Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8064J07.3
        

               Conread position:
               10-212
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               18-209
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               22-193
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 104
               

               Conread position:
               23-213
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               29-212
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 104
               

               Conread position:
               30-213
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               38-213
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               200-725
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               344
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               202-918
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               204-1098
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 48
               

               Conread position:
               218-668
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               220-739
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               319
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               227-562
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 9
               

               Conread position:
               230-725
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               231-623
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 209
               

               Conread position:
               231-628
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               231-640
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               231-671
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               231-690
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               309
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               231-717
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 193
               

               Conread position:
               231-725
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               318
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               231-730
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               231-742
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               322
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 136
               

               Conread position:
               231-745
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 126
               

               Conread position:
               231-759
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               326
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               55, 196
               

               Conread position:
               231-853
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               231-916
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               231-973
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               231-1112
               

               Cow position:
               
               

               Alignm length:
               916
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               231-1174
               

               Cow position:
               
               

               Alignm length:
               975
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               233-849
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               241-593
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               241-637
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               241-760
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               343
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               243-673
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               257-725
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 53
               

               Conread position:
               259-690
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               262-963
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               279-918
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               411
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               280-593
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 78
               

               Conread position:
               281-765
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               30, 228
               

               Conread position:
               300-765
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 53
               

               Conread position:
               311-752
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               317-642
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               397-730
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 107
               

               Conread position:
               404-725
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               267, 24
               

               Conread position:
               405-766
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               260, 196
               

               Conread position:
               408-765
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               257, 44
               

               Conread position:
               408-789
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               263, 193
               

               Conread position:
               412-690
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               163, 149
               

               Conread position:
               415-777
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 94
               

               Conread position:
               417-718
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               252, 184
               

               Conread position:
               417-765
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               248, 184
               

               Conread position:
               423-748
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               243, 82
               

               Conread position:
               423-749
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               113, 126
               

               Conread position:
               429-724
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               429-749
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               245, 172
               

               Conread position:
               432-775
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 118
               

               Conread position:
               434-760
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               457-700
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               212, 110
               

               Conread position:
               499-698
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               520-692
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               521-1186
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 98
               

               Conread position:
               534-726
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               552-918
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 83
               

               Conread position:
               648-1184
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               358
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               851-1186
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               962-1174
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               98, 86
               
Show alignments to all cow chromosomes.