Cow genome map

Conread name: Ss1.1-Pig4-TMW8064J03.5

Conread position: 562-826
Cow position: chr29:23155073-23155332 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 92

Conread position: 612-828
Cow position: chr29:29324518-29324318 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 618-779
Cow position: chr29:31477216-31477054 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 41

Conread position: 618-823
Cow position: chr29:18085469-18085675 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 622-828
Cow position: chr29:5892740-5892953 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 21

Conread position: 622-828
Cow position: chr29:7624076-7624286 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 39

Conread position: 625-818
Cow position: chr29:5186589-5186395 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 625-820
Cow position: chr29:18012461-18012658 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 627-823
Cow position: chr29:41530755-41530952 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 67

Conread position: 628-819
Cow position: chr29:1325352-1325538 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 13

Conread position: 635-820
Cow position: chr29:27826439-27826620 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 44

Conread position: 638-828
Cow position: chr29:25737497-25737306 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 639-828
Cow position: chr29:34687753-34687943 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 32

Conread position: 640-820
Cow position: chr29:11053936-11053760 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 14

Conread position: 641-828
Cow position: chr29:13028361-13028548 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 105

Conread position: 643-779
Cow position: chr29:24103619-24103482 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 20

Conread position: 643-802
Cow position: chr29:44682173-44682022 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 643-819
Cow position: chr29:12680084-12680255 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 643-819
Cow position: chr29:26615796-26615618 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 147, 41

Conread position: 643-820
Cow position: chr29:9709621-9709795 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 31

Conread position: 643-820
Cow position: chr29:22613352-22613527 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 160

Conread position: 643-820
Cow position: chr29:23220576-23220401 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 136, 0

Conread position: 643-820
Cow position: chr29:24578784-24578963 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 643-820
Cow position: chr29:27329818-27329992 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 643-823
Cow position: chr29:23243954-23243775 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 643-823
Cow position: chr29:43099821-43099643 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 20

Conread position: 643-825
Cow position: chr29:43009156-43008979 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 39

Conread position: 643-826
Cow position: chr29:12626053-12625870 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 643-827
Cow position: chr29:1556857-1557038 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 643-827
Cow position: chr29:4480246-4480066 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 11

Conread position: 643-828
Cow position: chr29:1614851-1615037 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 81

Conread position: 643-828
Cow position: chr29:4002813-4003000 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 43

Conread position: 643-828
Cow position: chr29:19949227-19949415 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 118

Conread position: 643-828
Cow position: chr29:22029032-22028847 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 33, 115

Conread position: 643-828
Cow position: chr29:25092038-25092214 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 19

Conread position: 643-828
Cow position: chr29:28840079-28840264 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 643-828
Cow position: chr29:29769425-29769243 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 130, 35

Conread position: 643-828
Cow position: chr29:34773808-34773628 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 42

Conread position: 643-828
Cow position: chr29:39111389-39111207 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 139

Conread position: 643-828
Cow position: chr29:41112949-41112773 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 644-819
Cow position: chr29:26778805-26778981 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 100

Conread position: 644-820
Cow position: chr29:20770270-20770444 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 111

Conread position: 644-820
Cow position: chr29:27588848-27589023 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 644-826
Cow position: chr29:29314728-29314542 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 173

Conread position: 644-828
Cow position: chr29:17607342-17607524 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 154, 0

Conread position: 645-820
Cow position: chr29:22162325-22162149 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 645-828
Cow position: chr29:36952372-36952194 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 122

Conread position: 648-795
Cow position: chr29:40166171-40166319 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 648-823
Cow position: chr29:4874957-4874777 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 151

Conread position: 648-828
Cow position: chr29:8926534-8926353 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 648-828
Cow position: chr29:19762201-19762376 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 648-828
Cow position: chr29:40117501-40117679 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 648-828
Cow position: chr29:43328571-43328752 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 648-828
Cow position: chr29:45005700-45005521 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 84

Conread position: 649-817
Cow position: chr29:23984026-23983858 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 649-823
Cow position: chr29:31943796-31943971 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 35

Conread position: 650-822
Cow position: chr29:35501719-35501552 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 650-823
Cow position: chr29:44139313-44139141 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 131, 0

Conread position: 651-819
Cow position: chr29:20903353-20903191 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 651-820
Cow position: chr29:10156371-10156206 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 85

Conread position: 651-820
Cow position: chr29:34359047-34358878 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 48

Conread position: 651-823
Cow position: chr29:29923642-29923471 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 57

Conread position: 651-823
Cow position: chr29:38978463-38978633 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 34

Conread position: 651-823
Cow position: chr29:41811654-41811487 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 651-825
Cow position: chr29:21666021-21666192 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 651-828
Cow position: chr29:30548707-30548884 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 651-828
Cow position: chr29:32176613-32176782 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 22

Conread position: 651-828
Cow position: chr29:32656365-32656542 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 145, 27

Conread position: 651-828
Cow position: chr29:38980137-38979967 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 24

Conread position: 652-820
Cow position: chr29:40873943-40874111 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 652-823
Cow position: chr29:5063082-5063248 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 653-828
Cow position: chr29:36530801-36530975 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 25

Conread position: 656-828
Cow position: chr29:21285298-21285467 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 658-828
Cow position: chr29:43441554-43441384 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 20

Conread position: 660-823
Cow position: chr29:30681769-30681608 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 660-823
Cow position: chr29:31200198-31200361 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 660-828
Cow position: chr29:30708678-30708515 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 662-823
Cow position: chr29:28446306-28446153 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 663-828
Cow position: chr29:22167136-22166971 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 159

Conread position: 678-820
Cow position: chr29:39038311-39038169 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 679-826
Cow position: chr29:30918509-30918655 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 684-805
Cow position: chr29:14445081-14444960 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 684-819
Cow position: chr29:26540576-26540441 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 684-828
Cow position: chr29:22735141-22735000 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 684-828
Cow position: chr29:26559278-26559138 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 685-828
Cow position: chr29:742683-742541 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 685-828
Cow position: chr29:32211101-32210963 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 686-819
Cow position: chr29:4070594-4070723 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 686-820
Cow position: chr29:5788994-5789128 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 81

Conread position: 686-828
Cow position: chr29:17109927-17110065 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 686-828
Cow position: chr29:31928955-31929095 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 686-828
Cow position: chr29:36217081-36217220 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 687-828
Cow position: chr29:23825243-23825102 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 688-823
Cow position: chr29:17804503-17804637 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 692-828
Cow position: chr29:32197669-32197805 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 693-826
Cow position: chr29:17154752-17154884 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 695-828
Cow position: chr29:22723576-22723709 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 697-828
Cow position: chr29:7290753-7290884 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 706-823
Cow position: chr29:29308586-29308468 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 707-818
Cow position: chr29:36781317-36781206 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 715-828
Cow position: chr29:15796481-15796593 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 715-828
Cow position: chr29:15797947-15798060 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 727-828
Cow position: chr29:17022157-17022258 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.