: chrX:18455379-18455151 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 84

Conread position: 193-470
Cow position: chrX:40450228-40449953 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 106

Conread position: 193-505
Cow position: chrX:7288234-7288553 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 193-506
Cow position: chrX:23452042-23451744 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 116

Conread position: 193-522
Cow position: chrX:18711938-18712267 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 57

Conread position: 193-541
Cow position: chrX:33493135-33493480 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 233

Conread position: 193-542
Cow position: chrX:2185643-2185976 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 47

Conread position: 193-542
Cow position: chrX:4408964-4409321 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 186, 49

Conread position: 193-542
Cow position: chrX:16324841-16324498 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 193-542
Cow position: chrX:25404953-25404606 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 55

Conread position: 193-547
Cow position: chrX:6766342-6765983 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 193-549
Cow position: chrX:39939351-39938994 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 322

Conread position: 193-565
Cow position: chrX:38999306-38999671 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 110

Conread position: 193-585
Cow position: chrX:23341589-23341202 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 193-585
Cow position: chrX:31202244-31202635 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 105

Conread position: 193-586
Cow position: chrX:21415484-21415884 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 26, 116

Conread position: 193-586
Cow position: chrX:27485806-27486204 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 193-586
Cow position: chrX:30531624-30531236 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 114

Conread position: 193-586
Cow position: chrX:41114604-41115000 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 254
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 191, 32

Conread position: 193-587
Cow position: chrX:6372584-6372978 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 253

Conread position: 193-587
Cow position: chrX:40452817-40452416 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 193-590
Cow position: chrX:6454100-6454495 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 193-590
Cow position: chrX:14462712-14463113 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 54

Conread position: 193-590
Cow position: chrX:29225881-29226276 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 166

Conread position: 193-592
Cow position: chrX:29915821-29915425 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 193-594
Cow position: chrX:29288980-29289380 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 168

Conread position: 194-442
Cow position: chrX:34990465-34990714 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 33, 97

Conread position: 194-529
Cow position: chrX:3211141-3210811 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 86

Conread position: 194-540
Cow position: chrX:5246651-5247001 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 19, 242

Conread position: 194-592
Cow position: chrX:23121801-23122186 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 194-594
Cow position: chrX:6543663-6544060 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 194-594
Cow position: chrX:44054207-44054604 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 234

Conread position: 195-314
Cow position: chrX:39511737-39511857 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 195-352
Cow position: chrX:619414-619256 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 195-354
Cow position: chrX:10438533-10438374 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 91

Conread position: 195-354
Cow position: chrX:39556390-39556229 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 195-372
Cow position: chrX:22869500-22869322 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 71

Conread position: 195-377
Cow position: chrX:14049789-14049606 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 52

Conread position: 195-377
Cow position: chrX:16744591-16744774 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 52

Conread position: 195-377
Cow position: chrX:34719918-34720101 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 195-381
Cow position: chrX:37069127-37069318 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 195-403
Cow position: chrX:34253634-34253843 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 12, 175

Conread position: 195-404
Cow position: chrX:15306327-15306116 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 171

Conread position: 195-407
Cow position: chrX:20998871-20998656 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 195-410
Cow position: chrX:5292525-5292306 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 195-410
Cow position: chrX:7178068-7178273 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 82

Conread position: 195-411
Cow position: chrX:10301527-10301742 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 45

Conread position: 195-416
Cow position: chrX:13030806-13030583 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 195-420
Cow position: chrX:15151271-15151052 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 61

Conread position: 195-423
Cow position: chrX:40542076-40542301 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 66

Conread position: 195-426
Cow position: chrX:2293195-2292962 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 195-426
Cow position: chrX:10465190-10465423 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 195-426
Cow position: chrX:28706507-28706740 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 195-427
Cow position: chrX:37080114-37079881 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 52

Conread position: 195-428
Cow position: chrX:29907797-29907561 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 195-431
Cow position: chrX:4768121-4768357 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 222

Conread position: 195-431
Cow position: chrX:36479230-36478992 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 195-436
Cow position: chrX:16782685-16782928 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 195-436
Cow position: chrX:17158423-17158180 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 195-438
Cow position: chrX:865801-866046 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 195-438
Cow position: chrX:3081726-3081481 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 53

Conread position: 195-438
Cow position: chrX:39730734-39730490 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 116

Conread position: 195-439
Cow position: chrX:12095180-12094934 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 195-443
Cow position: chrX:38007577-38007323 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 195-450
Cow position: chrX:22125462-22125204 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 195-460
Cow position: chrX:5332032-5331765 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 195-466
Cow position: chrX:487942-488216 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 18, 59

Conread position: 195-500
Cow position: chrX:17230911-17231207 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 98

Conread position: 195-506
Cow position: chrX:18194095-18194403 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 235

Conread position: 195-520
Cow position: chrX:9642027-9641705 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 251

Conread position: 195-534
Cow position: chrX:40475424-40475100 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 136

Conread position: 195-540
Cow position: chrX:13928346-13928007 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 59

Conread position: 195-540
Cow position: chrX:38961441-38961099 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 245

Conread position: 195-541
Cow position: chrX:9837523-9837868 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 191

Conread position: 195-541
Cow position: chrX:32430744-32431079 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 113

Conread position: 195-541
Cow position: chrX:37955306-37955650 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 61

Conread position: 195-541
Cow position: chrX:44052307-44052655 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 12, 229

Conread position: 195-542
Cow position: chrX:19228664-19228323 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 112

Conread position: 195-549
Cow position: chrX:36975245-36975600 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 255

Conread position: 195-554
Cow position: chrX:2382872-2383215 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 109

Conread position: 195-556
Cow position: chrX:2048517-2048869 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 18, 52

Conread position: 195-556
Cow position: chrX:14030423-14030784 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-558
Cow position: chrX:9635848-9635477 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 229

Conread position: 195-558
Cow position: chrX:36557194-36557555 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 81

Conread position: 195-559
Cow position: chrX:22409315-22408950 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 240

Conread position: 195-560
Cow position: chrX:6202912-6203279 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 178

Conread position: 195-563
Cow position: chrX:30825053-30825421 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-566
Cow position: chrX:37489130-37489492 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 195-568
Cow position: chrX:13404947-13404567 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 158

Conread position: 195-568
Cow position: chrX:26752518-26752143 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 253

Conread position: 195-568
Cow position: chrX:28503741-28504104 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 46

Conread position: 195-575
Cow position: chrX:6581339-6581716 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-579
Cow position: chrX:35694445-35694834 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 68

Conread position: 195-584
Cow position: chrX:23317016-23316628 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 249

Conread position: 195-584
Cow position: chrX:23387133-23386745 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 195-584
Cow position: chrX:30822922-30823309 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 195-584
Cow position: chrX:41847129-41846740 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 180

Conread position: 195-585
Cow position: chrX:4905585-4905194 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 252

Conread position: 195-585
Cow position: chrX:5334414-5334025 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-585
Cow position: chrX:5375763-5376164 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 195-585
Cow position: chrX:11461466-11461077 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-585
Cow position: chrX:11950084-11949698 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 25

Conread position: 195-585
Cow position: chrX:12249206-12249600 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 140

Conread position: 195-585
Cow position: chrX:16853985-16853594 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 252

Conread position: 195-585
Cow position: chrX:22538549-22538159 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 235

Conread position: 195-585
Cow position: chrX:23927780-23927377 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 256
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 66

Conread position: 195-585
Cow position: chrX:25575364-25575756 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 245

Conread position: 195-585
Cow position: chrX:27977426-27977034 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 253

Conread position: 195-585
Cow position: chrX:28518315-28517929 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 195-585
Cow position: chrX:30228709-30228316 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 255

Conread position: 195-585
Cow position: chrX:34840366-34839978 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 64

Conread position: 195-586
Cow position: chrX:2559555-2559166 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-586
Cow position: chrX:4630294-4629895 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 109

Conread position: 195-586
Cow position: chrX:7805782-7806173 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 32

Conread position: 195-586
Cow position: chrX:8434798-8434411 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 195-587
Cow position: chrX:671598-671212 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-587
Cow position: chrX:4343156-4343546 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 60

Conread position: 195-587
Cow position: chrX:4622549-4622157 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-587
Cow position: chrX:11145932-11145541 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-587
Cow position: chrX:17054974-17055366 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 195-587
Cow position: chrX:17782904-17783296 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 195-587
Cow position: chrX:17994864-17995256 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 195-587
Cow position: chrX:21686024-21686411 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-587
Cow position: chrX:26617516-26617124 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-587
Cow position: chrX:27759112-27759504 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-587
Cow position: chrX:30180522-30180129 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 195-587
Cow position: chrX:34761471-34761863 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 251

Conread position: 195-587
Cow position: chrX:37815996-37816385 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 195-587
Cow position: chrX:41156716-41157108 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 243

Conread position: 195-587
Cow position: chrX:41594877-41594473 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 195-587
Cow position: chrX:41879525-41879134 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 229

Conread position: 195-589
Cow position: chrX:21785174-21785566 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 175

Conread position: 195-589
Cow position: chrX:47144481-47144886 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 222

Conread position: 195-590
Cow position: chrX:362048-361653 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:1576858-1576463 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 245

Conread position: 195-590
Cow position: chrX:1976192-1975797 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:2160170-2160565 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:2932315-2931920 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:3096349-3095970 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 195-590
Cow position: chrX:3372448-3372058 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:3464671-3464276 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:5123954-5123561 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 195-590
Cow position: chrX:5280448-5280053 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:5289281-5288887 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:5408460-5408855 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:5646699-5646304 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:5866551-5866946 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:5892633-5893028 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:7119239-7118844 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 223

Conread position: 195-590
Cow position: chrX:7486269-7486664 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:8641193-8641588 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:9085928-9085533 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:9128461-9128856 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:10445010-10444614 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:10923166-10922771 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:11358660-11358265 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:11716057-11715662 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:12001742-12001347 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:12145507-12145894 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 100

Conread position: 195-590
Cow position: chrX:12360293-12360689 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 247

Conread position: 195-590
Cow position: chrX:12458103-12458498 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 251

Conread position: 195-590
Cow position: chrX:13071199-13070802 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 254

Conread position: 195-590
Cow position: chrX:13091759-13091362 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 254

Conread position: 195-590
Cow position: chrX:14458762-14458368 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:14781941-14781545 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:15091364-15090967 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:15346564-15346169 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:16285616-16286009 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:16478320-16478702 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:16734930-16735324 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 195-590
Cow position: chrX:18024445-18024839 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 247

Conread position: 195-590
Cow position: chrX:18078506-18078110 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 252

Conread position: 195-590
Cow position: chrX:18451674-18451279 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:19109636-19109241 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:19399183-19399578 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:19473755-19473361 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:19775075-19774680 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 251

Conread position: 195-590
Cow position: chrX:20020982-20021363 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:20032426-20032031 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:21768209-21768604 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:21973348-21973739 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 182, 15

Conread position: 195-590
Cow position: chrX:22493412-22493807 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 235

Conread position: 195-590
Cow position: chrX:22612790-22613186 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:23038592-23038197 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:24509272-24509667 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:24975349-24975737 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 221

Conread position: 195-590
Cow position: chrX:26275543-26275939 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 61

Conread position: 195-590
Cow position: chrX:26506536-26506144 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:27095524-27095919 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:27594775-27594382 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:28313830-28314225 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:28752935-28752540 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 245

Conread position: 195-590
Cow position: chrX:29169936-29169534 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 238

Conread position: 195-590
Cow position: chrX:29912744-29913139 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:30143879-30143485 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 252

Conread position: 195-590
Cow position: chrX:30172302-30171910 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:30199587-30199192 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:30455217-30454822 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 195-590
Cow position: chrX:30752180-30752574 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 59

Conread position: 195-590
Cow position: chrX:30816864-30816469 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:30821989-30822384 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:30836778-30837173 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:30965506-30965901 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:32039437-32039043 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 203

Conread position: 195-590
Cow position: chrX:32331036-32331431 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:33763749-33764144 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 235

Conread position: 195-590
Cow position: chrX:34519131-34519526 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 195-590
Cow position: chrX:35240271-35240664 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 58

Conread position: 195-590
Cow position: chrX:35533256-35533651 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:36195497-36195892 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:36729789-36730184 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:37061386-37060991 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:38230862-38230467 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:39185578-39185973 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-590
Cow position: chrX:39383676-39383279 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 258
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 54

Conread position: 195-590
Cow position: chrX:40591091-40591486 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-590
Cow position: chrX:41488760-41488365 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-590
Cow position: chrX:45903582-45903978 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 252

Conread position: 195-593
Cow position: chrX:2790642-2791043 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 257
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 37

Conread position: 195-593
Cow position: chrX:29942555-29942954 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 250

Conread position: 195-594
Cow position: chrX:160833-161232 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 234

Conread position: 195-594
Cow position: chrX:4326086-4325693 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 259
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 117

Conread position: 195-594
Cow position: chrX:4633451-4633047 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 103

Conread position: 195-594
Cow position: chrX:6012699-6012302 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 272
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 188, 93

Conread position: 195-594
Cow position: chrX:20582437-20582834 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 195-594
Cow position: chrX:20801178-20801583 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 195-594
Cow position: chrX:21592692-21593087 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 175

Conread position: 195-594
Cow position: chrX:34442037-34441647 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 103

Conread position: 195-594
Cow position: chrX:34554141-34554530 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 137

Conread position: 195-594
Cow position: chrX:38852564-38852959 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 251

Conread position: 195-594
Cow position: chrX:42540004-42540407 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 268
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 59

Conread position: 195-595
Cow position: chrX:6558255-6558655 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 195-595
Cow position: chrX:17291335-17291732 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 195-595
Cow position: chrX:38438893-38439278 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 138

Conread position: 195-599
Cow position: chrX:27949776-27950186 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 257
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 160

Conread position: 195-666
Cow position: chrX:22521816-22521343 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 196-330
Cow position: chrX:1947552-1947418 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 196-393
Cow position: chrX:21565546-21565744 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 71

Conread position: 196-436
Cow position: chrX:12092620-12092383 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 37

Conread position: 196-542
Cow position: chrX:39558959-39558618 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 121

Conread position: 196-546
Cow position: chrX:21662505-21662848 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 46

Conread position: 196-573
Cow position: chrX:25329427-25329791 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 181

Conread position: 196-580
Cow position: chrX:24769450-24769070 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 43

Conread position: 196-583
Cow position: chrX:15574480-15574093 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 241
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 207

Conread position: 196-585
Cow position: chrX:17064780-17064388 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 174

Conread position: 196-585
Cow position: chrX:19464954-19464569 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 246
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 52

Conread position: 196-585
Cow position: chrX:24441833-24441452 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 82

Conread position: 196-586
Cow position: chrX:1055988-1055592 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 66

Conread position: 196-586
Cow position: chrX:28588378-28588766 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 196-587
Cow position: chrX:34866425-34866053 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 76

Conread position: 196-587
Cow position: chrX:41434004-41433623 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 196-590
Cow position: chrX:7512898-7513285 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 136

Conread position: 196-590
Cow position: chrX:16711361-16711754 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 174

Conread position: 196-590
Cow position: chrX:36535328-36534935 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 249

Conread position: 196-590
Cow position: chrX:38014501-38014894 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 249

Conread position: 196-594
Cow position: chrX:11674463-11674868 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 124

Conread position: 196-594
Cow position: chrX:13912502-13912884 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 86

Conread position: 196-594
Cow position: chrX:31488920-31489315 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 196-596
Cow position: chrX:30919985-30919586 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 100

Conread position: 197-438
Cow position: chrX:26764685-26764442 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 197-510
Cow position: chrX:16808428-16808119 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 200-584
Cow position: chrX:30139373-30138990 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 245

Conread position: 200-590
Cow position: chrX:9153771-9154160 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 46

Conread position: 200-594
Cow position: chrX:2524326-2523926 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 233

Conread position: 201-399
Cow position: chrX:40365331-40365133 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 178, 56

Conread position: 201-407
Cow position: chrX:30159583-30159376 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 173, 0

Conread position: 201-413
Cow position: chrX:21196434-21196646 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 201, 206

Conread position: 201-419
Cow position: chrX:2300292-2300510 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 178, 203

Conread position: 201-435
Cow position: chrX:42380430-42380194 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 232

Conread position: 201-461
Cow position: chrX:12823412-12823672 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 177, 221

Conread position: 201-540
Cow position: chrX:16086711-16086377 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 45

Conread position: 201-542
Cow position: chrX:24174540-24174200 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 54

Conread position: 201-565
Cow position: chrX:28820148-28820514 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 212

Conread position: 201-584
Cow position: chrX:37905414-37905813 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 33

Conread position: 201-585
Cow position: chrX:6493144-6493525 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 216

Conread position: 201-585
Cow position: chrX:20504174-20504561 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 24

Conread position: 201-587
Cow position: chrX:34993583-34993976 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 71

Conread position: 201-590
Cow position: chrX:22556913-22557301 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 244

Conread position: 201-590
Cow position: chrX:34009159-34009550 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 46

Conread position: 201-590
Cow position: chrX:44168898-44168509 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 240

Conread position: 202-439
Cow position: chrX:30980480-30980241 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 223

Conread position: 205-377
Cow position: chrX:33685027-33684855 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 206-366
Cow position: chrX:1616820-1616661 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 6

Conread position: 209-594
Cow position: chrX:33614817-33615209 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 252
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 151, 227

Conread position: 211-542
Cow position: chrX:40496175-40495849 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 173, 15

Conread position: 212-571
Cow position: chrX:18152834-18152477 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 63

Conread position: 212-584
Cow position: chrX:3396350-3395967 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 171, 33

Conread position: 212-590
Cow position: chrX:23572374-23572000 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 14

Conread position: 212-590
Cow position: chrX:25459216-25458837 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 235

Conread position: 213-569
Cow position: chrX:39757456-39757812 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 233

Conread position: 214-568
Cow position: chrX:5070060-5069714 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 250, 12

Conread position: 216-542
Cow position: chrX:4329655-4329331 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 55

Conread position: 216-585
Cow position: chrX:9156745-9157116 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 11

Conread position: 216-586
Cow position: chrX:38963540-38963905 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 201

Conread position: 217-541
Cow position: chrX:26626268-26625937 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 218-540
Cow position: chrX:18488285-18487967 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 218-586
Cow position: chrX:45967605-45967958 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 55

Conread position: 218-590
Cow position: chrX:5406489-5406858 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 92

Conread position: 218-590
Cow position: chrX:18462546-18462175 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 220-586
Cow position: chrX:8483522-8483884 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 222-582
Cow position: chrX:19163201-19162841 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 35

Conread position: 223-585
Cow position: chrX:24588020-24587659 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 222

Conread position: 223-590
Cow position: chrX:16359575-16359215 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 223-590
Cow position: chrX:27997085-27997450 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 85

Conread position: 223-594
Cow position: chrX:41733760-41733384 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 8

Conread position: 225-363
Cow position: chrX:30544546-30544409 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 225-406
Cow position: chrX:28156971-28157151 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 154, 72

Conread position: 225-461
Cow position: chrX:16514811-16514574 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 225-541
Cow position: chrX:2701401-2701086 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 154, 286

Conread position: 225-542
Cow position: chrX:42499638-42499316 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 225-585
Cow position: chrX:2463260-2462908 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 134, 72

Conread position: 225-585
Cow position: chrX:18898213-18897856 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 20

Conread position: 225-585
Cow position: chrX:24482933-24482576 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 70

Conread position: 225-587
Cow position: chrX:13069307-13068941 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 54

Conread position: 225-587
Cow position: chrX:13089868-13089502 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 54

Conread position: 225-590
Cow position: chrX:23109200-23109559 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 123

Conread position: 225-590
Cow position: chrX:27590598-27590240 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 221

Conread position: 225-590
Cow position: chrX:43217827-43218195 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 139

Conread position: 225-597
Cow position: chrX:34564737-34565104 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 23

Conread position: 226-341
Cow position: chrX:7444372-7444487 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 226-344
Cow position: chrX:19657934-19658052 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 226-347
Cow position: chrX:20888172-20888051 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 226-354
Cow position: chrX:38935863-38935991 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 226-367
Cow position: chrX:4943773-4943631 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 226-370
Cow position: chrX:4177256-4177400 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 226-372
Cow position: chrX:25451759-25451905 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 80

Conread position: 226-372
Cow position: chrX:27616240-27616387 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 226-373
Cow position: chrX:39386994-39386847 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 226-376
Cow position: chrX:28879169-28879019 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 226-376
Cow position: chrX:32057462-32057311 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 226-377
Cow position: chrX:617011-616860 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 226-377
Cow position: chrX:31570483-31570635 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 226-378
Cow position: chrX:21390229-21390377 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 226-381
Cow position: chrX:2324143-2324295 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 226-381
Cow position: chrX:14263341-14263187 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 226-385
Cow position: chrX:44737694-44737533 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 226-388
Cow position: chrX:25946610-25946443 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 226-389
Cow position: chrX:21582879-21583043 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 0

Conread position: 226-397
Cow position: chrX:22819702-22819873 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 148, 165

Conread position: 226-397
Cow position: chrX:40384483-40384655 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 148, 0

Conread position: 226-400
Cow position: chrX:15486223-15486048 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 153, 0

Conread position: 226-413
Cow position: chrX:4482390-4482576 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 150, 46

Conread position: 226-418
Cow position: chrX:21255213-21255406 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 148, 0

Conread position: 226-419
Cow position: chrX:24231834-24231638 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 93

Conread position: 226-420
Cow position: chrX:9161183-9160988 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 153, 0

Conread position: 226-420
Cow position: chrX:45400603-45400408 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 135

Conread position: 226-428
Cow position: chrX:35260413-35260616 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 226-428
Cow position: chrX:40187413-40187618 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 226-428
Cow position: chrX:45464883-45465084 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 157, 111

Conread position: 226-438
Cow position: chrX:28558324-28558535 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 153, 86

Conread position: 226-439
Cow position: chrX:44802884-44803092 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 171

Conread position: 226-442
Cow position: chrX:39702288-39702497 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 151, 11

Conread position: 226-452
Cow position: chrX:29055356-29055577 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 155, 29

Conread position: 226-453
Cow position: chrX:5639500-5639273 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 215

Conread position: 226-466
Cow position: chrX:26508674-26508917 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 139, 0

Conread position: 226-486
Cow position: chrX:2648924-2648664 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 153, 98

Conread position: 226-495
Cow position: chrX:21625542-21625265 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 46

Conread position: 226-542
Cow position: chrX:8517041-8517357 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 143

Conread position: 226-542
Cow position: chrX:20131454-20131131 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 206

Conread position: 226-542
Cow position: chrX:35680781-35681084 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 144

Conread position: 226-542
Cow position: chrX:37781640-37781336 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 226-549
Cow position: chrX:33631591-33631916 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 146, 183

Conread position: 226-554
Cow position: chrX:6279169-6278852 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 82

Conread position: 226-558
Cow position: chrX:13785946-13785615 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 204

Conread position: 226-558
Cow position: chrX:25163217-25163559 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 103, 34

Conread position: 226-558
Cow position: chrX:28624323-28623994 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 208

Conread position: 226-558
Cow position: chrX:29602603-29602281 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 143

Conread position: 226-558
Cow position: chrX:33538364-33538694 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 71

Conread position: 226-559
Cow position: chrX:30688502-30688834 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 219

Conread position: 226-560
Cow position: chrX:13405860-13405531 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 17

Conread position: 226-560
Cow position: chrX:37066709-37067044 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 90

Conread position: 226-568
Cow position: chrX:17200224-17200581 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 226-569
Cow position: chrX:17631396-17631051 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 172

Conread position: 226-571
Cow position: chrX:24317504-24317847 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 69

Conread position: 226-576
Cow position: chrX:12724204-12724552 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 17

Conread position: 226-584
Cow position: chrX:10866430-10866073 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 226-584
Cow position: chrX:22600978-22600622 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 117

Conread position: 226-584
Cow position: chrX:23396044-23396400 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 69

Conread position: 226-585
Cow position: chrX:878927-878576 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 33

Conread position: 226-585
Cow position: chrX:3569879-3570246 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 212

Conread position: 226-585
Cow position: chrX:3649371-3649014 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 203

Conread position: 226-585
Cow position: chrX:7551366-7551000 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 227

Conread position: 226-585
Cow position: chrX:19437648-19437285 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 62

Conread position: 226-585
Cow position: chrX:31261199-31260835 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 226-585
Cow position: chrX:39546543-39546178 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 226-585
Cow position: chrX:40224808-40224448 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 221

Conread position: 226-586
Cow position: chrX:1499028-1499387 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 34

Conread position: 226-586
Cow position: chrX:3361258-3361615 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 191

Conread position: 226-586
Cow position: chrX:7695217-7695557 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 152

Conread position: 226-586
Cow position: chrX:14908449-14908812 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 15

Conread position: 226-586
Cow position: chrX:16465737-16466096 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-586
Cow position: chrX:31728900-31729254 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 79

Conread position: 226-586
Cow position: chrX:47211404-47211054 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 149

Conread position: 226-587
Cow position: chrX:2715059-2715419 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 219

Conread position: 226-587
Cow position: chrX:10932110-10932469 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-587
Cow position: chrX:20742424-20742783 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 118

Conread position: 226-587
Cow position: chrX:22888095-22888455 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 219

Conread position: 226-587
Cow position: chrX:29841732-29841372 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 203

Conread position: 226-587
Cow position: chrX:45236903-45237263 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-589
Cow position: chrX:11655520-11655885 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 50

Conread position: 226-589
Cow position: chrX:18244419-18244784 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 226

Conread position: 226-590
Cow position: chrX:2151495-2151132 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-590
Cow position: chrX:5306038-5306399 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-590
Cow position: chrX:10351298-10351661 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 219

Conread position: 226-590
Cow position: chrX:14162629-14162991 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 34

Conread position: 226-590
Cow position: chrX:14408013-14407650 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 191

Conread position: 226-590
Cow position: chrX:15114108-15114471 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 199

Conread position: 226-590
Cow position: chrX:20878325-20877963 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 124

Conread position: 226-590
Cow position: chrX:21833306-21833685 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 235

Conread position: 226-590
Cow position: chrX:22609155-22608792 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 219

Conread position: 226-590
Cow position: chrX:23280444-23280806 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 215

Conread position: 226-590
Cow position: chrX:24735381-24735738 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 143

Conread position: 226-590
Cow position: chrX:30163801-30163438 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 16

Conread position: 226-590
Cow position: chrX:31978404-31978046 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-590
Cow position: chrX:37134096-37133734 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 69

Conread position: 226-590
Cow position: chrX:37957934-37958297 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 219

Conread position: 226-590
Cow position: chrX:38151125-38151488 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 76

Conread position: 226-590
Cow position: chrX:46297097-46297460 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 226-593
Cow position: chrX:4996052-4996414 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 148

Conread position: 226-593
Cow position: chrX:6406783-6407146 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 125

Conread position: 226-593
Cow position: chrX:27498205-27498571 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 34

Conread position: 226-593
Cow position: chrX:27705030-27705396 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 226-594
Cow position: chrX:525116-525479 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 34

Conread position: 226-594
Cow position: chrX:3807840-3808212 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 153, 90

Conread position: 226-594
Cow position: chrX:10256705-10256340 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 191

Conread position: 226-594
Cow position: chrX:10416097-10415723 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 225

Conread position: 226-594
Cow position: chrX:11819801-11820161 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 123

Conread position: 226-594
Cow position: chrX:14884525-14884158 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 215

Conread position: 226-594
Cow position: chrX:15140111-15139740 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 143

Conread position: 226-594
Cow position: chrX:17743506-17743864 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 199

Conread position: 226-594
Cow position: chrX:35609425-35609790 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 26

Conread position: 226-594
Cow position: chrX:38072330-38071967 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 196

Conread position: 226-594
Cow position: chrX:40268913-40269280 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 196

Conread position: 226-594
Cow position: chrX:40827307-40826943 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 33

Conread position: 226-594
Cow position: chrX:44193003-44192639 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 30

Conread position: 226-594
Cow position: chrX:45413212-45412851 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 143

Conread position: 226-595
Cow position: chrX:35025248-35025606 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 34

Conread position: 226-597
Cow position: chrX:44874095-44873745 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 119, 26

Conread position: 226-598
Cow position: chrX:7571340-7571714 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 219

Conread position: 227-354
Cow position: chrX:42222350-42222223 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 227-356
Cow position: chrX:5018166-5018037 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 227-422
Cow position: chrX:4868997-4869192 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 147, 60

Conread position: 227-426
Cow position: chrX:5392137-5391937 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 19

Conread position: 227-560
Cow position: chrX:323353-323683 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 218

Conread position: 227-584
Cow position: chrX:28513511-28513866 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 217

Conread position: 227-585
Cow position: chrX:18222851-18223208 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-585
Cow position: chrX:27318669-27319011 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 103

Conread position: 227-585
Cow position: chrX:31814451-31814094 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 20

Conread position: 227-586
Cow position: chrX:2579857-2580195 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 147, 131

Conread position: 227-587
Cow position: chrX:10427978-10428336 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 214

Conread position: 227-587
Cow position: chrX:22568579-22568222 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 218

Conread position: 227-587
Cow position: chrX:26230078-26229712 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 227-590
Cow position: chrX:3417699-3417339 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 227-590
Cow position: chrX:5320281-5319917 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 217

Conread position: 227-590
Cow position: chrX:6870125-6869763 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:8529978-8530340 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 214

Conread position: 227-590
Cow position: chrX:9011765-9012127 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 227-590
Cow position: chrX:14801380-14801017 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 214

Conread position: 227-590
Cow position: chrX:15260181-15259819 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:15621094-15620732 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:16046585-16046949 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 219

Conread position: 227-590
Cow position: chrX:19022871-19022509 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:23135016-23135372 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 25

Conread position: 227-590
Cow position: chrX:24320834-24320475 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:24413468-24413830 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 190

Conread position: 227-590
Cow position: chrX:24447250-24447601 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:25289241-25288879 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 227-590
Cow position: chrX:26760130-26759769 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:26974348-26974710 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 218

Conread position: 227-590
Cow position: chrX:29760125-29760499 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 230

Conread position: 227-590
Cow position: chrX:29903180-29903542 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-590
Cow position: chrX:30053030-30052669 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 18

Conread position: 227-590
Cow position: chrX:37852577-37852935 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 218

Conread position: 227-590
Cow position: chrX:38330820-38331182 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 227-591
Cow position: chrX:27305367-27305727 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 227-591
Cow position: chrX:30196735-30197098 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 218

Conread position: 227-593
Cow position: chrX:4665180-4664814 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 246, 15

Conread position: 228-351
Cow position: chrX:15008880-15008757 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 228-377
Cow position: chrX:28608574-28608426 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 228-397
Cow position: chrX:40601558-40601728 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 146, 0

Conread position: 228-420
Cow position: chrX:4632581-4632394 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 151, 80

Conread position: 228-428
Cow position: chrX:30133868-30133668 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 151, 32

Conread position: 228-542
Cow position: chrX:37832033-37831716 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 93

Conread position: 228-571
Cow position: chrX:29876622-29876276 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 65, 32

Conread position: 228-583
Cow position: chrX:3405914-3405562 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 28

Conread position: 228-585
Cow position: chrX:41103231-41103583 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 13

Conread position: 228-590
Cow position: chrX:11566353-11566714 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 217

Conread position: 228-590
Cow position: chrX:14598285-14598645 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 197

Conread position: 228-590
Cow position: chrX:22811328-22811685 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 32

Conread position: 228-594
Cow position: chrX:12290177-12290539 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 26

Conread position: 228-594
Cow position: chrX:27443119-27442751 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 47

Conread position: 229-419
Cow position: chrX:12179115-12179306 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 135, 19

Conread position: 230-354
Cow position: chrX:1729421-1729297 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 230-370
Cow position: chrX:31372903-31373043 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 133

Conread position: 230-517
Cow position: chrX:10960100-10960389 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 19, 73

Conread position: 230-584
Cow position: chrX:27117404-27117758 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 205

Conread position: 230-585
Cow position: chrX:2479186-2478833 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 139

Conread position: 230-594
Cow position: chrX:27450609-27450217 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 13

Conread position: 231-350
Cow position: chrX:21495084-21495203 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 231-363
Cow position: chrX:26441818-26441686 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 231-370
Cow position: chrX:22578947-22578808 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 231-372
Cow position: chrX:30165231-30165093 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 231-377
Cow position: chrX:2500189-2500044 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 231-377
Cow position: chrX:29064855-29065001 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 15

Conread position: 231-385
Cow position: chrX:32010513-32010358 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 231-391
Cow position: chrX:34502388-34502552 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 89

Conread position: 231-392
Cow position: chrX:10146225-10146065 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 155, 138

Conread position: 231-396
Cow position: chrX:41082689-41082854 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 148, 46

Conread position: 231-397
Cow position: chrX:30421706-30421538 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 119, 0

Conread position: 231-399
Cow position: chrX:14990054-14989885 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 231-400
Cow position: chrX:29722658-29722824 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 148, 23

Conread position: 231-411
Cow position: chrX:31496178-31496359 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 9, 15

Conread position: 231-412
Cow position: chrX:43566895-43567077 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 92

Conread position: 231-419
Cow position: chrX:16290579-16290382 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 231-426
Cow position: chrX:44396392-44396583 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 11

Conread position: 231-436
Cow position: chrX:34663531-34663323 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 23

Conread position: 231-437
Cow position: chrX:45976001-45976208 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 63

Conread position: 231-438
Cow position: chrX:29083520-29083729 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 14

Conread position: 231-453
Cow position: chrX:8103861-8103643 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 9

Conread position: 231-483
Cow position: chrX:12996413-12996171 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 242, 29

Conread position: 231-506
Cow position: chrX:21595979-21596250 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 131, 100

Conread position: 231-513
Cow position: chrX:37118339-37118625 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 124

Conread position: 231-540
Cow position: chrX:33589579-33589886 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 66

Conread position: 231-541
Cow position: chrX:17663477-17663164 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 231-541
Cow position: chrX:24366510-24366202 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 67

Conread position: 231-542
Cow position: chrX:9911332-9911018 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 152, 138

Conread position: 231-542
Cow position: chrX:23414946-23414633 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 193

Conread position: 231-542
Cow position: chrX:25816814-25816506 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 23

Conread position: 231-553
Cow position: chrX:11855611-11855929 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 200

Conread position: 231-558
Cow position: chrX:7424868-7425196 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 111

Conread position: 231-558
Cow position: chrX:13058000-13058330 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 166

Conread position: 231-558
Cow position: chrX:21501060-21501389 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 161

Conread position: 231-560
Cow position: chrX:33827607-33827264 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 136, 245

Conread position: 231-568
Cow position: chrX:22603996-22603661 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 100

Conread position: 231-570
Cow position: chrX:4750930-4750599 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 213

Conread position: 231-584
Cow position: chrX:36513903-36514247 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 216

Conread position: 231-585
Cow position: chrX:9898899-9898546 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 161

Conread position: 231-585
Cow position: chrX:12309944-12309594 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 185

Conread position: 231-585
Cow position: chrX:14819156-14819507 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 50

Conread position: 231-585
Cow position: chrX:15120443-15120094 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 27

Conread position: 231-585
Cow position: chrX:26755187-26754837 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 208

Conread position: 231-585
Cow position: chrX:27422839-27422486 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-585
Cow position: chrX:29049422-29049765 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 29

Conread position: 231-585
Cow position: chrX:29849190-29848836 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 215

Conread position: 231-585
Cow position: chrX:36794436-36794789 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 214

Conread position: 231-585
Cow position: chrX:38051990-38051637 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 198

Conread position: 231-585
Cow position: chrX:39292301-39291948 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 214

Conread position: 231-585
Cow position: chrX:39560210-39559857 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-585
Cow position: chrX:40545180-40544813 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 218

Conread position: 231-586
Cow position: chrX:9169172-9168818 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-586
Cow position: chrX:10915480-10915834 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 210

Conread position: 231-586
Cow position: chrX:15173082-15172735 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-586
Cow position: chrX:21226916-21227268 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 214

Conread position: 231-586
Cow position: chrX:28024705-28025059 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 214

Conread position: 231-586
Cow position: chrX:28559392-28559041 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-586
Cow position: chrX:35409116-35409464 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 143

Conread position: 231-586
Cow position: chrX:41192131-41192483 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 208

Conread position: 231-587
Cow position: chrX:2486188-2485834 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 175

Conread position: 231-587
Cow position: chrX:8782186-8782541 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 214

Conread position: 231-587
Cow position: chrX:16078108-16078466 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 160

Conread position: 231-587
Cow position: chrX:20654012-20654377 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 134, 110

Conread position: 231-587
Cow position: chrX:38140598-38140239 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 139, 280

Conread position: 231-587
Cow position: chrX:38227651-38227293 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 202

Conread position: 231-587
Cow position: chrX:39713993-39714346 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 174

Conread position: 231-587
Cow position: chrX:42733308-42733662 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 140, 200

Conread position: 231-590
Cow position: chrX:2103847-2104205 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 231-590
Cow position: chrX:2274359-2274717 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:7096900-7097257 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:7677413-7677768 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 47

Conread position: 231-590
Cow position: chrX:7755343-7755701 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:8590975-8591340 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 147

Conread position: 231-590
Cow position: chrX:13971797-13971427 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:15439195-15438849 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:16040239-16039880 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 74, 215

Conread position: 231-590
Cow position: chrX:18656363-18656005 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:21343836-21344194 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 231-590
Cow position: chrX:23986691-23987044 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 82

Conread position: 231-590
Cow position: chrX:24173723-24173369 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 191

Conread position: 231-590
Cow position: chrX:27446137-27446488 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 143

Conread position: 231-590
Cow position: chrX:28542451-28542082 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 58

Conread position: 231-590
Cow position: chrX:47000209-46999864 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 148, 64

Conread position: 231-593
Cow position: chrX:18950294-18949942 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 24

Conread position: 231-594
Cow position: chrX:151347-151705 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 21

Conread position: 231-594
Cow position: chrX:1810718-1810358 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 210

Conread position: 231-594
Cow position: chrX:3654050-3654408 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 97

Conread position: 231-594
Cow position: chrX:11083168-11082810 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 129

Conread position: 231-594
Cow position: chrX:17497538-17497900 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 214

Conread position: 231-594
Cow position: chrX:24424956-24424584 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 231-594
Cow position: chrX:28633034-28632676 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 231-594
Cow position: chrX:28866542-28866189 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 120

Conread position: 231-594
Cow position: chrX:32871344-32870982 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 197

Conread position: 231-594
Cow position: chrX:35268338-35268694 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 25

Conread position: 231-594
Cow position: chrX:35388466-35388103 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 231-594
Cow position: chrX:36250422-36250058 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 138

Conread position: 231-594
Cow position: chrX:37071849-37072209 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 28

Conread position: 231-594
Cow position: chrX:41122512-41122875 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 200

Conread position: 231-594
Cow position: chrX:42086305-42086665 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 143

Conread position: 231-594
Cow position: chrX:42462308-42461942 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 231-597
Cow position: chrX:45042997-45043365 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 194

Conread position: 231-598
Cow position: chrX:34222193-34222556 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 171

Conread position: 231-771
Cow position: chrX:26749437-26748888 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 139

Conread position: 232-353
Cow position: chrX:20707937-20708057 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 232-365
Cow position: chrX:16688711-16688844 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 232-488
Cow position: chrX:36202835-36203085 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 142, 51

Conread position: 232-535
Cow position: chrX:20953975-20954268 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 21

Conread position: 232-540
Cow position: chrX:23987986-23988284 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 20

Conread position: 232-541
Cow position: chrX:41527069-41526771 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 32, 163

Conread position: 232-568
Cow position: chrX:35937623-35937294 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 43

Conread position: 232-586
Cow position: chrX:22812505-22812858 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 197

Conread position: 232-594
Cow position: chrX:18293382-18293735 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 230, 110

Conread position: 232-598
Cow position: chrX:17891982-17892351 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 217

Conread position: 233-376
Cow position: chrX:8795920-8796060 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 233-400
Cow position: chrX:21060917-21061084 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 125

Conread position: 233-410
Cow position: chrX:16020940-16020763 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 146, 65

Conread position: 233-483
Cow position: chrX:15993839-15994089 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 148, 24

Conread position: 233-521
Cow position: chrX:40279253-40279534 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 146, 62

Conread position: 233-531
Cow position: chrX:3145447-3145746 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 33

Conread position: 233-533
Cow position: chrX:11073764-11073465 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 233-541
Cow position: chrX:21815610-21815917 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 146, 89

Conread position: 233-542
Cow position: chrX:6695904-6695596 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 23

Conread position: 233-542
Cow position: chrX:9953559-9953870 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 189

Conread position: 233-542
Cow position: chrX:17122595-17122284 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 137

Conread position: 233-558
Cow position: chrX:13889280-13889601 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 154, 129

Conread position: 233-558
Cow position: chrX:15038368-15038035 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 233-558
Cow position: chrX:24309671-24309355 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 42

Conread position: 233-560
Cow position: chrX:1977937-1978264 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 146, 107

Conread position: 233-560
Cow position: chrX:6835817-6835490 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 143, 44

Conread position: 233-560
Cow position: chrX:9854717-9855050 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 233-567
Cow position: chrX:13430018-13429697 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 229, 136

Conread position: 233-569
Cow position: chrX:20734089-20734425 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 146, 136

Conread position: 233-570
Cow position: chrX:17610015-17609680 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 40

Conread position: 233-585
Cow position: chrX:27323415-27323072 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 239, 30

Conread position: 233-590
Cow position: chrX:12465939-12466295 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 198

Conread position: 233-590
Cow position: chrX:16703115-16703470 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 136

Conread position: 233-594
Cow position: chrX:35288100-35288464 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 234-370
Cow position: chrX:32584487-32584351 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 234-428
Cow position: chrX:45421554-45421359 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 138, 75

Conread position: 234-585
Cow position: chrX:24280382-24280730 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 234-586
Cow position: chrX:33803572-33803217 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 34

Conread position: 235-420
Cow position: chrX:24202471-24202658 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 235-438
Cow position: chrX:22771687-22771482 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 137, 19

Conread position: 235-442
Cow position: chrX:9227635-9227427 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 235-444
Cow position: chrX:42010480-42010689 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 143, 175

Conread position: 235-503
Cow position: chrX:37364168-37364430 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 137, 20

Conread position: 235-575
Cow position: chrX:41790992-41790655 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 175

Conread position: 236-594
Cow position: chrX:22449361-22449722 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 238-594
Cow position: chrX:9299397-9299040 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 141, 5

Conread position: 240-472
Cow position: chrX:27395548-27395315 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 139, 0

Conread position: 240-593
Cow position: chrX:47380019-47379664 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 45

Conread position: 241-342
Cow position: chrX:16527938-16528038 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 241-354
Cow position: chrX:25569044-25568932 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 241-447
Cow position: chrX:11614146-11614354 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 241-532
Cow position: chrX:32329476-32329760 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 135, 75

Conread position: 241-589
Cow position: chrX:40121551-40121216 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 162

Conread position: 241-590
Cow position: chrX:14122299-14121952 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 176

Conread position: 241-593
Cow position: chrX:10412517-10412183 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 12

Conread position: 242-388
Cow position: chrX:18288011-18287865 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 137, 127

Conread position: 242-416
Cow position: chrX:22139791-22139615 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 242-542
Cow position: chrX:17265594-17265297 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 137, 67

Conread position: 242-542
Cow position: chrX:25282037-25281735 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 137, 208

Conread position: 242-562
Cow position: chrX:19878488-19878807 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 12

Conread position: 242-571
Cow position: chrX:18799831-18799500 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 182, 24

Conread position: 242-571
Cow position: chrX:43408452-43408783 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 132

Conread position: 242-586
Cow position: chrX:43648303-43647948 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 56

Conread position: 242-595
Cow position: chrX:1331389-1331738 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 130

Conread position: 243-377
Cow position: chrX:14901614-14901480 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 123, 114

Conread position: 243-575
Cow position: chrX:7277387-7277711 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 127

Conread position: 244-536
Cow position: chrX:32623016-32623308 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 112, 85

Conread position: 244-550
Cow position: chrX:40788606-40788917 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 134, 15

Conread position: 244-590
Cow position: chrX:30940636-30940981 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 201

Conread position: 244-594
Cow position: chrX:44930095-44930438 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 203

Conread position: 245-532
Cow position: chrX:18988917-18989205 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 134, 119

Conread position: 245-538
Cow position: chrX:8518528-8518820 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 112, 189

Conread position: 245-585
Cow position: chrX:27240192-27240533 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 206, 57

Conread position: 245-590
Cow position: chrX:31605140-31605484 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 200

Conread position: 245-590
Cow position: chrX:42120759-42121103 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 200

Conread position: 245-594
Cow position: chrX:10440385-10440035 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 138, 84

Conread position: 245-835
Cow position: chrX:34797490-34798076 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 191
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 129, 200

Conread position: 246-428
Cow position: chrX:14924494-14924676 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 16

Conread position: 246-540
Cow position: chrX:32182579-32182284 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 181

Conread position: 246-585
Cow position: chrX:1550407-1550745 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 14

Conread position: 246-586
Cow position: chrX:20976605-20976266 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 133, 16

Conread position: 247-542
Cow position: chrX:45992705-45992999 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 45

Conread position: 247-590
Cow position: chrX:22522373-22522031 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 198

Conread position: 248-385
Cow position: chrX:31373058-31373194 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 248-397
Cow position: chrX:46721538-46721386 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 248-442
Cow position: chrX:40559804-40559609 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 0

Conread position: 248-542
Cow position: chrX:3582651-3582946 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 121

Conread position: 248-542
Cow position: chrX:23969816-23970107 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 181

Conread position: 248-560
Cow position: chrX:41067295-41067607 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 248-575
Cow position: chrX:2146773-2147100 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 248-576
Cow position: chrX:37760311-37760650 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 315

Conread position: 248-585
Cow position: chrX:502125-501791 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 191

Conread position: 248-585
Cow position: chrX:13178005-13177670 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 9

Conread position: 248-586
Cow position: chrX:10583450-10583108 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 9

Conread position: 248-590
Cow position: chrX:32144703-32144363 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 102

Conread position: 248-593
Cow position: chrX:47368790-47368446 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 180

Conread position: 248-594
Cow position: chrX:3653234-3653567 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 220, 12

Conread position: 248-594
Cow position: chrX:22115825-22115478 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 81

Conread position: 248-594
Cow position: chrX:24105087-24105430 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 95

Conread position: 248-594
Cow position: chrX:46533061-46532707 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 183

Conread position: 248-595
Cow position: chrX:45373824-45373487 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 131, 197

Conread position: 248-597
Cow position: chrX:45430563-45430210 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 29

Conread position: 248-599
Cow position: chrX:21765058-21765411 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 122

Conread position: 249-354
Cow position: chrX:125953-126058 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 249-584
Cow position: chrX:39316646-39316318 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 210, 97

Conread position: 249-587
Cow position: chrX:39698787-39699123 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 169

Conread position: 249-594
Cow position: chrX:45113094-45113432 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 198

Conread position: 250-521
Cow position: chrX:39125771-39126048 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 5

Conread position: 250-540
Cow position: chrX:22901204-22900912 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 201

Conread position: 250-542
Cow position: chrX:20675567-20675849 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 250-584
Cow position: chrX:3223587-3223255 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 129, 110

Conread position: 250-584
Cow position: chrX:31777974-31777646 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 211
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 198, 109

Conread position: 251-426
Cow position: chrX:19333683-19333507 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 251-426
Cow position: chrX:21459143-21458967 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 123, 0

Conread position: 251-549
Cow position: chrX:28993685-28993389 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 193
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 222, 69

Conread position: 251-662
Cow position: chrX:3596605-3596195 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 194

Conread position: 254-558
Cow position: chrX:35847681-35847981 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 115

Conread position: 256-454
Cow position: chrX:24174222-24174022 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 115

Conread position: 257-389
Cow position: chrX:17889154-17889021 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 257-542
Cow position: chrX:48310917-48310631 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 236

Conread position: 257-594
Cow position: chrX:4123304-4123638 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 46

Conread position: 259-585
Cow position: chrX:16345389-16345717 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 119, 101

Conread position: 259-585
Cow position: chrX:19595735-19596068 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 7

Conread position: 259-585
Cow position: chrX:27105418-27105091 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 198, 20

Conread position: 259-586
Cow position: chrX:26878132-26878463 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 85, 7

Conread position: 259-593
Cow position: chrX:23515004-23514668 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 38

Conread position: 260-518
Cow position: chrX:38642491-38642750 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 117, 190

Conread position: 260-541
Cow position: chrX:3471193-3471475 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 123, 172

Conread position: 260-541
Cow position: chrX:37949252-37949540 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 113

Conread position: 260-560
Cow position: chrX:16733279-16732981 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 284, 0

Conread position: 260-575
Cow position: chrX:24006353-24006038 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 68

Conread position: 260-576
Cow position: chrX:158362-158048 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 15

Conread position: 260-585
Cow position: chrX:13138745-13138419 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 15

Conread position: 260-585
Cow position: chrX:20340418-20340096 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 260-593
Cow position: chrX:33003723-33004059 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 67

Conread position: 260-594
Cow position: chrX:1518977-1518635 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 176

Conread position: 260-594
Cow position: chrX:15007680-15007347 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 163

Conread position: 260-594
Cow position: chrX:23932760-23932435 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 161

Conread position: 260-594
Cow position: chrX:41106549-41106205 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 218
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 100

Conread position: 260-594
Cow position: chrX:45200421-45200084 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 212, 123

Conread position: 261-418
Cow position: chrX:30085781-30085622 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 261-541
Cow position: chrX:5277446-5277168 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 190, 173

Conread position: 261-559
Cow position: chrX:25205176-25205477 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 63, 77

Conread position: 261-570
Cow position: chrX:19400296-19400610 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 198

Conread position: 261-571
Cow position: chrX:20957487-20957799 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 243

Conread position: 261-583
Cow position: chrX:12853033-12852716 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 14

Conread position: 261-585
Cow position: chrX:33822570-33822896 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 179, 245

Conread position: 262-542
Cow position: chrX:13359864-13360142 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 234

Conread position: 262-585
Cow position: chrX:12008207-12007887 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 32

Conread position: 263-540
Cow position: chrX:729394-729117 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 120, 46

Conread position: 263-571
Cow position: chrX:24788237-24787935 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 112

Conread position: 263-585
Cow position: chrX:37105643-37105968 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 209
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 168

Conread position: 263-590
Cow position: chrX:6566548-6566874 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 178

Conread position: 263-590
Cow position: chrX:15531678-15531355 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 166

Conread position: 263-590
Cow position: chrX:16074062-16074376 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 162

Conread position: 263-593
Cow position: chrX:508684-508351 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 13

Conread position: 263-594
Cow position: chrX:41049581-41049919 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 116, 165

Conread position: 264-531
Cow position: chrX:41304268-41304001 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 115, 128

Conread position: 264-597
Cow position: chrX:9651571-9651240 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 166

Conread position: 265-590
Cow position: chrX:42591201-42591525 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 176

Conread position: 265-590
Cow position: chrX:48423411-48423735 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 180

Conread position: 266-366
Cow position: chrX:1185622-1185722 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 266-461
Cow position: chrX:23908698-23908504 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 113, 173

Conread position: 266-539
Cow position: chrX:42531018-42530738 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 266-542
Cow position: chrX:29031856-29032134 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 10

Conread position: 266-542
Cow position: chrX:44961190-44961462 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 179

Conread position: 266-560
Cow position: chrX:4415327-4415618 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 65

Conread position: 266-585
Cow position: chrX:17965039-17964727 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 140

Conread position: 266-585
Cow position: chrX:22772132-22772450 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 179

Conread position: 266-585
Cow position: chrX:25039059-25039379 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 114, 87

Conread position: 266-585
Cow position: chrX:40717417-40717738 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 137

Conread position: 266-590
Cow position: chrX:2418006-2417684 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 267-431
Cow position: chrX:31435805-31435970 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 0

Conread position: 269-426
Cow position: chrX:38584207-38584365 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 269-586
Cow position: chrX:26844988-26845308 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 38

Conread position: 269-594
Cow position: chrX:31949449-31949127 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 81

Conread position: 269-594
Cow position: chrX:42470456-42470133 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 53

Conread position: 270-594
Cow position: chrX:40481389-40481068 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 160

Conread position: 271-586
Cow position: chrX:27749527-27749213 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 174

Conread position: 272-561
Cow position: chrX:36294617-36294903 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 89

Conread position: 272-585
Cow position: chrX:3154776-3154451 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 163

Conread position: 272-587
Cow position: chrX:20383054-20382743 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 151

Conread position: 272-590
Cow position: chrX:29780228-29780545 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 159

Conread position: 272-594
Cow position: chrX:19636395-19636714 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 190, 102

Conread position: 273-587
Cow position: chrX:42459656-42459977 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 172

Conread position: 273-590
Cow position: chrX:25277015-25276699 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 172

Conread position: 274-596
Cow position: chrX:32743030-32743344 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 198, 99

Conread position: 275-399
Cow position: chrX:15836187-15836063 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 60

Conread position: 276-590
Cow position: chrX:30981681-30981365 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 143

Conread position: 277-541
Cow position: chrX:41754205-41754468 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 26

Conread position: 278-594
Cow position: chrX:43789368-43789055 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 203
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 62

Conread position: 279-598
Cow position: chrX:23268698-23268378 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 92

Conread position: 280-420
Cow position: chrX:20544614-20544473 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 280-428
Cow position: chrX:41238827-41238681 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 99, 57

Conread position: 280-541
Cow position: chrX:18684270-18684530 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 152

Conread position: 281-589
Cow position: chrX:30093872-30093567 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 166

Conread position: 281-589
Cow position: chrX:38548899-38549212 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 166

Conread position: 281-590
Cow position: chrX:3157110-3157418 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 164

Conread position: 281-594
Cow position: chrX:42994115-42994418 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 47

Conread position: 283-541
Cow position: chrX:35441039-35441299 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 283-587
Cow position: chrX:529292-529600 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 146

Conread position: 284-586
Cow position: chrX:14133972-14134272 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 18

Conread position: 284-595
Cow position: chrX:17082914-17082602 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 92, 54

Conread position: 285-506
Cow position: chrX:30833932-30833709 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 17

Conread position: 285-586
Cow position: chrX:3161517-3161220 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 138, 84

Conread position: 285-587
Cow position: chrX:22077824-22078124 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 285-594
Cow position: chrX:5871813-5872117 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 89

Conread position: 285-594
Cow position: chrX:25925057-25924733 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 168

Conread position: 286-540
Cow position: chrX:38934751-38935002 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 146

Conread position: 286-540
Cow position: chrX:38940873-38941124 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 146

Conread position: 286-585
Cow position: chrX:34238218-34238516 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 93, 17

Conread position: 286-590
Cow position: chrX:3387603-3387906 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 143

Conread position: 286-594
Cow position: chrX:2351559-2351866 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 142

Conread position: 287-418
Cow position: chrX:7381758-7381891 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 287-573
Cow position: chrX:8869887-8869601 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 89, 136

Conread position: 287-585
Cow position: chrX:45786628-45786925 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 61

Conread position: 288-420
Cow position: chrX:40790031-40789900 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 118

Conread position: 288-540
Cow position: chrX:13030142-13029894 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 91, 159

Conread position: 288-542
Cow position: chrX:31745998-31745748 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 160

Conread position: 288-558
Cow position: chrX:12980848-12980583 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 91, 143

Conread position: 288-584
Cow position: chrX:35223802-35224096 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 288-595
Cow position: chrX:27105757-27106063 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 157

Conread position: 288-595
Cow position: chrX:34754693-34754387 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 157

Conread position: 289-442
Cow position: chrX:31251766-31251919 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 130
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 12

Conread position: 289-585
Cow position: chrX:12691159-12690864 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 156

Conread position: 289-590
Cow position: chrX:15232132-15231828 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 289-590
Cow position: chrX:47317906-47318206 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 150

Conread position: 290-585
Cow position: chrX:12437730-12437444 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 7

Conread position: 291-442
Cow position: chrX:18215433-18215586 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 291-568
Cow position: chrX:37572666-37572942 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 87, 154

Conread position: 291-594
Cow position: chrX:34532033-34532331 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 88, 154

Conread position: 294-583
Cow position: chrX:15591107-15591398 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 66

Conread position: 294-585
Cow position: chrX:32094946-32094655 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 55

Conread position: 295-542
Cow position: chrX:16790311-16790074 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 79, 128

Conread position: 295-570
Cow position: chrX:43980251-43980531 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 84, 231

Conread position: 295-594
Cow position: chrX:9252665-9252374 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 74

Conread position: 295-594
Cow position: chrX:12115547-12115842 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 128

Conread position: 295-594
Cow position: chrX:21862164-21861869 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 84, 144

Conread position: 296-416
Cow position: chrX:11844857-11844737 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 83, 41

Conread position: 296-540
Cow position: chrX:38840357-38840603 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 14

Conread position: 296-590
Cow position: chrX:24969309-24969016 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 149

Conread position: 296-594
Cow position: chrX:13648277-13647980 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 149

Conread position: 297-593
Cow position: chrX:626533-626242 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 35

Conread position: 298-585
Cow position: chrX:29864922-29864636 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 147

Conread position: 298-590
Cow position: chrX:5599469-5599178 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 76, 147

Conread position: 300-542
Cow position: chrX:47243794-47243554 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 128

Conread position: 300-568
Cow position: chrX:13266319-13266046 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 302-542
Cow position: chrX:11455554-11455320 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 115

Conread position: 303-442
Cow position: chrX:777028-777169 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 303-543
Cow position: chrX:25425647-25425888 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 223

Conread position: 303-568
Cow position: chrX:26728369-26728630 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 71, 142

Conread position: 303-586
Cow position: chrX:22330063-22329773 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 212

Conread position: 306-438
Cow position: chrX:18551423-18551556 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 306-541
Cow position: chrX:38705078-38705316 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 110

Conread position: 306-594
Cow position: chrX:18695408-18695116 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 63

Conread position: 306-594
Cow position: chrX:27516054-27516335 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 174, 22

Conread position: 309-438
Cow position: chrX:29859427-29859297 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 309-568
Cow position: chrX:31385237-31385493 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 105

Conread position: 309-585
Cow position: chrX:37403503-37403228 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 136

Conread position: 309-590
Cow position: chrX:43510936-43511219 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 136

Conread position: 309-594
Cow position: chrX:14974218-14973931 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 230

Conread position: 309-594
Cow position: chrX:15596572-15596841 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 93

Conread position: 310-542
Cow position: chrX:42381908-42381679 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 62, 99

Conread position: 310-560
Cow position: chrX:16284463-16284207 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 7, 254

Conread position: 311-584
Cow position: chrX:28666453-28666176 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 61

Conread position: 311-585
Cow position: chrX:16713719-16713992 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 134

Conread position: 311-587
Cow position: chrX:44086826-44087101 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 63, 117

Conread position: 311-589
Cow position: chrX:24193639-24193908 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 33

Conread position: 312-585
Cow position: chrX:27760864-27761135 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 160, 106

Conread position: 312-590
Cow position: chrX:36219059-36219329 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 57

Conread position: 313-583
Cow position: chrX:13049926-13049654 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 15

Conread position: 313-594
Cow position: chrX:17794517-17794789 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 134

Conread position: 314-527
Cow position: chrX:33799423-33799628 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 38

Conread position: 314-585
Cow position: chrX:16706324-16706597 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 117

Conread position: 314-585
Cow position: chrX:47654829-47655099 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 127

Conread position: 314-598
Cow position: chrX:13868230-13868501 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 148, 55

Conread position: 315-594
Cow position: chrX:48243925-48243648 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 54

Conread position: 316-572
Cow position: chrX:41306107-41305847 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 63, 117

Conread position: 318-542
Cow position: chrX:22623981-22624205 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 116

Conread position: 318-590
Cow position: chrX:1781432-1781705 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 131

Conread position: 319-590
Cow position: chrX:40180341-40180071 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 53, 129

Conread position: 320-590
Cow position: chrX:28058263-28057995 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 49

Conread position: 321-553
Cow position: chrX:24260081-24259847 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 129

Conread position: 321-590
Cow position: chrX:23299487-23299754 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 125

Conread position: 322-541
Cow position: chrX:32128461-32128246 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 109

Conread position: 322-594
Cow position: chrX:47965466-47965181 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 85

Conread position: 323-585
Cow position: chrX:18118938-18118677 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 5, 13

Conread position: 324-557
Cow position: chrX:27679886-27680128 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 326-524
Cow position: chrX:42281934-42282135 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 332-586
Cow position: chrX:24200738-24200988 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 87

Conread position: 332-590
Cow position: chrX:2945327-2945068 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 114

Conread position: 333-595
Cow position: chrX:45501688-45501953 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 119

Conread position: 334-590
Cow position: chrX:6652526-6652272 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 45, 35

Conread position: 335-554
Cow position: chrX:27070321-27070105 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 138, 39

Conread position: 337-542
Cow position: chrX:19019555-19019343 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 105

Conread position: 337-556
Cow position: chrX:45566156-45566374 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 36

Conread position: 337-585
Cow position: chrX:917829-917574 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 337-585
Cow position: chrX:27019753-27019998 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 93

Conread position: 337-585
Cow position: chrX:42530358-42530116 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 37, 32

Conread position: 337-590
Cow position: chrX:7311541-7311793 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 108

Conread position: 337-590
Cow position: chrX:7444632-7444884 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 110

Conread position: 337-590
Cow position: chrX:11663726-11663978 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 110

Conread position: 337-590
Cow position: chrX:11672329-11672581 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 110

Conread position: 337-590
Cow position: chrX:16222174-16222425 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 110

Conread position: 337-590
Cow position: chrX:27626903-27627155 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 108

Conread position: 337-590
Cow position: chrX:28555887-28555635 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 110

Conread position: 337-590
Cow position: chrX:34285516-34285263 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 108

Conread position: 337-590
Cow position: chrX:34413324-34413576 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 42, 110

Conread position: 337-594
Cow position: chrX:8899573-8899827 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 94

Conread position: 337-666
Cow position: chrX:24288365-24288036 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 86

Conread position: 338-594
Cow position: chrX:38094976-38094722 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 91

Conread position: 339-542
Cow position: chrX:3130116-3130313 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 71

Conread position: 339-587
Cow position: chrX:1947171-1946924 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 92

Conread position: 340-594
Cow position: chrX:19210844-19210593 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 17

Conread position: 341-585
Cow position: chrX:42222016-42221773 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 87

Conread position: 341-590
Cow position: chrX:13686270-13686515 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 15

Conread position: 341-594
Cow position: chrX:38067160-38066910 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 5

Conread position: 342-539
Cow position: chrX:10438098-10437904 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 81

Conread position: 342-584
Cow position: chrX:28133902-28134140 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 91

Conread position: 342-586
Cow position: chrX:160486-160237 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 342-590
Cow position: chrX:5017851-5017608 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 32

Conread position: 343-542
Cow position: chrX:1729021-1728819 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 17

Conread position: 343-590
Cow position: chrX:23139867-23140110 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 104

Conread position: 343-594
Cow position: chrX:42171745-42171496 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 27

Conread position: 344-594
Cow position: chrX:21666036-21665790 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 87

Conread position: 344-594
Cow position: chrX:23564242-23563993 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 85

Conread position: 345-587
Cow position: chrX:13396695-13396455 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 35

Conread position: 346-560
Cow position: chrX:41884879-41884670 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 81

Conread position: 346-585
Cow position: chrX:38936249-38936496 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 23

Conread position: 347-594
Cow position: chrX:28847324-28847075 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 348-521
Cow position: chrX:16416027-16416195 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 26

Conread position: 348-540
Cow position: chrX:4044299-4044111 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 75

Conread position: 349-590
Cow position: chrX:13384967-13385207 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 98

Conread position: 349-590
Cow position: chrX:47607973-47608214 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 99

Conread position: 350-586
Cow position: chrX:7742896-7742661 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 95

Conread position: 350-594
Cow position: chrX:37231972-37232213 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 97

Conread position: 351-585
Cow position: chrX:40515467-40515695 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 45

Conread position: 353-585
Cow position: chrX:16530485-16530721 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 88

Conread position: 353-590
Cow position: chrX:13447834-13448070 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 94

Conread position: 353-590
Cow position: chrX:24809406-24809170 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 92

Conread position: 353-594
Cow position: chrX:12096682-12096444 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 92

Conread position: 360-586
Cow position: chrX:20321196-20320971 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 80

Conread position: 360-587
Cow position: chrX:11975915-11975690 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 65

Conread position: 360-587
Cow position: chrX:17980166-17980392 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 87

Conread position: 360-590
Cow position: chrX:46579284-46579055 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 87

Conread position: 360-594
Cow position: chrX:26441209-26440976 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 74

Conread position: 361-587
Cow position: chrX:19674221-19674445 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 8

Conread position: 363-590
Cow position: chrX:3079013-3078787 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 82

Conread position: 365-569
Cow position: chrX:6654740-6654537 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 149

Conread position: 365-590
Cow position: chrX:1616481-1616248 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 365-590
Cow position: chrX:23047356-23047580 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 82

Conread position: 365-591
Cow position: chrX:22284084-22284318 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 365-594
Cow position: chrX:10916324-10916558 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 365-594
Cow position: chrX:15486049-15485824 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 66

Conread position: 365-594
Cow position: chrX:22325648-22325881 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 76

Conread position: 365-594
Cow position: chrX:38967227-38967453 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 14, 58

Conread position: 365-594
Cow position: chrX:48370671-48370900 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 66

Conread position: 365-597
Cow position: chrX:14599112-14599336 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 84

Conread position: 366-556
Cow position: chrX:32419767-32419952 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 64

Conread position: 366-585
Cow position: chrX:25966625-25966851 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 369-584
Cow position: chrX:30134908-30134692 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 76

Conread position: 369-590
Cow position: chrX:19495380-19495160 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 78

Conread position: 370-590
Cow position: chrX:36373126-36373344 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 373-590
Cow position: chrX:32010616-32010831 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 71

Conread position: 373-590
Cow position: chrX:38442547-38442762 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 73

Conread position: 374-590
Cow position: chrX:45467635-45467419 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 71

Conread position: 374-594
Cow position: chrX:11581523-11581738 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 167, 56

Conread position: 374-594
Cow position: chrX:19772035-19771824 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 57

Conread position: 375-590
Cow position: chrX:10495820-10496033 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 69

Conread position: 375-590
Cow position: chrX:21495345-21495558 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 98, 55

Conread position: 375-594
Cow position: chrX:39556228-39556013 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 15

Conread position: 379-585
Cow position: chrX:34376545-34376752 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 65

Conread position: 379-590
Cow position: chrX:828471-828691 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 161

Conread position: 379-595
Cow position: chrX:30543696-30543482 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 26

Conread position: 380-584
Cow position: chrX:20710782-20710984 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 48

Conread position: 380-594
Cow position: chrX:8796843-8797051 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 167, 66

Conread position: 383-528
Cow position: chrX:14901390-14901245 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 73

Conread position: 383-585
Cow position: chrX:15147586-15147391 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 61

Conread position: 383-585
Cow position: chrX:25452145-25452344 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 61

Conread position: 383-585
Cow position: chrX:39174618-39174418 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 45

Conread position: 383-594
Cow position: chrX:38577127-38577336 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 38

Conread position: 383-595
Cow position: chrX:48224593-48224381 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 46

Conread position: 384-585
Cow position: chrX:7054136-7053941 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 46

Conread position: 385-580
Cow position: chrX:43730593-43730402 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 46

Conread position: 386-584
Cow position: chrX:12810712-12810914 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 47

Conread position: 386-587
Cow position: chrX:2499741-2499543 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 19

Conread position: 386-587
Cow position: chrX:12776388-12776189 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 60

Conread position: 386-587
Cow position: chrX:15590274-15590075 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 58

Conread position: 386-590
Cow position: chrX:24102577-24102779 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 58

Conread position: 386-590
Cow position: chrX:44557677-44557879 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 38

Conread position: 386-594
Cow position: chrX:10831914-10831708 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 89, 35

Conread position: 386-594
Cow position: chrX:20888046-20887841 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 36

Conread position: 387-587
Cow position: chrX:19196919-19196721 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 57

Conread position: 387-590
Cow position: chrX:9593536-9593335 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 57

Conread position: 387-594
Cow position: chrX:22821013-22821217 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 57

Conread position: 387-594
Cow position: chrX:23583157-23583361 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 57

Conread position: 388-560
Cow position: chrX:37205313-37205486 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 388-587
Cow position: chrX:14134781-14134978 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 58

Conread position: 388-590
Cow position: chrX:2362099-2362299 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 58

Conread position: 388-590
Cow position: chrX:10992218-10992418 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 58

Conread position: 388-590
Cow position: chrX:15504891-15505091 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 85, 56

Conread position: 388-590
Cow position: chrX:34006913-34007113 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 58

Conread position: 388-591
Cow position: chrX:48247237-48247031 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 34

Conread position: 389-586
Cow position: chrX:38668039-38667837 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 389-587
Cow position: chrX:21749857-21749662 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 55

Conread position: 389-590
Cow position: chrX:126386-126592 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 391-585
Cow position: chrX:40602567-40602759 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 36

Conread position: 391-590
Cow position: chrX:20617194-20616997 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 55

Conread position: 392-584
Cow position: chrX:29723055-29723245 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 29

Conread position: 394-585
Cow position: chrX:23024309-23024498 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 50

Conread position: 394-585
Cow position: chrX:32584205-32584018 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 34

Conread position: 394-590
Cow position: chrX:5112950-5112756 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 50

Conread position: 394-590
Cow position: chrX:15561209-15561015 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 79, 50

Conread position: 394-590
Cow position: chrX:43199038-43199235 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 22

Conread position: 395-585
Cow position: chrX:5856911-5856717 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 395-585
Cow position: chrX:32309701-32309901 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 395-590
Cow position: chrX:25741507-25741314 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 49

Conread position: 395-594
Cow position: chrX:32978650-32978453 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 27

Conread position: 396-597
Cow position: chrX:42508035-42507840 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 18

Conread position: 397-594
Cow position: chrX:42247566-42247380 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 33

Conread position: 398-585
Cow position: chrX:25946232-25946042 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 75, 46

Conread position: 398-594
Cow position: chrX:38218328-38218518 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 32

Conread position: 400-555
Cow position: chrX:39700825-39700980 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 40

Conread position: 400-594
Cow position: chrX:2300537-2300737 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 401-590
Cow position: chrX:34095174-34095361 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 45

Conread position: 401-595
Cow position: chrX:32188746-32188554 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 43

Conread position: 404-594
Cow position: chrX:31373194-31373377 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 18

Conread position: 405-594
Cow position: chrX:7718469-7718658 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 44

Conread position: 405-594
Cow position: chrX:16722200-16721998 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 41

Conread position: 405-594
Cow position: chrX:17271679-17271485 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 25

Conread position: 408-585
Cow position: chrX:7178528-7178704 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 65, 24

Conread position: 409-585
Cow position: chrX:25035765-25035592 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 35

Conread position: 409-594
Cow position: chrX:6658990-6659177 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 95

Conread position: 414-594
Cow position: chrX:20697980-20697805 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 20

Conread position: 415-585
Cow position: chrX:48205291-48205118 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 27

Conread position: 415-586
Cow position: chrX:15545522-15545693 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 22

Conread position: 425-597
Cow position: chrX:11614352-11614528 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 430-590
Cow position: chrX:11860607-11860442 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 431-587
Cow position: chrX:20038581-20038421 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 432-586
Cow position: chrX:34502561-34502716 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 432-586
Cow position: chrX:48490246-48490091 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 432-587
Cow position: chrX:19290410-19290569 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 432-593
Cow position: chrX:30141687-30141522 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 432-594
Cow position: chrX:40648304-40648466 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 151

Conread position: 432-594
Cow position: chrX:41743551-41743716 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 154

Conread position: 433-590
Cow position: chrX:5118844-5118685 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 433-593
Cow position: chrX:16289923-16289759 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 438-585
Cow position: chrX:9096310-9096462 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 438-590
Cow position: chrX:39731155-39731313 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 440-585
Cow position: chrX:39386619-39386471 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 440-594
Cow position: chrX:45945279-45945433 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 150

Conread position: 441-585
Cow position: chrX:27982498-27982351 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 141

Conread position: 441-586
Cow position: chrX:11718131-11717984 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 103, 28

Conread position: 441-593
Cow position: chrX:7381971-7382126 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 67

Conread position: 441-593
Cow position: chrX:37843367-37843523 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 442-586
Cow position: chrX:11844590-11844445 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 444-590
Cow position: chrX:30863550-30863399 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 444-590
Cow position: chrX:36240044-36240195 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 449-584
Cow position: chrX:18999553-18999692 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 449-586
Cow position: chrX:29048688-29048825 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 449-590
Cow position: chrX:21255692-21255837 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 449-594
Cow position: chrX:32747313-32747462 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 450-587
Cow position: chrX:20954260-20954401 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 451-594
Cow position: chrX:31443163-31443018 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 63

Conread position: 457-587
Cow position: chrX:23215770-23215904 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:7509800-7509937 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:14008990-14008853 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:23235493-23235630 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:24758034-24757897 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:24966932-24967069 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:29877518-29877381 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:30538489-30538352 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:30899725-30899587 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:30950191-30950328 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:34333537-34333400 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:35803477-35803614 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:36479595-36479732 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:36820569-36820432 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:37497784-37497647 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:39954875-39954738 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:43767874-43767737 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:48165186-48165323 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 457-590
Cow position: chrX:48328724-48328587 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 460-585
Cow position: chrX:26754119-26753990 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 462-594
Cow position: chrX:8103425-8103289 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 465-590
Cow position: chrX:29844804-29844676 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 469-590
Cow position: chrX:27469978-27469854 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 469-594
Cow position: chrX:10306349-10306474 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 473-594
Cow position: chrX:33205312-33205189 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 119

Conread position: 474-587
Cow position: chrX:27458936-27459052 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 474-590
Cow position: chrX:3658373-3658254 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 474-590
Cow position: chrX:15008751-15008632 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 474-594
Cow position: chrX:14924681-14924804 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 478-594
Cow position: chrX:7350987-7351103 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 479-594
Cow position: chrX:616717-616602 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 480-593
Cow position: chrX:42855098-42855211 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 481-594
Cow position: chrX:20376658-20376770 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 0

Show alignments to all cow chromosomes.