Cow genome map

Conread name: Ss1.1-Pig4-TMW8064J03.5

Conread position: 608-787
Cow position: chr3:19162484-19162656 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 80, 20

Conread position: 617-828
Cow position: chr3:75080641-75080846 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 62

Conread position: 620-823
Cow position: chr3:49362996-49363190 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 622-828
Cow position: chr3:78077071-78077276 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 56

Conread position: 627-828
Cow position: chr3:17222260-17222054 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 628-820
Cow position: chr3:13507353-13507546 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 628-823
Cow position: chr3:67704429-67704627 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 639-820
Cow position: chr3:32585052-32585228 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 639-823
Cow position: chr3:55109718-55109532 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 640-819
Cow position: chr3:55189856-55189676 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 0

Conread position: 640-820
Cow position: chr3:80072027-80072207 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 640-823
Cow position: chr3:18001101-18001279 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 640-823
Cow position: chr3:62826718-62826538 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 35

Conread position: 640-828
Cow position: chr3:76155888-76156073 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 38

Conread position: 642-814
Cow position: chr3:70895949-70896120 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 36

Conread position: 642-826
Cow position: chr3:48072979-48072798 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 643-779
Cow position: chr3:44625260-44625126 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 643-793
Cow position: chr3:5851027-5850880 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 126, 35

Conread position: 643-802
Cow position: chr3:12670712-12670555 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 49

Conread position: 643-805
Cow position: chr3:46108717-46108881 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 88

Conread position: 643-806
Cow position: chr3:54030182-54030345 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 643-812
Cow position: chr3:13353265-13353431 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 112

Conread position: 643-812
Cow position: chr3:64135618-64135788 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 643-816
Cow position: chr3:73237097-73237270 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 34

Conread position: 643-819
Cow position: chr3:22232748-22232577 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 643-819
Cow position: chr3:46541924-46541752 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 643-819
Cow position: chr3:61840180-61840352 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 643-819
Cow position: chr3:63177382-63177560 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 643-819
Cow position: chr3:78093480-78093312 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 643-819
Cow position: chr3:81371549-81371726 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 643-820
Cow position: chr3:3471941-3472118 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 73

Conread position: 643-820
Cow position: chr3:7661756-7661930 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 43

Conread position: 643-820
Cow position: chr3:17235306-17235139 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 32

Conread position: 643-820
Cow position: chr3:22165514-22165338 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 36

Conread position: 643-820
Cow position: chr3:58968996-58968825 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 643-820
Cow position: chr3:70762219-70762045 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 65

Conread position: 643-820
Cow position: chr3:83815886-83815710 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 49

Conread position: 643-823
Cow position: chr3:9116931-9117107 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 643-823
Cow position: chr3:19585765-19585944 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 111, 0

Conread position: 643-823
Cow position: chr3:44932416-44932594 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 136

Conread position: 643-823
Cow position: chr3:48362980-48363153 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 643-823
Cow position: chr3:55177847-55177665 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 643-823
Cow position: chr3:55835921-55835740 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 643-823
Cow position: chr3:68627783-68627608 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 62

Conread position: 643-823
Cow position: chr3:70609528-70609707 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 117

Conread position: 643-823
Cow position: chr3:74533252-74533430 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 643-823
Cow position: chr3:74601015-74601195 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 643-823
Cow position: chr3:75608400-75608579 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 106

Conread position: 643-826
Cow position: chr3:5097110-5097291 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 643-826
Cow position: chr3:19626606-19626426 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 45

Conread position: 643-826
Cow position: chr3:26065907-26066085 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 125, 45

Conread position: 643-826
Cow position: chr3:59799151-59799332 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 643-826
Cow position: chr3:68881208-68881038 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 643-827
Cow position: chr3:10347259-10347440 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 151, 32

Conread position: 643-827
Cow position: chr3:14194276-14194094 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 20

Conread position: 643-828
Cow position: chr3:116096-116276 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 157, 34

Conread position: 643-828
Cow position: chr3:3316909-3316730 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 643-828
Cow position: chr3:4319615-4319797 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 643-828
Cow position: chr3:8061031-8061212 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 23

Conread position: 643-828
Cow position: chr3:15052048-15051865 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 43

Conread position: 643-828
Cow position: chr3:15951008-15950827 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 643-828
Cow position: chr3:17331630-17331808 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 85

Conread position: 643-828
Cow position: chr3:23105462-23105276 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 643-828
Cow position: chr3:23408448-23408272 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 643-828
Cow position: chr3:26219148-26218965 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 643-828
Cow position: chr3:27274433-27274614 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 643-828
Cow position: chr3:31361321-31361511 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 97, 80

Conread position: 643-828
Cow position: chr3:49650290-49650474 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 643-828
Cow position: chr3:50768586-50768765 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 32

Conread position: 643-828
Cow position: chr3:52608083-52608268 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 643-828
Cow position: chr3:53150232-53150417 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 34

Conread position: 643-828
Cow position: chr3:53221918-53222099 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 12

Conread position: 643-828
Cow position: chr3:53790633-53790450 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 161, 41

Conread position: 643-828
Cow position: chr3:54506607-54506793 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 643-828
Cow position: chr3:54946032-54946217 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 643-828
Cow position: chr3:55983998-55984184 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 130

Conread position: 643-828
Cow position: chr3:56059711-56059897 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 643-828
Cow position: chr3:59610817-59610632 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 20

Conread position: 643-828
Cow position: chr3:60264814-60264630 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 643-828
Cow position: chr3:64281028-64280845 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 96, 39

Conread position: 643-828
Cow position: chr3:70565834-70565652 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 41

Conread position: 643-828
Cow position: chr3:70899798-70899976 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 643-828
Cow position: chr3:73460867-73461052 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 44, 140

Conread position: 643-828
Cow position: chr3:74079735-74079551 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 643-828
Cow position: chr3:74134603-74134790 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 41

Conread position: 643-828
Cow position: chr3:76922759-76922577 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 46, 65

Conread position: 643-828
Cow position: chr3:80564867-80565052 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 70

Conread position: 643-828
Cow position: chr3:82019939-82019753 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 644-819
Cow position: chr3:45534392-45534219 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 33

Conread position: 644-820
Cow position: chr3:66292272-66292098 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 644-823
Cow position: chr3:23169162-23168985 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 39, 84

Conread position: 644-823
Cow position: chr3:26874497-26874671 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 42, 95

Conread position: 644-823
Cow position: chr3:75479905-75480080 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 644-828
Cow position: chr3:3883914-3883730 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 150

Conread position: 644-828
Cow position: chr3:55272142-55271959 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 645-823
Cow position: chr3:62789274-62789094 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 42, 113

Conread position: 645-828
Cow position: chr3:4548920-4549113 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 645-828
Cow position: chr3:12705640-12705458 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 162, 0

Conread position: 645-828
Cow position: chr3:12712012-12711829 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 43

Conread position: 645-828
Cow position: chr3:20677929-20677756 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 645-828
Cow position: chr3:47753129-47753312 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 647-824
Cow position: chr3:82629220-82629399 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 11

Conread position: 647-828
Cow position: chr3:19682598-19682783 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 49

Conread position: 648-796
Cow position: chr3:81277790-81277638 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 25

Conread position: 648-801
Cow position: chr3:10677730-10677585 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 648-819
Cow position: chr3:49327850-49328021 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 47

Conread position: 648-820
Cow position: chr3:9641474-9641646 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 45

Conread position: 648-822
Cow position: chr3:17936932-17936759 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 648-826
Cow position: chr3:54290607-54290429 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 648-826
Cow position: chr3:74584122-74584291 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 648-828
Cow position: chr3:1785335-1785159 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 648-828
Cow position: chr3:38864024-38864212 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 145

Conread position: 648-828
Cow position: chr3:59474028-59474208 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 36

Conread position: 648-828
Cow position: chr3:78092605-78092426 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 31

Conread position: 651-819
Cow position: chr3:45647589-45647757 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 37

Conread position: 651-820
Cow position: chr3:15506357-15506526 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 113

Conread position: 651-820
Cow position: chr3:31350194-31350026 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 651-820
Cow position: chr3:44330527-44330359 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 651-823
Cow position: chr3:10958331-10958159 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 651-823
Cow position: chr3:69785715-69785543 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 42

Conread position: 651-826
Cow position: chr3:29887512-29887336 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 133

Conread position: 651-826
Cow position: chr3:81881531-81881358 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 102, 59

Conread position: 651-828
Cow position: chr3:525256-525432 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 53

Conread position: 651-828
Cow position: chr3:7337872-7337698 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 651-828
Cow position: chr3:16752348-16752173 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 651-828
Cow position: chr3:39969954-39969776 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 41

Conread position: 651-828
Cow position: chr3:53508529-53508697 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 651-828
Cow position: chr3:68616415-68616244 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 80

Conread position: 651-828
Cow position: chr3:71474497-71474317 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 651-828
Cow position: chr3:74234102-74234272 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 652-811
Cow position: chr3:70614574-70614418 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 26

Conread position: 652-828
Cow position: chr3:32409123-32409298 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 653-819
Cow position: chr3:61224833-61224664 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 5

Conread position: 653-820
Cow position: chr3:50069676-50069841 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 653-823
Cow position: chr3:2067806-2067975 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 653-823
Cow position: chr3:22716388-22716216 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 653-823
Cow position: chr3:79196671-79196840 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 653-826
Cow position: chr3:79094134-79093959 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 63

Conread position: 653-828
Cow position: chr3:15172991-15173167 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 653-828
Cow position: chr3:59604758-59604929 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 653-828
Cow position: chr3:83474655-83474831 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 654-815
Cow position: chr3:2396865-2396716 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 655-823
Cow position: chr3:58767175-58767344 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 655-823
Cow position: chr3:64196739-64196907 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 655-828
Cow position: chr3:17447696-17447529 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 49

Conread position: 658-823
Cow position: chr3:4480858-4481023 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 70

Conread position: 658-823
Cow position: chr3:54982163-54981998 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 33

Conread position: 658-824
Cow position: chr3:59299494-59299658 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 26

Conread position: 658-828
Cow position: chr3:3478338-3478169 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 97

Conread position: 658-828
Cow position: chr3:10668961-10668793 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 26

Conread position: 659-828
Cow position: chr3:76269816-76269977 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 664-818
Cow position: chr3:74754247-74754401 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 31

Conread position: 664-828
Cow position: chr3:36672886-36672725 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 667-828
Cow position: chr3:73443162-73443010 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 669-828
Cow position: chr3:74802139-74801980 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 671-823
Cow position: chr3:20333937-20334088 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 674-823
Cow position: chr3:29828216-29828066 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 676-820
Cow position: chr3:21997854-21997710 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 16

Conread position: 677-826
Cow position: chr3:68708072-68707929 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 677-828
Cow position: chr3:3738419-3738567 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 680-820
Cow position: chr3:51349761-51349901 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 681-828
Cow position: chr3:57274000-57274147 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 22

Conread position: 682-828
Cow position: chr3:44961065-44960919 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 42

Conread position: 682-828
Cow position: chr3:48810704-48810559 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 683-820
Cow position: chr3:23132228-23132091 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 683-828
Cow position: chr3:69650948-69650803 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 684-815
Cow position: chr3:75711249-75711379 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 684-828
Cow position: chr3:53428973-53428831 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 684-828
Cow position: chr3:56476624-56476768 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 684-828
Cow position: chr3:67626402-67626255 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 84

Conread position: 687-828
Cow position: chr3:3946983-3947124 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 687-828
Cow position: chr3:9120790-9120928 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 687-828
Cow position: chr3:41652321-41652462 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 688-819
Cow position: chr3:6182275-6182150 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 688-826
Cow position: chr3:53739239-53739101 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 688-828
Cow position: chr3:7331177-7331041 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 125, 67

Conread position: 688-828
Cow position: chr3:68004756-68004616 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 690-828
Cow position: chr3:5305746-5305884 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 691-823
Cow position: chr3:68156671-68156804 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 691-828
Cow position: chr3:60265302-60265168 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 692-826
Cow position: chr3:53084038-53083902 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 693-827
Cow position: chr3:16505524-16505394 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 693-828
Cow position: chr3:8349614-8349478 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 130

Conread position: 693-828
Cow position: chr3:64648443-64648578 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 694-828
Cow position: chr3:75107726-75107860 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 695-823
Cow position: chr3:15158984-15159112 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 695-826
Cow position: chr3:26603602-26603468 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 695-828
Cow position: chr3:38100094-38100229 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 697-823
Cow position: chr3:50593957-50593834 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 703-828
Cow position: chr3:82123587-82123461 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 44

Conread position: 710-828
Cow position: chr3:24371890-24372007 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 711-826
Cow position: chr3:35238982-35239096 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 711-828
Cow position: chr3:20021238-20021355 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 716-823
Cow position: chr3:16601416-16601523 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 720-827
Cow position: chr3:31115292-31115185 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.