Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 8-333 |
| Cow position: | chr24:27254355-27254030 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 9-337 |
| Cow position: | chr24:6089243-6088914 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 9-338 |
| Cow position: | chr24:17844863-17845198 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 38-333 |
| Cow position: | chr24:26680257-26680543 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 40-353 |
| Cow position: | chr24:31203740-31204053 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 42-329 |
| Cow position: | chr24:42009342-42009055 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 44-337 |
| Cow position: | chr24:6073608-6073315 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 47-333 |
| Cow position: | chr24:27333161-27332882 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 77-342 |
| Cow position: | chr24:319193-318920 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 77-342 |
| Cow position: | chr24:29355983-29356249 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 88-230 |
| Cow position: | chr24:17972970-17973113 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 90-234 |
| Cow position: | chr24:2121231-2121087 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-337 |
| Cow position: | chr24:36906134-36906377 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 91-337 |
| Cow position: | chr24:23686641-23686405 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 94-343 |
| Cow position: | chr24:35553041-35553282 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 130, 6 |
| Conread position: | 97-300 |
| Cow position: | chr24:40524063-40524263 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 97-337 |
| Cow position: | chr24:9096117-9096349 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 99-337 |
| Cow position: | chr24:245945-246173 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 100-331 |
| Cow position: | chr24:36836436-36836206 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 77 |
| Conread position: | 100-346 |
| Cow position: | chr24:5917351-5917598 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 177 |
| Conread position: | 108-353 |
| Cow position: | chr24:2448324-2448078 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 120-244 |
| Cow position: | chr24:20260349-20260225 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-332 |
| Cow position: | chr24:9166998-9167200 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 153-346 |
| Cow position: | chr24:26874448-26874642 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 5, 27 |
| Conread position: | 203-354 |
| Cow position: | chr24:33445864-33445712 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 114 |
Show alignments to all cow chromosomes.