Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8066A05.3 |
| Conread position: | 9-333 |
| Cow position: | chr25:15479496-15479822 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 9-333 |
| Cow position: | chr25:15632346-15632670 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 19-153 |
| Cow position: | chr25:6565782-6565919 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 38-336 |
| Cow position: | chr25:6257217-6257517 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 42-335 |
| Cow position: | chr25:22272247-22271952 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 46 |
| Conread position: | 42-342 |
| Cow position: | chr25:31580511-31580213 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 45-337 |
| Cow position: | chr25:29816659-29816954 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 50-217 |
| Cow position: | chr25:20247879-20248047 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 65-320 |
| Cow position: | chr25:22265557-22265810 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 71-343 |
| Cow position: | chr25:17374275-17374542 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 182, 136 |
| Conread position: | 73-210 |
| Cow position: | chr25:23677573-23677710 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-329 |
| Cow position: | chr25:5868489-5868750 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 87-338 |
| Cow position: | chr25:6261534-6261778 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 130, 197 |
| Conread position: | 90-263 |
| Cow position: | chr25:41167701-41167874 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 90-302 |
| Cow position: | chr25:7668302-7668095 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-332 |
| Cow position: | chr25:4498653-4498420 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 90-336 |
| Cow position: | chr25:5899177-5899411 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 170, 32 |
| Conread position: | 90-337 |
| Cow position: | chr25:8556832-8556593 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-343 |
| Cow position: | chr25:26100103-26099844 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 257 |
| Conread position: | 91-331 |
| Cow position: | chr25:18679482-18679244 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 163, 99 |
| Conread position: | 92-329 |
| Cow position: | chr25:15914738-15914978 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 94-343 |
| Cow position: | chr25:9597692-9597445 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 121, 98 |
| Conread position: | 100-357 |
| Cow position: | chr25:19017839-19017580 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 204 |
| Conread position: | 116-352 |
| Cow position: | chr25:15961099-15960865 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 138, 56 |
| Conread position: | 117-331 |
| Cow position: | chr25:41328427-41328634 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 119-346 |
| Cow position: | chr25:31367959-31368193 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 44, 189 |
| Conread position: | 123-346 |
| Cow position: | chr25:15966547-15966319 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 143-290 |
| Cow position: | chr25:6565945-6566097 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.