Cow genome map

Conread name: Ss1.1-Pig4-TMW8064J07.3

Conread position: 21-216
Cow position: chr2:13535664-13535869 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 136

Conread position: 39-204
Cow position: chr2:61078718-61078551 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 114

Conread position: 216-918
Cow position: chr2:46944552-46945257 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 440
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 34

Conread position: 221-918
Cow position: chr2:82164153-82164861 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 437
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 141

Conread position: 225-812
Cow position: chr2:24395168-24394564 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 6

Conread position: 226-1174
Cow position: chr2:7900019-7900976 (view UCSC Genome Browser custom track)
Alignm length: 973
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 5

Conread position: 227-925
Cow position: chr2:16283968-16284664 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 9

Conread position: 230-603
Cow position: chr2:54692831-54693208 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 36, 20

Conread position: 231-690
Cow position: chr2:45923128-45922661 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 314
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 19

Conread position: 231-725
Cow position: chr2:1492361-1491874 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 309
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 180, 44

Conread position: 231-738
Cow position: chr2:52155985-52155464 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 333
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 19

Conread position: 231-739
Cow position: chr2:11728153-11728663 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 231-750
Cow position: chr2:5482578-5482057 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 336
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 42, 19

Conread position: 231-766
Cow position: chr2:40243889-40244426 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 341
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 20

Conread position: 231-826
Cow position: chr2:49596784-49597373 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 387
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 80, 19

Conread position: 231-918
Cow position: chr2:56158475-56157781 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 433
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 46, 19

Conread position: 231-918
Cow position: chr2:85360066-85359377 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 432
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 48, 26

Conread position: 231-1130
Cow position: chr2:6876485-6877383 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 22

Conread position: 231-1169
Cow position: chr2:15580020-15579049 (view UCSC Genome Browser custom track)
Alignm length: 982
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 231-1186
Cow position: chr2:14559176-14560098 (view UCSC Genome Browser custom track)
Alignm length: 978
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 236-725
Cow position: chr2:11971152-11970665 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 324
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 10

Conread position: 236-725
Cow position: chr2:44167463-44166970 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 14

Conread position: 249-638
Cow position: chr2:63294750-63294355 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 260
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 112

Conread position: 262-633
Cow position: chr2:2358614-2358248 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 242
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 32

Conread position: 266-613
Cow position: chr2:25242968-25243318 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 91

Conread position: 271-1136
Cow position: chr2:41148092-41148951 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 272-672
Cow position: chr2:5897058-5897460 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 261
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 86

Conread position: 279-917
Cow position: chr2:1685431-1686070 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 318-604
Cow position: chr2:28622532-28622253 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 329-1027
Cow position: chr2:54651284-54650604 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 31

Conread position: 330-783
Cow position: chr2:6878289-6878748 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 302
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 312

Conread position: 347-725
Cow position: chr2:80494659-80495039 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 16

Conread position: 355-725
Cow position: chr2:2104022-2103648 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 408-759
Cow position: chr2:54423023-54422668 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 224
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 143

Conread position: 409-752
Cow position: chr2:69224413-69224754 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 127, 132

Conread position: 412-725
Cow position: chr2:36076901-36076590 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 254, 281

Conread position: 429-668
Cow position: chr2:203957-203719 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 82

Conread position: 429-706
Cow position: chr2:11967589-11967317 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 236, 172

Conread position: 432-765
Cow position: chr2:46028618-46028947 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 206, 169

Conread position: 433-717
Cow position: chr2:84493192-84493473 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 232, 168

Conread position: 433-765
Cow position: chr2:84096204-84096533 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 57

Conread position: 439-827
Cow position: chr2:28644989-28644601 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 252
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 176, 75

Conread position: 454-765
Cow position: chr2:29428825-29429134 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 151

Conread position: 484-765
Cow position: chr2:34556987-34556707 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 185, 132

Conread position: 541-760
Cow position: chr2:32501363-32501141 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 111, 185

Conread position: 851-1086
Cow position: chr2:44992678-44992440 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 9

Conread position: 894-1181
Cow position: chr2:44936449-44936156 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 25

Show alignments to all cow chromosomes.