Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 53-213 |
| Cow position: | chr22:6013909-6014078 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 54-173 |
| Cow position: | chr22:12345357-12345482 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 108 |
| Conread position: | 201-638 |
| Cow position: | chr22:37145685-37146124 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 49 |
| Conread position: | 214-582 |
| Cow position: | chr22:6088815-6088448 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 224-652 |
| Cow position: | chr22:1317913-1318342 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 231-568 |
| Cow position: | chr22:44476491-44476827 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 231-725 |
| Cow position: | chr22:32489129-32488627 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 231-725 |
| Cow position: | chr22:36535374-36534884 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 231-918 |
| Cow position: | chr22:5671248-5671926 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 428 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 231-918 |
| Cow position: | chr22:40379720-40380403 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 430 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 231-1132 |
| Cow position: | chr22:9463918-9464807 (view UCSC Genome Browser custom track) |
| Alignm length: | 920 |
| Alignm identity: | 604 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 231-1171 |
| Cow position: | chr22:11029094-11030030 (view UCSC Genome Browser custom track) |
| Alignm length: | 963 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-1174 |
| Cow position: | chr22:6505435-6504470 (view UCSC Genome Browser custom track) |
| Alignm length: | 988 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 232-690 |
| Cow position: | chr22:3308523-3308065 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 232-1161 |
| Cow position: | chr22:8137747-8136828 (view UCSC Genome Browser custom track) |
| Alignm length: | 957 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 240-631 |
| Cow position: | chr22:37735304-37735701 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 247-852 |
| Cow position: | chr22:1314160-1313540 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 255-697 |
| Cow position: | chr22:35687475-35687027 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 120 |
| Conread position: | 255-853 |
| Cow position: | chr22:41421321-41420730 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 391 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 257-725 |
| Cow position: | chr22:36733636-36734109 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 286-692 |
| Cow position: | chr22:1295029-1294627 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 311-570 |
| Cow position: | chr22:46545226-46545483 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 317-686 |
| Cow position: | chr22:37139893-37140258 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 397-723 |
| Cow position: | chr22:34695101-34695429 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 412-795 |
| Cow position: | chr22:32481825-32481441 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 253 |
| Conread position: | 412-918 |
| Cow position: | chr22:119133-118622 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 262, 13 |
| Conread position: | 415-684 |
| Cow position: | chr22:17072240-17072501 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 416-637 |
| Cow position: | chr22:47727354-47727572 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 424-1043 |
| Cow position: | chr22:1286308-1285668 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 413 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 531-923 |
| Cow position: | chr22:1317513-1317907 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 536-745 |
| Cow position: | chr22:1623117-1623327 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 555-750 |
| Cow position: | chr22:8741548-8741356 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 566-1086 |
| Cow position: | chr22:45881334-45880803 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 197, 44 |
| Conread position: | 851-1078 |
| Cow position: | chr22:17072909-17073142 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 853-1109 |
| Cow position: | chr22:41420707-41420456 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 913-1172 |
| Cow position: | chr22:1320727-1320995 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 169 |
Show alignments to all cow chromosomes.