Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 53-212 |
| Cow position: | chr6:42574869-42574710 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 55-210 |
| Cow position: | chr6:40156901-40157063 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 218-750 |
| Cow position: | chr6:2400691-2401231 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 32 |
| Conread position: | 219-482 |
| Cow position: | chr6:10638983-10639250 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 222-1174 |
| Cow position: | chr6:12094506-12093507 (view UCSC Genome Browser custom track) |
| Alignm length: | 1023 |
| Alignm identity: | 663 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 225-1184 |
| Cow position: | chr6:6478055-6477089 (view UCSC Genome Browser custom track) |
| Alignm length: | 987 |
| Alignm identity: | 649 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 231-593 |
| Cow position: | chr6:4905748-4905403 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 231-638 |
| Cow position: | chr6:19452393-19452806 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 231-717 |
| Cow position: | chr6:41151492-41151985 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 197 |
| Conread position: | 231-918 |
| Cow position: | chr6:13275041-13275737 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 431 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 233-1028 |
| Cow position: | chr6:38230701-38231496 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 242-725 |
| Cow position: | chr6:33387276-33387768 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 318 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 246-668 |
| Cow position: | chr6:11167617-11168042 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 330-918 |
| Cow position: | chr6:42925941-42926533 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 332-777 |
| Cow position: | chr6:10560077-10559627 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 346-750 |
| Cow position: | chr6:43608851-43608450 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 352-913 |
| Cow position: | chr6:59921698-59921124 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 371 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 395-777 |
| Cow position: | chr6:16598002-16598383 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 399-761 |
| Cow position: | chr6:9752392-9752033 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 407-1006 |
| Cow position: | chr6:26490278-26490881 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 439-765 |
| Cow position: | chr6:22639246-22638932 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 269, 110 |
| Conread position: | 486-758 |
| Cow position: | chr6:7181609-7181336 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 525-725 |
| Cow position: | chr6:6101199-6101002 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 537-750 |
| Cow position: | chr6:10639276-10639493 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 565-923 |
| Cow position: | chr6:47957858-47958214 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 222, 94 |
| Conread position: | 859-1173 |
| Cow position: | chr6:22852925-22852604 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 60 |
Show alignments to all cow chromosomes.