Cow genome map

Conread name: Ss1.1-Pig4-TMW8066A05.3

Conread position: 4-178
Cow position: chr12:32865640-32865817 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 86

Conread position: 9-333
Cow position: chr12:36069407-36069078 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 9-355
Cow position: chr12:31871195-31870844 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 12-333
Cow position: chr12:16908894-16908579 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 52

Conread position: 12-346
Cow position: chr12:45704080-45703746 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 71

Conread position: 19-262
Cow position: chr12:2005031-2005265 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 10

Conread position: 23-328
Cow position: chr12:15131647-15131955 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 8

Conread position: 38-355
Cow position: chr12:42786318-42786014 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 179, 12

Conread position: 44-353
Cow position: chr12:6931870-6931558 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 56

Conread position: 50-353
Cow position: chr12:16081912-16081610 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 9

Conread position: 54-343
Cow position: chr12:26292762-26292475 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 8

Conread position: 54-353
Cow position: chr12:15072970-15072680 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 200, 150

Conread position: 76-333
Cow position: chr12:35638697-35638944 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 24

Conread position: 77-320
Cow position: chr12:26214044-26213798 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 50

Conread position: 77-335
Cow position: chr12:39177725-39177476 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 177, 80

Conread position: 77-343
Cow position: chr12:31608858-31608596 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 233

Conread position: 77-353
Cow position: chr12:8493974-8494257 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 62

Conread position: 78-343
Cow position: chr12:15365749-15365478 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 167, 10

Conread position: 87-293
Cow position: chr12:30231911-30231709 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 158

Conread position: 88-192
Cow position: chr12:23226058-23226162 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 88-370
Cow position: chr12:11213099-11213381 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 71, 88

Conread position: 90-237
Cow position: chr12:9276898-9277045 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 90-239
Cow position: chr12:30446510-30446360 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 90-244
Cow position: chr12:27133405-27133559 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 90-291
Cow position: chr12:9014133-9013940 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 155, 0

Conread position: 90-337
Cow position: chr12:8963568-8963803 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 90-338
Cow position: chr12:4146311-4146066 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 164, 101

Conread position: 91-353
Cow position: chr12:34395467-34395727 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 100

Conread position: 92-328
Cow position: chr12:30531724-30531958 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 129, 86

Conread position: 92-338
Cow position: chr12:34597940-34597700 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 0

Conread position: 94-346
Cow position: chr12:40548957-40549212 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 96-337
Cow position: chr12:36251474-36251703 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 97-358
Cow position: chr12:39115194-39114945 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 124, 94

Conread position: 98-352
Cow position: chr12:20225510-20225756 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 74

Conread position: 100-354
Cow position: chr12:39551765-39552020 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 63, 177

Conread position: 108-339
Cow position: chr12:21268461-21268691 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 83

Conread position: 108-353
Cow position: chr12:41777828-41778069 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 116, 52

Conread position: 110-342
Cow position: chr12:5982366-5982140 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 107, 78

Conread position: 112-343
Cow position: chr12:16352500-16352264 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 144

Conread position: 120-343
Cow position: chr12:42941061-42940838 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 95, 71

Conread position: 140-337
Cow position: chr12:10854123-10854312 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 159, 105

Conread position: 140-342
Cow position: chr12:26174412-26174609 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 53

Show alignments to all cow chromosomes.