Cow genome map

Conread name: Ss1.1-Pig4-TMW8064J03.5

Conread position: 537-823
Cow position: chr14:16834541-16834259 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 30

Conread position: 572-828
Cow position: chr14:19827285-19827551 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 21

Conread position: 612-828
Cow position: chr14:24945340-24945560 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 25

Conread position: 617-828
Cow position: chr14:9308374-9308162 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 46

Conread position: 622-828
Cow position: chr14:33751671-33751470 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 623-828
Cow position: chr14:16524611-16524397 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 61

Conread position: 629-828
Cow position: chr14:15054864-15055059 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 31

Conread position: 641-819
Cow position: chr14:19959618-19959793 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 641-828
Cow position: chr14:16549887-16550071 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 643-813
Cow position: chr14:5633823-5633998 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 49

Conread position: 643-818
Cow position: chr14:24416999-24416819 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 15

Conread position: 643-819
Cow position: chr14:15492711-15492534 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 36

Conread position: 643-819
Cow position: chr14:26442225-26442399 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 113

Conread position: 643-819
Cow position: chr14:42154849-42155030 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 133

Conread position: 643-820
Cow position: chr14:10693144-10693314 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 42

Conread position: 643-820
Cow position: chr14:15997647-15997825 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 37

Conread position: 643-823
Cow position: chr14:19372456-19372276 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 643-825
Cow position: chr14:33300817-33300639 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 643-826
Cow position: chr14:8750190-8750011 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 107

Conread position: 643-826
Cow position: chr14:33791301-33791126 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 643-828
Cow position: chr14:4282393-4282574 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 643-828
Cow position: chr14:4877117-4877297 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 169, 40

Conread position: 643-828
Cow position: chr14:10078384-10078200 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 643-828
Cow position: chr14:13042871-13042690 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 643-828
Cow position: chr14:19863318-19863502 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 33

Conread position: 643-828
Cow position: chr14:20640512-20640697 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 107

Conread position: 643-828
Cow position: chr14:26433125-26433310 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 48

Conread position: 643-828
Cow position: chr14:28115071-28115254 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 36

Conread position: 643-828
Cow position: chr14:33309392-33309571 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 643-828
Cow position: chr14:39778870-39778684 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 643-828
Cow position: chr14:41210970-41210786 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 34

Conread position: 643-828
Cow position: chr14:48838710-48838527 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 644-823
Cow position: chr14:49824507-49824682 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 645-820
Cow position: chr14:39774936-39775110 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 39

Conread position: 645-828
Cow position: chr14:19189155-19188975 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 645-828
Cow position: chr14:19618638-19618818 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 645-828
Cow position: chr14:33714564-33714741 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 648-799
Cow position: chr14:19939236-19939086 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 648-810
Cow position: chr14:42480109-42480267 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 648-826
Cow position: chr14:41486150-41486325 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 107, 0

Conread position: 648-828
Cow position: chr14:1646082-1646252 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 150, 27

Conread position: 648-828
Cow position: chr14:22989144-22988966 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 650-828
Cow position: chr14:25228246-25228076 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 651-773
Cow position: chr14:15260918-15260796 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 651-796
Cow position: chr14:2345176-2345031 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 651-817
Cow position: chr14:10631016-10631176 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 651-819
Cow position: chr14:23682373-23682203 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 651-819
Cow position: chr14:27591847-27592015 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 31

Conread position: 651-819
Cow position: chr14:45677339-45677171 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 77

Conread position: 651-820
Cow position: chr14:5557012-5557181 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 651-823
Cow position: chr14:19360002-19359825 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 651-823
Cow position: chr14:29698249-29698424 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 109, 52

Conread position: 651-823
Cow position: chr14:39770126-39770290 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 27

Conread position: 651-823
Cow position: chr14:48427180-48427011 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 651-828
Cow position: chr14:16256875-16256691 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 0

Conread position: 651-828
Cow position: chr14:25225838-25225660 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 651-828
Cow position: chr14:48773011-48772837 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 652-823
Cow position: chr14:16760508-16760336 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 65

Conread position: 652-828
Cow position: chr14:41749655-41749827 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 653-795
Cow position: chr14:3162833-3162692 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 653-803
Cow position: chr14:24796327-24796476 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 29

Conread position: 653-828
Cow position: chr14:18345625-18345796 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 32

Conread position: 655-823
Cow position: chr14:7636392-7636562 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 35

Conread position: 655-823
Cow position: chr14:41837769-41837935 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 656-823
Cow position: chr14:47170252-47170416 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 658-823
Cow position: chr14:37131755-37131599 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 660-819
Cow position: chr14:35018653-35018812 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 32

Conread position: 665-820
Cow position: chr14:25334152-25333999 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 665-828
Cow position: chr14:11643161-11643317 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 27

Conread position: 665-828
Cow position: chr14:20110627-20110790 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 665-828
Cow position: chr14:21933247-21933411 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 28

Conread position: 668-799
Cow position: chr14:41325355-41325486 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 670-828
Cow position: chr14:10852120-10851963 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 111, 65

Conread position: 672-828
Cow position: chr14:13731010-13731168 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 678-828
Cow position: chr14:45577009-45577160 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 679-828
Cow position: chr14:13846064-13845918 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 679-828
Cow position: chr14:16457597-16457452 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 680-823
Cow position: chr14:2833325-2833468 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 680-828
Cow position: chr14:34096487-34096633 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 75

Conread position: 681-825
Cow position: chr14:34083082-34083231 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 13

Conread position: 681-828
Cow position: chr14:20826569-20826423 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 682-828
Cow position: chr14:29734286-29734432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 684-822
Cow position: chr14:27791623-27791481 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 684-823
Cow position: chr14:2038731-2038871 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 684-828
Cow position: chr14:12924378-12924231 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 116

Conread position: 684-828
Cow position: chr14:19487369-19487227 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 684-828
Cow position: chr14:25903607-25903463 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 685-828
Cow position: chr14:20600461-20600317 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 9

Conread position: 687-820
Cow position: chr14:33644030-33643900 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 687-828
Cow position: chr14:11975663-11975800 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 688-828
Cow position: chr14:12033169-12033302 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 688-828
Cow position: chr14:36254624-36254764 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 689-819
Cow position: chr14:8784267-8784142 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 691-818
Cow position: chr14:38338065-38338191 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 691-828
Cow position: chr14:4848416-4848280 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 691-828
Cow position: chr14:34199774-34199911 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 695-823
Cow position: chr14:18302026-18301897 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 110
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 109, 0

Conread position: 697-819
Cow position: chr14:10706938-10706817 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 702-828
Cow position: chr14:2981613-2981737 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 703-828
Cow position: chr14:15469925-15470048 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 706-820
Cow position: chr14:40287646-40287532 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.