Cow genome map

Conread name: Ss1.1-Pig4-TMW8064J03.5

Conread position: 2-467
Cow position: chr10:2083990-2084458 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 107

Conread position: 616-828
Cow position: chr10:42451379-42451170 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 71

Conread position: 617-828
Cow position: chr10:16093086-16093296 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 6

Conread position: 622-828
Cow position: chr10:30369941-30369736 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 21

Conread position: 623-822
Cow position: chr10:6198902-6199099 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 624-819
Cow position: chr10:33084551-33084363 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 17

Conread position: 625-818
Cow position: chr10:15309516-15309326 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 18

Conread position: 625-820
Cow position: chr10:7816992-7817186 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 625-828
Cow position: chr10:13315822-13316025 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 18

Conread position: 625-828
Cow position: chr10:24447747-24447955 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 55

Conread position: 627-820
Cow position: chr10:53405366-53405551 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 628-822
Cow position: chr10:973032-973213 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 23

Conread position: 630-820
Cow position: chr10:13391158-13390969 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 11

Conread position: 630-825
Cow position: chr10:53973739-53973925 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 635-823
Cow position: chr10:8449395-8449586 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 637-826
Cow position: chr10:54819162-54819350 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 120

Conread position: 639-823
Cow position: chr10:69997903-69997719 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 116

Conread position: 639-828
Cow position: chr10:31400996-31400812 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 39

Conread position: 640-819
Cow position: chr10:19191661-19191831 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 17, 9

Conread position: 640-823
Cow position: chr10:13765264-13765083 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 640-826
Cow position: chr10:34655212-34655024 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 640-828
Cow position: chr10:28776251-28776437 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 640-828
Cow position: chr10:37818656-37818469 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 54, 101

Conread position: 640-828
Cow position: chr10:46327589-46327777 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 642-819
Cow position: chr10:6852166-6852340 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 51

Conread position: 642-828
Cow position: chr10:37768204-37768391 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 37

Conread position: 643-781
Cow position: chr10:22520260-22520122 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 643-796
Cow position: chr10:27119063-27118914 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 114

Conread position: 643-811
Cow position: chr10:24781091-24781258 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 643-813
Cow position: chr10:20553086-20553256 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 20

Conread position: 643-818
Cow position: chr10:22888912-22888738 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 139, 0

Conread position: 643-818
Cow position: chr10:41941673-41941488 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 45

Conread position: 643-818
Cow position: chr10:47773633-47773804 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 643-819
Cow position: chr10:10720769-10720595 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 643-819
Cow position: chr10:23056175-23056000 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 643-819
Cow position: chr10:23583666-23583493 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 643-819
Cow position: chr10:30352751-30352930 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 109

Conread position: 643-819
Cow position: chr10:38014269-38014443 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 20

Conread position: 643-819
Cow position: chr10:54504509-54504682 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 643-819
Cow position: chr10:67288195-67288368 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 643-820
Cow position: chr10:6543626-6543804 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 53

Conread position: 643-820
Cow position: chr10:23576447-23576624 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 50

Conread position: 643-820
Cow position: chr10:37415691-37415868 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 643-822
Cow position: chr10:62353367-62353539 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 148, 41

Conread position: 643-823
Cow position: chr10:2613270-2613448 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 43, 49

Conread position: 643-823
Cow position: chr10:3362518-3362708 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 643-823
Cow position: chr10:3364281-3364101 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 88, 64

Conread position: 643-823
Cow position: chr10:16645285-16645108 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 45

Conread position: 643-826
Cow position: chr10:25260157-25260332 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 20

Conread position: 643-826
Cow position: chr10:42230693-42230877 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 46

Conread position: 643-826
Cow position: chr10:45624246-45624072 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 32

Conread position: 643-826
Cow position: chr10:51944262-51944446 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 58

Conread position: 643-826
Cow position: chr10:55396074-55395892 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 20

Conread position: 643-828
Cow position: chr10:10134888-10135074 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 36

Conread position: 643-828
Cow position: chr10:10148558-10148735 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 643-828
Cow position: chr10:14947165-14947340 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 643-828
Cow position: chr10:15462393-15462589 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 50

Conread position: 643-828
Cow position: chr10:17022660-17022480 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 643-828
Cow position: chr10:19372434-19372250 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 643-828
Cow position: chr10:23506587-23506405 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 50, 113

Conread position: 643-828
Cow position: chr10:29252069-29252250 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 109, 0

Conread position: 643-828
Cow position: chr10:30224588-30224768 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 56

Conread position: 643-828
Cow position: chr10:30360422-30360605 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 643-828
Cow position: chr10:30523161-30522975 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 172, 0

Conread position: 643-828
Cow position: chr10:31027742-31027556 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 21

Conread position: 643-828
Cow position: chr10:35778998-35778815 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 643-828
Cow position: chr10:37529362-37529179 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 643-828
Cow position: chr10:40164032-40163847 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 643-828
Cow position: chr10:47690292-47690474 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 643-828
Cow position: chr10:52296398-52296581 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 105

Conread position: 643-828
Cow position: chr10:52695825-52695640 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 643-828
Cow position: chr10:58451468-58451288 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 643-828
Cow position: chr10:60446636-60446819 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 105, 34

Conread position: 643-828
Cow position: chr10:61510037-61509857 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 643-828
Cow position: chr10:61922237-61922057 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 51

Conread position: 644-823
Cow position: chr10:35791835-35792007 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 644-823
Cow position: chr10:48407040-48407218 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 171, 0

Conread position: 644-823
Cow position: chr10:48573777-48573598 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 50, 40

Conread position: 644-828
Cow position: chr10:5151247-5151432 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 31, 130

Conread position: 644-828
Cow position: chr10:11966940-11966762 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 644-828
Cow position: chr10:22390495-22390683 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 644-828
Cow position: chr10:33215705-33215882 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 138

Conread position: 644-828
Cow position: chr10:45370959-45371142 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 110, 0

Conread position: 644-828
Cow position: chr10:50559022-50558838 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 69

Conread position: 645-776
Cow position: chr10:30216802-30216671 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 59

Conread position: 645-787
Cow position: chr10:1427942-1428085 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 46

Conread position: 645-819
Cow position: chr10:41760417-41760244 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 77, 46

Conread position: 645-820
Cow position: chr10:11080867-11081042 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 645-820
Cow position: chr10:56828413-56828239 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 34

Conread position: 645-822
Cow position: chr10:8923183-8923360 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 645-823
Cow position: chr10:7383705-7383532 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 645-826
Cow position: chr10:62286459-62286641 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 645-828
Cow position: chr10:35731617-35731441 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 645-828
Cow position: chr10:37668252-37668070 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 49

Conread position: 646-819
Cow position: chr10:23390410-23390234 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 35

Conread position: 648-805
Cow position: chr10:54469486-54469330 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 648-818
Cow position: chr10:6489778-6489948 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 37

Conread position: 648-819
Cow position: chr10:39228054-39228225 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 141
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 648-819
Cow position: chr10:44421998-44421828 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 648-821
Cow position: chr10:6719801-6719978 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 44

Conread position: 648-822
Cow position: chr10:31362305-31362134 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 648-823
Cow position: chr10:627896-628066 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 648-823
Cow position: chr10:22527995-22527820 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 17

Conread position: 648-823
Cow position: chr10:31534639-31534817 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 648-823
Cow position: chr10:39875241-39875072 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 648-823
Cow position: chr10:41802990-41802811 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 37

Conread position: 648-823
Cow position: chr10:47651205-47651380 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 50

Conread position: 648-823
Cow position: chr10:49947973-49947799 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 648-826
Cow position: chr10:34646540-34646362 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 40

Conread position: 648-826
Cow position: chr10:57142309-57142131 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 648-828
Cow position: chr10:17073456-17073278 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 162, 36

Conread position: 648-828
Cow position: chr10:60491350-60491180 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 649-828
Cow position: chr10:28395394-28395215 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 14

Conread position: 650-812
Cow position: chr10:38725569-38725725 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 27

Conread position: 650-828
Cow position: chr10:22633714-22633539 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 651-813
Cow position: chr10:50609451-50609618 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 29

Conread position: 651-817
Cow position: chr10:6505264-6505427 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 651-817
Cow position: chr10:37068505-37068341 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 98

Conread position: 651-818
Cow position: chr10:59571813-59571978 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 651-820
Cow position: chr10:10750341-10750172 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 651-820
Cow position: chr10:15115525-15115693 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 40

Conread position: 651-820
Cow position: chr10:21657335-21657499 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 96

Conread position: 651-820
Cow position: chr10:23936394-23936555 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 651-820
Cow position: chr10:27828236-27828400 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 651-820
Cow position: chr10:28840864-28841036 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 49

Conread position: 651-820
Cow position: chr10:52827678-52827520 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 651-823
Cow position: chr10:20095667-20095846 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 651-823
Cow position: chr10:24763391-24763564 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 124

Conread position: 651-823
Cow position: chr10:58044219-58044047 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 29

Conread position: 651-828
Cow position: chr10:1978757-1978585 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 651-828
Cow position: chr10:6384445-6384617 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 651-828
Cow position: chr10:9675548-9675377 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 651-828
Cow position: chr10:15817881-15817708 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 33

Conread position: 651-828
Cow position: chr10:24929651-24929826 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 133

Conread position: 651-828
Cow position: chr10:33117039-33116865 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 651-828
Cow position: chr10:37913277-37913101 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 40

Conread position: 651-828
Cow position: chr10:51862166-51861992 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 652-823
Cow position: chr10:17293522-17293350 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 652-828
Cow position: chr10:762825-763000 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 652-828
Cow position: chr10:21422247-21422075 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 104

Conread position: 653-819
Cow position: chr10:43586374-43586207 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 42

Conread position: 653-823
Cow position: chr10:46195698-46195864 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 653-826
Cow position: chr10:29380047-29379874 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 102

Conread position: 653-828
Cow position: chr10:8093404-8093231 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 139, 25

Conread position: 653-828
Cow position: chr10:23346390-23346217 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 653-828
Cow position: chr10:51696654-51696827 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 28

Conread position: 653-828
Cow position: chr10:53674737-53674912 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 655-802
Cow position: chr10:6252583-6252436 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 29

Conread position: 655-823
Cow position: chr10:11213028-11213193 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 70

Conread position: 655-826
Cow position: chr10:45769957-45770128 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 139

Conread position: 655-828
Cow position: chr10:15424969-15425136 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 21

Conread position: 655-828
Cow position: chr10:24022368-24022197 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 655-828
Cow position: chr10:31803567-31803395 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 658-752
Cow position: chr10:55580358-55580263 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 658-827
Cow position: chr10:57786254-57786424 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 114

Conread position: 658-828
Cow position: chr10:6665636-6665472 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 36

Conread position: 660-819
Cow position: chr10:35868097-35867941 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 38

Conread position: 660-828
Cow position: chr10:41676492-41676324 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 19

Conread position: 662-819
Cow position: chr10:28152458-28152302 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 0

Conread position: 664-828
Cow position: chr10:2535491-2535656 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 117

Conread position: 670-828
Cow position: chr10:36947264-36947106 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 14

Conread position: 673-828
Cow position: chr10:40744047-40744199 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 676-820
Cow position: chr10:31400106-31400252 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 679-812
Cow position: chr10:49146453-49146586 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 5

Conread position: 680-828
Cow position: chr10:11047260-11047118 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 681-820
Cow position: chr10:6242570-6242435 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 681-828
Cow position: chr10:2185289-2185433 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 684-820
Cow position: chr10:5739334-5739200 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 684-820
Cow position: chr10:31116618-31116752 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 684-828
Cow position: chr10:24756354-24756498 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 684-828
Cow position: chr10:24903042-24902898 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 684-828
Cow position: chr10:30929947-30929798 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 684-828
Cow position: chr10:49253309-49253449 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 684-828
Cow position: chr10:52278667-52278811 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 40

Conread position: 685-826
Cow position: chr10:25822302-25822159 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 100

Conread position: 685-828
Cow position: chr10:17149823-17149966 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 685-828
Cow position: chr10:37295729-37295586 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 685-828
Cow position: chr10:49060773-49060631 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 686-823
Cow position: chr10:37426189-37426052 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 686-823
Cow position: chr10:38995174-38995311 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 5

Conread position: 686-827
Cow position: chr10:705051-704910 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 65

Conread position: 688-827
Cow position: chr10:9576102-9575963 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 688-828
Cow position: chr10:10120139-10120280 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 688-828
Cow position: chr10:34661377-34661239 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 690-828
Cow position: chr10:29349560-29349700 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 691-806
Cow position: chr10:37645010-37645124 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 691-819
Cow position: chr10:60697674-60697549 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 691-820
Cow position: chr10:6530135-6530264 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 691-828
Cow position: chr10:77322-77457 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 691-828
Cow position: chr10:2694914-2695048 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 691-828
Cow position: chr10:4151488-4151625 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 691-828
Cow position: chr10:46886106-46886239 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 691-828
Cow position: chr10:60960884-60961021 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 60

Conread position: 692-823
Cow position: chr10:55600206-55600076 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 692-828
Cow position: chr10:10634169-10634305 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 692-828
Cow position: chr10:30613777-30613913 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 692-828
Cow position: chr10:53076064-53076200 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 693-823
Cow position: chr10:23311076-23310947 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 693-823
Cow position: chr10:54848733-54848859 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 693-828
Cow position: chr10:33665794-33665929 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 695-823
Cow position: chr10:49634020-49634148 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 695-823
Cow position: chr10:49923420-49923292 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 698-828
Cow position: chr10:7835630-7835506 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 699-828
Cow position: chr10:2857006-2857133 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 699-828
Cow position: chr10:32503384-32503513 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 699-828
Cow position: chr10:34175020-34174891 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 703-827
Cow position: chr10:38205749-38205625 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 711-828
Cow position: chr10:27178465-27178578 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 719-823
Cow position: chr10:59417258-59417154 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 722-827
Cow position: chr10:25192959-25193064 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.