Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 8-333 |
| Cow position: | chr10:4908976-4909302 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 9-331 |
| Cow position: | chr10:10223394-10223717 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 9-353 |
| Cow position: | chr10:26023433-26023779 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 261 |
| Conread position: | 10-329 |
| Cow position: | chr10:14959610-14959932 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 12-337 |
| Cow position: | chr10:29495856-29495537 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 22-352 |
| Cow position: | chr10:17179373-17179023 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 23-321 |
| Cow position: | chr10:28854772-28854479 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 30-338 |
| Cow position: | chr10:69685833-69685530 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 38-256 |
| Cow position: | chr10:66427510-66427731 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 52-337 |
| Cow position: | chr10:63030025-63029748 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 202, 71 |
| Conread position: | 54-360 |
| Cow position: | chr10:592859-592559 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 200, 19 |
| Conread position: | 66-333 |
| Cow position: | chr10:3648734-3648470 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 22 |
| Conread position: | 78-334 |
| Cow position: | chr10:15381441-15381697 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 79-210 |
| Cow position: | chr10:29098806-29098682 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 87-272 |
| Cow position: | chr10:50527705-50527526 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 127, 38 |
| Conread position: | 90-239 |
| Cow position: | chr10:42675495-42675346 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-243 |
| Cow position: | chr10:36474655-36474806 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 90-293 |
| Cow position: | chr10:23734076-23734274 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-331 |
| Cow position: | chr10:34806637-34806405 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 164, 102 |
| Conread position: | 90-336 |
| Cow position: | chr10:46395814-46395577 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:16951160-16951402 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:32981084-32981321 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:52647454-52647692 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:52665469-52665707 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:54966889-54967115 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 90-337 |
| Cow position: | chr10:55917328-55917560 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:62613448-62613212 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 90-337 |
| Cow position: | chr10:63475460-63475225 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 90-338 |
| Cow position: | chr10:19651588-19651343 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 102 |
| Conread position: | 90-338 |
| Cow position: | chr10:58840553-58840803 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 127, 114 |
| Conread position: | 90-345 |
| Cow position: | chr10:68370673-68370928 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 90-358 |
| Cow position: | chr10:726508-726777 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 70 |
| Conread position: | 90-359 |
| Cow position: | chr10:67566870-67567134 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 156 |
| Conread position: | 91-337 |
| Cow position: | chr10:55305429-55305665 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 91-338 |
| Cow position: | chr10:12537795-12537552 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 126, 100 |
| Conread position: | 92-293 |
| Cow position: | chr10:40428533-40428729 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 92-337 |
| Cow position: | chr10:23765502-23765738 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 92-337 |
| Cow position: | chr10:52666811-52666574 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 92-352 |
| Cow position: | chr10:16804360-16804100 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 70, 100 |
| Conread position: | 97-337 |
| Cow position: | chr10:21373079-21372845 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 97-346 |
| Cow position: | chr10:42673566-42673316 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 98-353 |
| Cow position: | chr10:38435331-38435581 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 119, 178 |
| Conread position: | 108-350 |
| Cow position: | chr10:64322639-64322887 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 52, 200 |
| Conread position: | 116-355 |
| Cow position: | chr10:5864025-5863784 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 120-353 |
| Cow position: | chr10:52420894-52421123 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 127-334 |
| Cow position: | chr10:63378527-63378320 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 154 |
| Conread position: | 139-370 |
| Cow position: | chr10:1862082-1861851 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 53 |
Show alignments to all cow chromosomes.