Cow genome map
Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
Conread position: | 2-210 |
Cow position: | chr1:70178056-70178263 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 157 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 64, 22 |
Conread position: | 9-230 |
Cow position: | chr1:4264853-4264630 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 32, 46 |
Conread position: | 9-333 |
Cow position: | chr1:57854264-57854593 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 84 |
Conread position: | 9-338 |
Cow position: | chr1:23086621-23086294 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 236 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 22, 54 |
Conread position: | 9-343 |
Cow position: | chr1:61554306-61553974 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 42 |
Conread position: | 9-352 |
Cow position: | chr1:81454325-81454663 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 85 |
Conread position: | 12-329 |
Cow position: | chr1:17092178-17092500 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 222 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 19-223 |
Cow position: | chr1:41607239-41607444 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 156 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 13, 73 |
Conread position: | 35-355 |
Cow position: | chr1:20264761-20264434 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 234 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 6, 168 |
Conread position: | 38-333 |
Cow position: | chr1:31127041-31126749 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 12 |
Conread position: | 44-333 |
Cow position: | chr1:90845598-90845314 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 210 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 175, 75 |
Conread position: | 49-339 |
Cow position: | chr1:60860061-60860351 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 40 |
Conread position: | 52-289 |
Cow position: | chr1:93391816-93392052 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 181 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 165, 11 |
Conread position: | 52-338 |
Cow position: | chr1:57357206-57357497 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 200 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 134, 82 |
Conread position: | 63-343 |
Cow position: | chr1:20807171-20806895 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 201 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 95, 114 |
Conread position: | 67-238 |
Cow position: | chr1:23920955-23920795 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 60 |
Conread position: | 71-209 |
Cow position: | chr1:83390761-83390621 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 73-335 |
Cow position: | chr1:94409180-94408930 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 188 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 181, 118 |
Conread position: | 73-337 |
Cow position: | chr1:4279788-4279527 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 192 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 179, 150 |
Conread position: | 75-346 |
Cow position: | chr1:84760739-84760472 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 203 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 142, 10 |
Conread position: | 76-333 |
Cow position: | chr1:13681147-13680891 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 169 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 133, 211 |
Conread position: | 77-225 |
Cow position: | chr1:86643201-86643055 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 138, 82 |
Conread position: | 77-338 |
Cow position: | chr1:92708977-92709239 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 89, 159 |
Conread position: | 77-343 |
Cow position: | chr1:85000916-85000653 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 193 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 81, 92 |
Conread position: | 77-346 |
Cow position: | chr1:65187617-65187885 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 201 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 53, 8 |
Conread position: | 87-307 |
Cow position: | chr1:94390589-94390800 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 87-337 |
Cow position: | chr1:94744717-94744960 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 170 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 88-244 |
Cow position: | chr1:8142842-8143001 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 88-353 |
Cow position: | chr1:24509459-24509720 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 184 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 136, 103 |
Conread position: | 89-343 |
Cow position: | chr1:81491314-81491563 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 193 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 128, 33 |
Conread position: | 90-232 |
Cow position: | chr1:41972986-41972845 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 90-239 |
Cow position: | chr1:97447308-97447457 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 90-244 |
Cow position: | chr1:7489324-7489170 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 90-244 |
Cow position: | chr1:70171634-70171480 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 40, 49 |
Conread position: | 90-293 |
Cow position: | chr1:24684492-24684294 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-293 |
Cow position: | chr1:35544512-35544314 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 90-322 |
Cow position: | chr1:14383178-14382947 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 117, 18 |
Conread position: | 90-322 |
Cow position: | chr1:15983874-15983652 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 168 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 90-332 |
Cow position: | chr1:43588500-43588731 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 90-335 |
Cow position: | chr1:94753982-94754222 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 167 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 98, 156 |
Conread position: | 90-335 |
Cow position: | chr1:100397424-100397658 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 174 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 90-336 |
Cow position: | chr1:55114537-55114781 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 190 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 163, 101 |
Conread position: | 90-337 |
Cow position: | chr1:24763998-24763760 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 171 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-337 |
Cow position: | chr1:46389164-46389403 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-337 |
Cow position: | chr1:61606470-61606708 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 167 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 90-337 |
Cow position: | chr1:67902295-67902056 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 175 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-337 |
Cow position: | chr1:71086882-71087122 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 90-337 |
Cow position: | chr1:89407464-89407230 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 166 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 90-337 |
Cow position: | chr1:100045940-100046175 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 90-338 |
Cow position: | chr1:13313926-13314169 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 182 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 131, 170 |
Conread position: | 90-338 |
Cow position: | chr1:57893291-57893554 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 189 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 90-338 |
Cow position: | chr1:83321669-83321417 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 90-351 |
Cow position: | chr1:40377965-40378221 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 182 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 150, 88 |
Conread position: | 90-352 |
Cow position: | chr1:31979098-31978838 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 130, 81 |
Conread position: | 90-353 |
Cow position: | chr1:89915724-89915986 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 137 |
Conread position: | 90-362 |
Cow position: | chr1:6968595-6968865 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 127, 17 |
Conread position: | 91-245 |
Cow position: | chr1:94761493-94761341 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 91-288 |
Cow position: | chr1:13992425-13992620 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 121, 100 |
Conread position: | 91-337 |
Cow position: | chr1:6309454-6309216 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 170 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 91-343 |
Cow position: | chr1:57562819-57563067 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 67, 45 |
Conread position: | 97-300 |
Cow position: | chr1:99249634-99249849 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 97-319 |
Cow position: | chr1:39638890-39638669 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 64, 96 |
Conread position: | 102-354 |
Cow position: | chr1:64753277-64753531 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 171 |
Conread position: | 110-354 |
Cow position: | chr1:93244690-93244932 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 50, 83 |
Conread position: | 119-346 |
Cow position: | chr1:57776418-57776651 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 168 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 49, 15 |
Conread position: | 121-353 |
Cow position: | chr1:69702969-69703204 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 123-346 |
Cow position: | chr1:28329814-28329593 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 40, 65 |
Conread position: | 127-289 |
Cow position: | chr1:13738112-13737949 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 140-353 |
Cow position: | chr1:80275836-80275625 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 77, 52 |
Show alignments to all cow chromosomes.