Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 28-218 |
| Cow position: | chr17:33369738-33369923 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 51-210 |
| Cow position: | chr17:16222065-16222230 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 204-918 |
| Cow position: | chr17:23842330-23843050 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 220-745 |
| Cow position: | chr17:31202379-31201848 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 222-918 |
| Cow position: | chr17:1542672-1543365 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 431 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 229-777 |
| Cow position: | chr17:38616166-38616719 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 231-725 |
| Cow position: | chr17:56302-55803 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 231-725 |
| Cow position: | chr17:1285367-1284866 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 231-725 |
| Cow position: | chr17:2285936-2286433 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 231-777 |
| Cow position: | chr17:4079403-4079948 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 350 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 231-799 |
| Cow position: | chr17:22432465-22431892 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-897 |
| Cow position: | chr17:44854519-44853860 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 415 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 231-918 |
| Cow position: | chr17:1944558-1945245 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 434 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 231-918 |
| Cow position: | chr17:23858816-23858127 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 231-1184 |
| Cow position: | chr17:15369413-15370368 (view UCSC Genome Browser custom track) |
| Alignm length: | 973 |
| Alignm identity: | 626 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 232-1079 |
| Cow position: | chr17:3695497-3694627 (view UCSC Genome Browser custom track) |
| Alignm length: | 885 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 171 |
| Conread position: | 233-725 |
| Cow position: | chr17:16017007-16017499 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 9, 126 |
| Conread position: | 236-607 |
| Cow position: | chr17:2145490-2145866 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 244-807 |
| Cow position: | chr17:1773993-1774558 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 247-725 |
| Cow position: | chr17:20089477-20089008 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 306 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 279-749 |
| Cow position: | chr17:156501-156040 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 395-686 |
| Cow position: | chr17:36798433-36798141 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 412-726 |
| Cow position: | chr17:1535492-1535177 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 414-669 |
| Cow position: | chr17:42262305-42262560 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 416-749 |
| Cow position: | chr17:21801318-21801647 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 222, 185 |
| Conread position: | 459-698 |
| Cow position: | chr17:27663404-27663641 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 209, 15 |
| Conread position: | 906-1172 |
| Cow position: | chr17:4059119-4059368 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 13 |
Show alignments to all cow chromosomes.