Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 40-218 |
| Cow position: | chr11:82144025-82144204 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 53-190 |
| Cow position: | chr11:42465601-42465734 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 53-213 |
| Cow position: | chr11:86925112-86925276 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 216-633 |
| Cow position: | chr11:62406738-62406314 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 217-564 |
| Cow position: | chr11:7684634-7684981 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 11, 187 |
| Conread position: | 231-604 |
| Cow position: | chr11:71170242-71169865 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 231-638 |
| Cow position: | chr11:35963625-35963222 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 231-724 |
| Cow position: | chr11:75131694-75132184 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 231-725 |
| Cow position: | chr11:21903117-21902634 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 231-725 |
| Cow position: | chr11:34019137-34019624 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-725 |
| Cow position: | chr11:75918790-75919291 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 231-739 |
| Cow position: | chr11:17911424-17910908 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-835 |
| Cow position: | chr11:77779045-77778422 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 231-918 |
| Cow position: | chr11:15995920-15996615 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 239-572 |
| Cow position: | chr11:13499091-13499435 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 120 |
| Conread position: | 255-936 |
| Cow position: | chr11:10211767-10211074 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 329-629 |
| Cow position: | chr11:7393009-7393300 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 331-1174 |
| Cow position: | chr11:7111702-7112539 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 381 |
| Conread position: | 413-791 |
| Cow position: | chr11:13057810-13057431 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 58 |
| Conread position: | 413-919 |
| Cow position: | chr11:44497213-44496705 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 324 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 256, 196 |
| Conread position: | 423-759 |
| Cow position: | chr11:84921025-84921358 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 245, 48 |
| Conread position: | 435-777 |
| Cow position: | chr11:10077307-10076967 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 168 |
| Conread position: | 478-750 |
| Cow position: | chr11:9660929-9660655 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 658-1183 |
| Cow position: | chr11:24676614-24677164 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 77 |
Show alignments to all cow chromosomes.