Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-333 |
| Cow position: | chr14:12299511-12299841 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 9-333 |
| Cow position: | chr14:45595175-45594860 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 9-337 |
| Cow position: | chr14:14779139-14778804 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 19-336 |
| Cow position: | chr14:25988498-25988819 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 22-346 |
| Cow position: | chr14:31380797-31380472 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 23-327 |
| Cow position: | chr14:46582824-46582516 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 38-333 |
| Cow position: | chr14:46046349-46046056 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 38-343 |
| Cow position: | chr14:44481383-44481095 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 167, 153 |
| Conread position: | 42-197 |
| Cow position: | chr14:42409406-42409562 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 42-345 |
| Cow position: | chr14:46564657-46564959 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 42-346 |
| Cow position: | chr14:25151253-25151571 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 121, 241 |
| Conread position: | 48-333 |
| Cow position: | chr14:29712540-29712256 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 50-229 |
| Cow position: | chr14:46952787-46952961 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 167, 40 |
| Conread position: | 50-333 |
| Cow position: | chr14:48105085-48104808 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 54-352 |
| Cow position: | chr14:25170703-25170403 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 67-333 |
| Cow position: | chr14:35049329-35049591 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 187, 21 |
| Conread position: | 77-337 |
| Cow position: | chr14:12369353-12369611 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 90-208 |
| Cow position: | chr14:10735494-10735612 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-219 |
| Cow position: | chr14:3094706-3094834 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 90-233 |
| Cow position: | chr14:8217402-8217540 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 90-243 |
| Cow position: | chr14:24385733-24385882 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 102 |
| Conread position: | 90-244 |
| Cow position: | chr14:21998512-21998661 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 90-293 |
| Cow position: | chr14:37448109-37447911 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 69, 140 |
| Conread position: | 90-323 |
| Cow position: | chr14:11672409-11672160 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 90-332 |
| Cow position: | chr14:2326578-2326812 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 164, 103 |
| Conread position: | 90-335 |
| Cow position: | chr14:35172773-35172534 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 90-337 |
| Cow position: | chr14:32723825-32724073 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 90-338 |
| Cow position: | chr14:33595212-33595454 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 134, 197 |
| Conread position: | 90-352 |
| Cow position: | chr14:32797728-32797986 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 44 |
| Conread position: | 91-279 |
| Cow position: | chr14:43219979-43219796 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 92-244 |
| Cow position: | chr14:21875407-21875255 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-337 |
| Cow position: | chr14:3332711-3332471 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 157 |
| Conread position: | 95-338 |
| Cow position: | chr14:3925933-3925682 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 100-343 |
| Cow position: | chr14:45572394-45572633 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 117, 91 |
| Conread position: | 102-337 |
| Cow position: | chr14:46398264-46398504 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 197 |
| Conread position: | 108-333 |
| Cow position: | chr14:45763864-45763641 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 150, 54 |
| Conread position: | 108-346 |
| Cow position: | chr14:1479883-1480123 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 163 |
| Conread position: | 110-352 |
| Cow position: | chr14:3168378-3168617 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 107, 81 |
| Conread position: | 121-321 |
| Cow position: | chr14:23312940-23312741 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 123-346 |
| Cow position: | chr14:14643342-14643115 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 182 |
Show alignments to all cow chromosomes.