Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 26-209 |
| Cow position: | chr10:15603576-15603766 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 94, 137 |
| Conread position: | 38-213 |
| Cow position: | chr10:31385844-31385660 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 54-209 |
| Cow position: | chr10:35013586-35013430 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 201-746 |
| Cow position: | chr10:20376408-20375849 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 21 |
| Conread position: | 216-616 |
| Cow position: | chr10:43757974-43758377 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 219-725 |
| Cow position: | chr10:11469214-11469729 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 219-1186 |
| Cow position: | chr10:42735003-42735983 (view UCSC Genome Browser custom track) |
| Alignm length: | 1002 |
| Alignm identity: | 656 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 220-918 |
| Cow position: | chr10:1939284-1938574 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 224-725 |
| Cow position: | chr10:34684448-34684951 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 22 |
| Conread position: | 224-782 |
| Cow position: | chr10:20383508-20382933 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 346 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 230-750 |
| Cow position: | chr10:60488106-60488613 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 231-717 |
| Cow position: | chr10:10414446-10414931 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 231-725 |
| Cow position: | chr10:62215190-62215694 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 231-725 |
| Cow position: | chr10:62776912-62777412 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 231-1086 |
| Cow position: | chr10:54125983-54126834 (view UCSC Genome Browser custom track) |
| Alignm length: | 888 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 232-725 |
| Cow position: | chr10:25496907-25497404 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 322 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 233-672 |
| Cow position: | chr10:49494058-49494498 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 250-723 |
| Cow position: | chr10:54980466-54980002 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 255-947 |
| Cow position: | chr10:26596073-26596774 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 91 |
| Conread position: | 258-725 |
| Cow position: | chr10:29634246-29633777 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 309 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 274-725 |
| Cow position: | chr10:64306538-64306075 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 281-1174 |
| Cow position: | chr10:61295849-61296750 (view UCSC Genome Browser custom track) |
| Alignm length: | 920 |
| Alignm identity: | 602 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 318-1053 |
| Cow position: | chr10:42627070-42627806 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 414-725 |
| Cow position: | chr10:42657783-42658093 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 135 |
| Conread position: | 420-715 |
| Cow position: | chr10:29637791-29637499 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 116, 131 |
| Conread position: | 423-745 |
| Cow position: | chr10:49308402-49308728 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 432-717 |
| Cow position: | chr10:56807597-56807315 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 233, 169 |
| Conread position: | 432-752 |
| Cow position: | chr10:10562614-10562299 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 117 |
| Conread position: | 432-809 |
| Cow position: | chr10:19846857-19847231 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 239, 169 |
| Conread position: | 474-760 |
| Cow position: | chr10:14949705-14949993 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 582-853 |
| Cow position: | chr10:31522844-31523107 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 851-1172 |
| Cow position: | chr10:39780725-39780401 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 106, 10 |
Show alignments to all cow chromosomes.