Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 12-333 |
| Cow position: | chr19:54415186-54414862 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 42-220 |
| Cow position: | chr19:7591916-7591746 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-331 |
| Cow position: | chr19:19767027-19766735 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 179, 46 |
| Conread position: | 42-333 |
| Cow position: | chr19:51980261-51979979 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 45-262 |
| Cow position: | chr19:43240245-43240464 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 47-262 |
| Cow position: | chr19:55123692-55123477 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 171, 12 |
| Conread position: | 65-293 |
| Cow position: | chr19:56007534-56007313 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 187, 84 |
| Conread position: | 77-337 |
| Cow position: | chr19:10367227-10366965 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 199 |
| Conread position: | 77-343 |
| Cow position: | chr19:7581665-7581398 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 77-343 |
| Cow position: | chr19:22166023-22165763 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 182 |
| Conread position: | 82-333 |
| Cow position: | chr19:19764457-19764206 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 7 |
| Conread position: | 90-331 |
| Cow position: | chr19:8770861-8770622 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 48 |
| Conread position: | 90-332 |
| Cow position: | chr19:9080476-9080245 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 99 |
| Conread position: | 90-337 |
| Cow position: | chr19:11433808-11434069 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 90-337 |
| Cow position: | chr19:20417781-20417539 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 177, 155 |
| Conread position: | 90-337 |
| Cow position: | chr19:51938674-51938432 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 91-331 |
| Cow position: | chr19:12124638-12124876 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 91-337 |
| Cow position: | chr19:18629101-18628852 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 155 |
| Conread position: | 92-337 |
| Cow position: | chr19:45590456-45590217 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 97-299 |
| Cow position: | chr19:26017638-26017438 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 100-346 |
| Cow position: | chr19:47320978-47321213 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 100-354 |
| Cow position: | chr19:13222933-13223183 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 100-354 |
| Cow position: | chr19:27833242-27833497 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 121-308 |
| Cow position: | chr19:24225875-24225687 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 141-337 |
| Cow position: | chr19:6489252-6489054 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 178 |
Show alignments to all cow chromosomes.