Cow genome map

Conread name: Ss1.1-Pig4-TMW8066A05.3

Conread position: 9-337
Cow position: chr15:25466414-25466087 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 72

Conread position: 9-338
Cow position: chr15:19728688-19729016 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 23

Conread position: 9-343
Cow position: chr15:33611587-33611932 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 33, 262

Conread position: 9-351
Cow position: chr15:18675528-18675872 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 79

Conread position: 9-352
Cow position: chr15:50442278-50441930 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 12-335
Cow position: chr15:8439426-8439753 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 12-346
Cow position: chr15:45696272-45696612 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 29, 260

Conread position: 19-216
Cow position: chr15:11759719-11759915 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 73

Conread position: 19-245
Cow position: chr15:49130108-49130336 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 10

Conread position: 23-333
Cow position: chr15:44997763-44998078 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 69

Conread position: 42-338
Cow position: chr15:6447171-6447472 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 42-347
Cow position: chr15:1304583-1304280 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 44-343
Cow position: chr15:15632597-15632888 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 150

Conread position: 47-338
Cow position: chr15:16432023-16431732 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 145

Conread position: 50-355
Cow position: chr15:51241111-51241413 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 186

Conread position: 70-343
Cow position: chr15:17189725-17189996 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 74

Conread position: 77-337
Cow position: chr15:45509574-45509834 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 134

Conread position: 87-244
Cow position: chr15:29656650-29656488 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 90-230
Cow position: chr15:29882802-29882662 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 90-243
Cow position: chr15:8439008-8439161 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 90-244
Cow position: chr15:13994736-13994582 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 90-320
Cow position: chr15:34170586-34170363 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 125

Conread position: 90-321
Cow position: chr15:14470781-14471013 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 164, 0

Conread position: 90-327
Cow position: chr15:48107458-48107691 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 156

Conread position: 90-333
Cow position: chr15:17005465-17005224 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 102

Conread position: 90-336
Cow position: chr15:12799344-12799581 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 90-337
Cow position: chr15:18280245-18280009 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 137, 127

Conread position: 90-337
Cow position: chr15:22579416-22579178 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 138

Conread position: 90-337
Cow position: chr15:24399787-24399545 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 155, 0

Conread position: 90-337
Cow position: chr15:42551657-42551412 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 127, 26

Conread position: 90-337
Cow position: chr15:47623154-47623391 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 142, 0

Conread position: 90-338
Cow position: chr15:42659995-42659745 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 101

Conread position: 90-343
Cow position: chr15:22548306-22548060 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 86

Conread position: 90-346
Cow position: chr15:18212830-18213089 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 136

Conread position: 90-346
Cow position: chr15:19934842-19934594 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 154, 0

Conread position: 92-310
Cow position: chr15:35449487-35449707 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 120, 0

Conread position: 92-337
Cow position: chr15:37110274-37110511 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 153, 0

Conread position: 97-333
Cow position: chr15:53189397-53189625 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 97-335
Cow position: chr15:22516634-22516401 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 124

Conread position: 100-354
Cow position: chr15:20128654-20128909 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 177

Conread position: 102-328
Cow position: chr15:50547827-50547597 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 205

Conread position: 108-337
Cow position: chr15:32659982-32660203 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 116-338
Cow position: chr15:8949009-8949230 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 78

Conread position: 123-338
Cow position: chr15:6309488-6309269 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 37, 182

Conread position: 123-346
Cow position: chr15:32432391-32432614 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 83

Conread position: 140-337
Cow position: chr15:33464638-33464838 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 142-350
Cow position: chr15:37755760-37755543 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 169

Conread position: 163-337
Cow position: chr15:3054394-3054222 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 30

Show alignments to all cow chromosomes.