Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8065M04.3 |
| Conread position: | 1-161 |
| Cow position: | chr1:52291077-52290918 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 141 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 211-376 |
| Cow position: | chr1:52289987-52289822 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-498 |
| Cow position: | chr1:52289027-52288904 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 120 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 497-731 |
| Cow position: | chr1:52288740-52288506 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-902 |
| Cow position: | chr1:52287980-52287799 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 883-1030 |
| Cow position: | chr1:52287676-52287529 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 137 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1089-1239 |
| Cow position: | chr1:52287050-52286900 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1235-1342 |
| Cow position: | chr1:52286757-52286650 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1341-1471 |
| Cow position: | chr1:52286454-52286324 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 124 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1470-1561 |
| Cow position: | chr1:52286117-52286026 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1557-1738 |
| Cow position: | chr1:52284717-52284536 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1721-1829 |
| Cow position: | chr1:52284428-52284321 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1821-1970 |
| Cow position: | chr1:52284164-52284015 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1967-2058 |
| Cow position: | chr1:52283782-52283691 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2048-2225 |
| Cow position: | chr1:52283494-52283317 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2222-2318 |
| Cow position: | chr1:52283231-52283135 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2315-2444 |
| Cow position: | chr1:52282923-52282794 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 125 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2419-2564 |
| Cow position: | chr1:52282399-52282253 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 132 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2561-2903 |
| Cow position: | chr1:52282109-52281772 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 0 |
Show alignments to all cow chromosomes.