Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8066A05.3
        

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               9-230
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               9-333
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               9-338
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               9-343
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               9-352
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               12-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               19-223
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               35-355
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               6, 168
               

               Conread position:
               38-333
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 12
               

               Conread position:
               44-333
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               175, 75
               

               Conread position:
               49-339
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               52-289
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               165, 11
               

               Conread position:
               52-338
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               134, 82
               

               Conread position:
               63-343
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 114
               

               Conread position:
               67-238
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               71-209
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               73-335
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               181, 118
               

               Conread position:
               73-337
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               179, 150
               

               Conread position:
               75-346
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               142, 10
               

               Conread position:
               76-333
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               133, 211
               

               Conread position:
               77-225
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               138, 82
               

               Conread position:
               77-338
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               89, 159
               

               Conread position:
               77-343
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 92
               

               Conread position:
               77-346
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               87-307
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               87-337
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               88-244
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               88-353
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               136, 103
               

               Conread position:
               89-343
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               90-232
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               90-239
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               90-293
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-293
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               90-322
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               90-322
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               90-332
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               90-335
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 156
               

               Conread position:
               90-335
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               90-336
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               163, 101
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               90-338
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               131, 170
               

               Conread position:
               90-338
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               90-338
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               90-351
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               90-352
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               130, 81
               

               Conread position:
               90-353
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 137
               

               Conread position:
               90-362
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               127, 17
               

               Conread position:
               91-245
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               91-288
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               121, 100
               

               Conread position:
               91-337
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               91-343
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               97-300
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               97-319
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               64, 96
               

               Conread position:
               102-354
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 171
               

               Conread position:
               110-354
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               119-346
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               121-353
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               123-346
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 65
               

               Conread position:
               127-289
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               140-353
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               77, 52
               
Show alignments to all cow chromosomes.