Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J07.3 |
| Conread position: | 8-213 |
| Cow position: | chr8:43974428-43974640 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 14-197 |
| Cow position: | chr8:28383224-28383042 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 26-190 |
| Cow position: | chr8:4999598-4999429 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 28-213 |
| Cow position: | chr8:41147115-41146923 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 101 |
| Conread position: | 193-750 |
| Cow position: | chr8:27985326-27984762 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 222-1174 |
| Cow position: | chr8:11971924-11970941 (view UCSC Genome Browser custom track) |
| Alignm length: | 1009 |
| Alignm identity: | 641 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 224-726 |
| Cow position: | chr8:38609300-38608796 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 225-849 |
| Cow position: | chr8:54825732-54825097 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 229-787 |
| Cow position: | chr8:23215530-23216099 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 231-556 |
| Cow position: | chr8:58187540-58187219 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 231-690 |
| Cow position: | chr8:1584196-1584663 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 231-750 |
| Cow position: | chr8:21118018-21117494 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 231-750 |
| Cow position: | chr8:27092974-27092458 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 231-750 |
| Cow position: | chr8:50751354-50751869 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 338 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 231-809 |
| Cow position: | chr8:21204414-21204991 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 231-918 |
| Cow position: | chr8:45318361-45317667 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 231-918 |
| Cow position: | chr8:47669200-47669890 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 231-1177 |
| Cow position: | chr8:11756373-11757336 (view UCSC Genome Browser custom track) |
| Alignm length: | 985 |
| Alignm identity: | 628 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 240-725 |
| Cow position: | chr8:44078277-44077782 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 338 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 240-749 |
| Cow position: | chr8:39952409-39951889 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 250-503 |
| Cow position: | chr8:3337267-3337520 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 251-699 |
| Cow position: | chr8:9542021-9541593 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 279-680 |
| Cow position: | chr8:45162829-45162433 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 281-825 |
| Cow position: | chr8:30416712-30417259 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 352 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 330-671 |
| Cow position: | chr8:24421959-24421615 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 330-725 |
| Cow position: | chr8:51861145-51860749 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 395-725 |
| Cow position: | chr8:44691965-44692293 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 397-809 |
| Cow position: | chr8:40573066-40572658 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 183 |
| Conread position: | 397-849 |
| Cow position: | chr8:61037416-61036963 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 475-791 |
| Cow position: | chr8:19228802-19229105 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 283, 195 |
| Conread position: | 477-760 |
| Cow position: | chr8:53423925-53424206 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 190, 101 |
| Conread position: | 500-913 |
| Cow position: | chr8:45188075-45188493 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 133, 109 |
| Conread position: | 954-1098 |
| Cow position: | chr8:24421381-24421238 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 94 |
Show alignments to all cow chromosomes.