Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-320 |
| Cow position: | chr22:18994045-18993729 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 22, 189 |
| Conread position: | 9-338 |
| Cow position: | chr22:674749-674420 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 12-337 |
| Cow position: | chr22:17926392-17926717 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 20-338 |
| Cow position: | chr22:27748215-27747894 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 47-352 |
| Cow position: | chr22:35530841-35531146 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 49-338 |
| Cow position: | chr22:19093366-19093079 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 59-229 |
| Cow position: | chr22:28401539-28401373 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 70-255 |
| Cow position: | chr22:8133517-8133702 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 117, 131 |
| Conread position: | 70-337 |
| Cow position: | chr22:8121291-8121551 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 77-353 |
| Cow position: | chr22:2002362-2002081 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 90-282 |
| Cow position: | chr22:10627629-10627437 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 122, 172 |
| Conread position: | 90-332 |
| Cow position: | chr22:2941761-2941995 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-332 |
| Cow position: | chr22:8033461-8033695 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-332 |
| Cow position: | chr22:8040703-8040931 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 90-332 |
| Cow position: | chr22:41685187-41685424 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 177, 156 |
| Conread position: | 90-335 |
| Cow position: | chr22:31381268-31381506 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 156 |
| Conread position: | 90-335 |
| Cow position: | chr22:41501157-41501397 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 90-337 |
| Cow position: | chr22:302825-303068 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 163, 101 |
| Conread position: | 90-337 |
| Cow position: | chr22:735145-734907 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 179, 138 |
| Conread position: | 90-337 |
| Cow position: | chr22:12677649-12677410 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 148 |
| Conread position: | 90-337 |
| Cow position: | chr22:27076951-27076712 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 90-337 |
| Cow position: | chr22:30912148-30911906 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 90-338 |
| Cow position: | chr22:19971092-19971342 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 90-339 |
| Cow position: | chr22:17310502-17310754 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 90-342 |
| Cow position: | chr22:1610972-1610725 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 90-352 |
| Cow position: | chr22:6438078-6437818 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 101 |
| Conread position: | 91-338 |
| Cow position: | chr22:2527214-2527458 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 92-333 |
| Cow position: | chr22:13928954-13928709 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 234 |
| Conread position: | 92-351 |
| Cow position: | chr22:23842301-23842050 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 92-353 |
| Cow position: | chr22:6702832-6702568 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 223 |
| Conread position: | 93-332 |
| Cow position: | chr22:744083-743856 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 99-293 |
| Cow position: | chr22:13956328-13956519 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 148 |
| Conread position: | 99-320 |
| Cow position: | chr22:39459026-39459248 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 180 |
| Conread position: | 108-346 |
| Cow position: | chr22:311456-311714 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 108-358 |
| Cow position: | chr22:4997833-4998083 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 118-299 |
| Cow position: | chr22:12752628-12752811 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 159 |
| Conread position: | 120-320 |
| Cow position: | chr22:18698493-18698695 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 123-346 |
| Cow position: | chr22:2377054-2376827 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 182 |
| Conread position: | 123-346 |
| Cow position: | chr22:3420958-3421185 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 182 |
| Conread position: | 125-335 |
| Cow position: | chr22:44457490-44457288 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 130-344 |
| Cow position: | chr22:42035552-42035773 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 140-333 |
| Cow position: | chr22:17874207-17874014 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 114, 125 |
Show alignments to all cow chromosomes.