Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 28-213 |
| Cow position: | chr28:3803436-3803243 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 221-1168 |
| Cow position: | chr28:5811155-5812123 (view UCSC Genome Browser custom track) |
| Alignm length: | 985 |
| Alignm identity: | 644 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 226-736 |
| Cow position: | chr28:5763857-5764368 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 226-780 |
| Cow position: | chr28:10292608-10293150 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 8 |
| Conread position: | 231-673 |
| Cow position: | chr28:9138481-9138036 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 237-723 |
| Cow position: | chr28:21927885-21928378 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 134 |
| Conread position: | 240-626 |
| Cow position: | chr28:21324218-21324604 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 240-750 |
| Cow position: | chr28:1932756-1932233 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 333 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 241-673 |
| Cow position: | chr28:15572202-15572636 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 255-698 |
| Cow position: | chr28:2847940-2847497 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 260-717 |
| Cow position: | chr28:26005913-26006375 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 278-760 |
| Cow position: | chr28:4384800-4384317 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 317-748 |
| Cow position: | chr28:15680531-15680966 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 330-851 |
| Cow position: | chr28:21357575-21358090 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 350 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 397-729 |
| Cow position: | chr28:12233710-12233387 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 407-1098 |
| Cow position: | chr28:17313586-17314300 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 412-739 |
| Cow position: | chr28:30563845-30564170 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 472-1031 |
| Cow position: | chr28:7815954-7816517 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 184, 136 |
| Conread position: | 478-652 |
| Cow position: | chr28:9952772-9952944 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 484-704 |
| Cow position: | chr28:17333492-17333270 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 528-763 |
| Cow position: | chr28:7791981-7791742 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 574-1169 |
| Cow position: | chr28:24666423-24667027 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 36 |
| Conread position: | 636-1158 |
| Cow position: | chr28:2991084-2990563 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 339 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 852-1173 |
| Cow position: | chr28:10620010-10619686 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 67 |
Show alignments to all cow chromosomes.