Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 57-216 |
| Cow position: | chr7:31890582-31890415 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 211-1032 |
| Cow position: | chr7:63019174-63020019 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 218-954 |
| Cow position: | chr7:24935711-24934962 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 220-777 |
| Cow position: | chr7:20432102-20431544 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 226-652 |
| Cow position: | chr7:41487962-41488392 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 226-725 |
| Cow position: | chr7:67415644-67416136 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 230-1174 |
| Cow position: | chr7:29372255-29371316 (view UCSC Genome Browser custom track) |
| Alignm length: | 977 |
| Alignm identity: | 629 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 231-586 |
| Cow position: | chr7:30157855-30157487 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 231-633 |
| Cow position: | chr7:14261269-14261669 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 231-641 |
| Cow position: | chr7:35838102-35838515 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 231-652 |
| Cow position: | chr7:38534739-38535162 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 231-669 |
| Cow position: | chr7:24484994-24485439 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 175 |
| Conread position: | 231-676 |
| Cow position: | chr7:41881875-41881431 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 231-700 |
| Cow position: | chr7:44681093-44681558 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 231-748 |
| Cow position: | chr7:59940826-59941362 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 367 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 231-918 |
| Cow position: | chr7:21977389-21976692 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 437 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 233-750 |
| Cow position: | chr7:41871769-41871245 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 237-800 |
| Cow position: | chr7:63962745-63962152 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 245-638 |
| Cow position: | chr7:49443834-49444229 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 276-633 |
| Cow position: | chr7:45759429-45759780 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 278-1186 |
| Cow position: | chr7:53989272-53990209 (view UCSC Genome Browser custom track) |
| Alignm length: | 959 |
| Alignm identity: | 630 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 280-725 |
| Cow position: | chr7:39642227-39641781 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 310-724 |
| Cow position: | chr7:37020427-37020845 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 329-725 |
| Cow position: | chr7:52120864-52121260 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 330-536 |
| Cow position: | chr7:21252617-21252414 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 330-913 |
| Cow position: | chr7:1359215-1358629 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 330-918 |
| Cow position: | chr7:35298910-35298336 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 362 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 385-645 |
| Cow position: | chr7:17827801-17827547 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 397-553 |
| Cow position: | chr7:42426617-42426774 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 408-614 |
| Cow position: | chr7:684100-683896 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 408-706 |
| Cow position: | chr7:31784116-31784407 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 257, 90 |
| Conread position: | 432-722 |
| Cow position: | chr7:49083-48796 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 433-597 |
| Cow position: | chr7:64393971-64394136 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 434-760 |
| Cow position: | chr7:52148291-52147970 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 120 |
| Conread position: | 459-745 |
| Cow position: | chr7:18446452-18446163 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 478-918 |
| Cow position: | chr7:30447263-30446816 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 196, 239 |
| Conread position: | 480-1186 |
| Cow position: | chr7:68859577-68858879 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 588-1109 |
| Cow position: | chr7:30157456-30156919 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 98 |
| Conread position: | 851-1186 |
| Cow position: | chr7:24421086-24421415 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 856-1187 |
| Cow position: | chr7:3153904-3154229 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 65 |
Show alignments to all cow chromosomes.