Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 10-213 |
| Cow position: | chr14:43694040-43693826 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 212-1172 |
| Cow position: | chr14:46082683-46083659 (view UCSC Genome Browser custom track) |
| Alignm length: | 1000 |
| Alignm identity: | 670 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 216-607 |
| Cow position: | chr14:33434456-33434059 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 216-918 |
| Cow position: | chr14:41086675-41085963 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 453 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 220-725 |
| Cow position: | chr14:45771723-45771217 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 224-723 |
| Cow position: | chr14:44421166-44421656 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 230-750 |
| Cow position: | chr14:44857817-44857284 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 349 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 231-539 |
| Cow position: | chr14:44224489-44224795 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 231-586 |
| Cow position: | chr14:7832338-7831980 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 231-750 |
| Cow position: | chr14:42150678-42151204 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 231-766 |
| Cow position: | chr14:33060694-33061226 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 358 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-1184 |
| Cow position: | chr14:45305552-45304590 (view UCSC Genome Browser custom track) |
| Alignm length: | 989 |
| Alignm identity: | 644 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 232-1169 |
| Cow position: | chr14:40337783-40338722 (view UCSC Genome Browser custom track) |
| Alignm length: | 962 |
| Alignm identity: | 623 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 237-669 |
| Cow position: | chr14:44550200-44550625 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 238-911 |
| Cow position: | chr14:42403029-42403706 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 240-917 |
| Cow position: | chr14:45534275-45533591 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 421 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 257-918 |
| Cow position: | chr14:47622747-47623407 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 422 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 317-705 |
| Cow position: | chr14:22242076-22242463 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 330-913 |
| Cow position: | chr14:23691969-23691385 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 361 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 397-672 |
| Cow position: | chr14:45849566-45849834 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 399-738 |
| Cow position: | chr14:45505695-45505357 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 399-1035 |
| Cow position: | chr14:35389154-35388515 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 398 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 403-725 |
| Cow position: | chr14:36966092-36966417 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 110 |
| Conread position: | 407-901 |
| Cow position: | chr14:1498300-1498797 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 231, 34 |
| Conread position: | 427-662 |
| Cow position: | chr14:41771260-41771496 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 432-728 |
| Cow position: | chr14:45713623-45713327 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 237, 58 |
| Conread position: | 432-760 |
| Cow position: | chr14:49940645-49940325 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 233, 148 |
| Conread position: | 454-748 |
| Cow position: | chr14:45766411-45766708 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 222, 260 |
| Conread position: | 537-783 |
| Cow position: | chr14:11466749-11466996 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 131, 68 |
Show alignments to all cow chromosomes.