Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 24-212 |
| Cow position: | chr4:10871162-10871357 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 45-213 |
| Cow position: | chr4:42638034-42638206 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 55 |
| Conread position: | 221-570 |
| Cow position: | chr4:4167702-4168053 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 223-698 |
| Cow position: | chr4:44087123-44086656 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 226-798 |
| Cow position: | chr4:54966173-54966732 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 231-725 |
| Cow position: | chr4:10407073-10407577 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-739 |
| Cow position: | chr4:1466196-1465699 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 231-787 |
| Cow position: | chr4:5819743-5820306 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 373 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 231-1136 |
| Cow position: | chr4:46662361-46663268 (view UCSC Genome Browser custom track) |
| Alignm length: | 939 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 247-829 |
| Cow position: | chr4:21344272-21343689 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 253-722 |
| Cow position: | chr4:54953963-54954432 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 330-690 |
| Cow position: | chr4:66924349-66924713 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 330-750 |
| Cow position: | chr4:4445748-4446170 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 392-853 |
| Cow position: | chr4:27301985-27301514 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 417-749 |
| Cow position: | chr4:27987515-27987845 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 133 |
| Conread position: | 423-777 |
| Cow position: | chr4:27307032-27306681 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 101 |
| Conread position: | 424-765 |
| Cow position: | chr4:14125168-14125503 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 112, 125 |
| Conread position: | 432-722 |
| Cow position: | chr4:49024831-49024544 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 233, 169 |
| Conread position: | 472-1129 |
| Cow position: | chr4:34186420-34185775 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 75 |
| Conread position: | 536-725 |
| Cow position: | chr4:11617011-11617203 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 133, 178 |
| Conread position: | 636-1158 |
| Cow position: | chr4:4168076-4168598 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 334 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 75, 58 |
Show alignments to all cow chromosomes.