Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8066A05.3
        

               Conread position:
               9-192
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               9-346
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               11-334
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               16-333
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 8
               

               Conread position:
               17-337
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               36, 5
               

               Conread position:
               19-262
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 216
               

               Conread position:
               19-338
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               38-289
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               216, 21
               

               Conread position:
               38-352
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               192, 11
               

               Conread position:
               41-366
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               42-335
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               43-343
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               114, 126
               

               Conread position:
               46-351
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               47-332
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               47-337
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               70-352
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 232
               

               Conread position:
               71-308
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 167
               

               Conread position:
               77-291
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               77-323
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 96
               

               Conread position:
               82-346
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               87-239
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               87-290
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               200, 158
               

               Conread position:
               87-337
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               179, 159
               

               Conread position:
               87-337
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               87-338
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               88-343
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               143, 47
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-262
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               90-293
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-332
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               90-335
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               91, 166
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               211, 155
               

               Conread position:
               90-338
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-338
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 191
               

               Conread position:
               90-341
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               90-343
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               125, 85
               

               Conread position:
               90-351
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               90-352
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               91-218
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-262
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               126, 162
               

               Conread position:
               91-337
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               163, 97
               

               Conread position:
               91-338
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 150
               

               Conread position:
               91-343
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               67, 104
               

               Conread position:
               92-337
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               93-337
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               93-343
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               95-320
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 143
               

               Conread position:
               95-337
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 74
               

               Conread position:
               97-302
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               97-320
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 85
               

               Conread position:
               97-338
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               100-353
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 161
               

               Conread position:
               100-354
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 177
               

               Conread position:
               100-354
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               62, 178
               

               Conread position:
               100-354
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               63, 177
               

               Conread position:
               109-310
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 137
               

               Conread position:
               136-290
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               118, 130
               

               Conread position:
               140-342
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               140-343
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               152-346
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               169-343
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               354-696
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 21
               
Show alignments to all cow chromosomes.