Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 8-212 |
| Cow position: | chr13:16342652-16342866 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 53-216 |
| Cow position: | chr13:33767512-33767676 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 200-760 |
| Cow position: | chr13:34769658-34769100 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 357 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 210-748 |
| Cow position: | chr13:11828787-11828250 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 214-725 |
| Cow position: | chr13:2913994-2913493 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 220-725 |
| Cow position: | chr13:13047782-13047278 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 326 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 221-637 |
| Cow position: | chr13:60649515-60649929 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 231-632 |
| Cow position: | chr13:34144619-34144214 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 231-669 |
| Cow position: | chr13:33929250-33928807 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 231-698 |
| Cow position: | chr13:41590630-41591100 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 231-718 |
| Cow position: | chr13:34691574-34692066 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 231-725 |
| Cow position: | chr13:3275446-3275948 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 231-802 |
| Cow position: | chr13:20544129-20543536 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 231-853 |
| Cow position: | chr13:20580800-20580184 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 231-918 |
| Cow position: | chr13:33827425-33826747 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 431 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 236-849 |
| Cow position: | chr13:34935032-34935661 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 268-765 |
| Cow position: | chr13:30658628-30658129 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 89 |
| Conread position: | 331-672 |
| Cow position: | chr13:32164916-32165248 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 407-699 |
| Cow position: | chr13:5281709-5281998 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 98, 113 |
| Conread position: | 418-724 |
| Cow position: | chr13:6939262-6938963 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 432-685 |
| Cow position: | chr13:62329156-62328900 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 232, 0 |
| Conread position: | 433-699 |
| Cow position: | chr13:32641881-32641624 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 241, 19 |
| Conread position: | 454-705 |
| Cow position: | chr13:47577967-47577713 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 474-760 |
| Cow position: | chr13:49194100-49193813 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 616-1120 |
| Cow position: | chr13:54283233-54283739 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 330 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 954-1172 |
| Cow position: | chr13:20543412-20543200 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 107, 11 |
Show alignments to all cow chromosomes.