Cow genome map

Conread name: Ss1.1-Pig4-TMW8064J03.5

Conread position: 611-828
Cow position: chr24:28042844-28043061 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 26

Conread position: 614-819
Cow position: chr24:13947999-13948197 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 23

Conread position: 621-828
Cow position: chr24:18614880-18615086 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 21

Conread position: 622-820
Cow position: chr24:6912482-6912286 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 15

Conread position: 639-823
Cow position: chr24:43967602-43967423 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 60, 45

Conread position: 639-828
Cow position: chr24:14457824-14457639 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 640-820
Cow position: chr24:27349279-27349099 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 9

Conread position: 640-823
Cow position: chr24:23187021-23186838 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 640-826
Cow position: chr24:13352938-13353123 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 38

Conread position: 640-828
Cow position: chr24:37650571-37650753 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 51

Conread position: 643-776
Cow position: chr24:6487820-6487950 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 643-819
Cow position: chr24:43832426-43832605 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 76

Conread position: 643-820
Cow position: chr24:5141847-5142020 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 643-820
Cow position: chr24:27726112-27725934 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 643-820
Cow position: chr24:37037800-37037980 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 643-820
Cow position: chr24:43536855-43537030 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 643-822
Cow position: chr24:30314126-30313947 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 25

Conread position: 643-823
Cow position: chr24:17860358-17860177 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 643-823
Cow position: chr24:30235770-30235951 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 40, 116

Conread position: 643-823
Cow position: chr24:30308654-30308477 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 152

Conread position: 643-826
Cow position: chr24:211888-212071 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 643-826
Cow position: chr24:3165719-3165902 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 643-826
Cow position: chr24:24755346-24755531 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 643-826
Cow position: chr24:29063751-29063575 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 643-826
Cow position: chr24:30897635-30897454 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 160, 0

Conread position: 643-826
Cow position: chr24:35675448-35675630 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 153, 20

Conread position: 643-826
Cow position: chr24:43927423-43927249 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 643-828
Cow position: chr24:10499115-10499300 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 123

Conread position: 643-828
Cow position: chr24:15057304-15057481 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 643-828
Cow position: chr24:15246741-15246557 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 17

Conread position: 643-828
Cow position: chr24:24491115-24490932 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 643-828
Cow position: chr24:24662227-24662045 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 643-828
Cow position: chr24:25885258-25885073 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 125

Conread position: 643-828
Cow position: chr24:27608198-27608020 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 135

Conread position: 643-828
Cow position: chr24:28062855-28063033 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 118, 20

Conread position: 643-828
Cow position: chr24:28233952-28234128 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 643-828
Cow position: chr24:28496680-28496496 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 20

Conread position: 643-828
Cow position: chr24:29673423-29673607 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 42

Conread position: 643-828
Cow position: chr24:31359227-31359406 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 643-828
Cow position: chr24:37975078-37974895 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 15

Conread position: 643-828
Cow position: chr24:39791442-39791627 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 643-828
Cow position: chr24:39849984-39849803 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 643-828
Cow position: chr24:43364263-43364444 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 644-823
Cow position: chr24:32095222-32095388 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 644-824
Cow position: chr24:37823432-37823609 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 35

Conread position: 644-828
Cow position: chr24:2402464-2402282 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 644-828
Cow position: chr24:20807439-20807620 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 644-828
Cow position: chr24:20874584-20874767 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 50

Conread position: 644-828
Cow position: chr24:29561672-29561487 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 645-820
Cow position: chr24:230181-230361 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 645-820
Cow position: chr24:3430638-3430811 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 645-828
Cow position: chr24:1269697-1269869 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 645-828
Cow position: chr24:28319307-28319123 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 647-819
Cow position: chr24:11887065-11887234 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 647-826
Cow position: chr24:116648-116475 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 647-826
Cow position: chr24:44869914-44870088 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 648-808
Cow position: chr24:45004853-45005013 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 10

Conread position: 648-818
Cow position: chr24:31816484-31816654 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 648-820
Cow position: chr24:27713499-27713327 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 648-820
Cow position: chr24:39483385-39483554 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 648-828
Cow position: chr24:20364502-20364324 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 648-828
Cow position: chr24:33153684-33153862 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 143, 43

Conread position: 648-828
Cow position: chr24:33372466-33372639 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 172, 36

Conread position: 650-828
Cow position: chr24:24250638-24250808 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 51

Conread position: 651-818
Cow position: chr24:201729-201561 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 651-819
Cow position: chr24:6131964-6131795 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 108

Conread position: 651-819
Cow position: chr24:19736424-19736257 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 50

Conread position: 651-819
Cow position: chr24:33222031-33221855 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 651-819
Cow position: chr24:43028419-43028253 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 47

Conread position: 651-820
Cow position: chr24:15288731-15288905 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 651-820
Cow position: chr24:31812098-31812267 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 651-823
Cow position: chr24:175586-175414 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 130

Conread position: 651-828
Cow position: chr24:5754747-5754921 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 29

Conread position: 651-828
Cow position: chr24:18357143-18356966 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 7

Conread position: 651-828
Cow position: chr24:28990473-28990647 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 652-828
Cow position: chr24:27284732-27284902 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 653-820
Cow position: chr24:36404231-36404066 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 26

Conread position: 653-826
Cow position: chr24:28303454-28303271 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 653-828
Cow position: chr24:17311306-17311136 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 657-826
Cow position: chr24:18442644-18442475 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 21

Conread position: 658-806
Cow position: chr24:44145497-44145642 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 658-828
Cow position: chr24:27844612-27844442 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 21

Conread position: 663-828
Cow position: chr24:18474806-18474643 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 664-828
Cow position: chr24:27824382-27824548 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 673-826
Cow position: chr24:27740128-27740279 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 681-823
Cow position: chr24:33244335-33244476 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 684-828
Cow position: chr24:5360659-5360802 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 71

Conread position: 684-828
Cow position: chr24:11007402-11007542 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 685-826
Cow position: chr24:6723710-6723852 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 685-827
Cow position: chr24:27748583-27748725 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 686-828
Cow position: chr24:28344330-28344477 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 5

Conread position: 687-817
Cow position: chr24:37651670-37651800 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 688-828
Cow position: chr24:21835014-21834872 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 688-828
Cow position: chr24:23694959-23694815 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 6

Conread position: 688-828
Cow position: chr24:34742698-34742839 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 691-828
Cow position: chr24:17375587-17375724 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 691-828
Cow position: chr24:42981810-42981676 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 692-820
Cow position: chr24:15373355-15373483 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 692-828
Cow position: chr24:22133121-22133257 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 694-826
Cow position: chr24:18732150-18732018 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 695-820
Cow position: chr24:40983084-40983208 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 695-825
Cow position: chr24:28689620-28689751 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 6

Conread position: 698-823
Cow position: chr24:42687804-42687926 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 710-823
Cow position: chr24:29539961-29539849 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.